Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 Y_RNA.243-201ENST00000364481 109 ntBASIC1.33□□□□□ -2.2
SNRNP40Q96DI7 Y_RNA.267-201ENST00000364679 109 ntBASIC1.33□□□□□ -2.2
SNRNP40Q96DI7 RNU5E-4P-201ENST00000364931 120 ntBASIC1.33□□□□□ -2.2
SNRNP40Q96DI7 RNU6-867P-201ENST00000364956 107 ntBASIC1.33□□□□□ -2.2
SNRNP40Q96DI7 Y_RNA.395-201ENST00000383945 109 ntBASIC1.33□□□□□ -2.2
SNRNP40Q96DI7 MIR628-201ENST00000385229 95 ntBASIC1.33□□□□□ -2.2
SNRNP40Q96DI7 AC022028.1-201ENST00000412054 408 ntBASIC1.33□□□□□ -2.2
SNRNP40Q96DI7 Y_RNA.675-201ENST00000516389 149 ntBASIC1.33□□□□□ -2.2
SNRNP40Q96DI7 AC055872.1-201ENST00000570978 278 ntBASIC1.33□□□□□ -2.2
SNRNP40Q96DI7 MIR8065-201ENST00000620577 100 ntBASIC1.33□□□□□ -2.2
SNRNP40Q96DI7 U6.92-201ENST00000636464 89 ntBASIC1.33□□□□□ -2.2
SNRNP40Q96DI7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SNRNP40Q96DI7 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
SNRNP40Q96DI7 SNORD114-7-201ENST00000362520 77 ntBASIC1.32□□□□□ -2.2
SNRNP40Q96DI7 Y_RNA.197-201ENST00000364004 102 ntBASIC1.32□□□□□ -2.2
SNRNP40Q96DI7 RNU6-53P-201ENST00000365367 106 ntBASIC1.32□□□□□ -2.2
SNRNP40Q96DI7 MIR1304-201ENST00000408243 91 ntBASIC1.32□□□□□ -2.2
SNRNP40Q96DI7 RPL30P13-201ENST00000418873 348 ntBASIC1.32□□□□□ -2.2
SNRNP40Q96DI7 RNU6-408P-201ENST00000515910 100 ntBASIC1.32□□□□□ -2.2
SNRNP40Q96DI7 RNU4-77P-201ENST00000516692 156 ntBASIC1.32□□□□□ -2.2
SNRNP40Q96DI7 RNU2-12P-201ENST00000517216 168 ntBASIC1.32□□□□□ -2.2
SNRNP40Q96DI7 AC006600.1-201ENST00000572529 153 ntBASIC1.32□□□□□ -2.2
SNRNP40Q96DI7 AL138825.1-201ENST00000618587 192 ntBASIC1.32□□□□□ -2.2
SNRNP40Q96DI7 AL513423.1-201ENST00000621695 132 ntBASIC1.32□□□□□ -2.2
SNRNP40Q96DI7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.32□□□□□ -2.2
SNRNP40Q96DI7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SNRNP40Q96DI7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 SNORD42.2-201ENST00000365570 69 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 Y_RNA.431-201ENST00000384086 102 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 RNU6-42P-201ENST00000384165 107 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 RNU6-708P-201ENST00000384217 107 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 MIR873-201ENST00000401120 77 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 SDAD1P3-201ENST00000427380 333 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 AL137792.2-201ENST00000443484 235 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 Y_RNA.639-201ENST00000458981 102 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 RPL30P7-201ENST00000479312 323 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 RN7SKP88-201ENST00000516847 250 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 AL512310.8-201ENST00000550183 120 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 CYP3A52P-201ENST00000563326 91 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 AC092447.9-201ENST00000603395 144 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 AL078603.1-201ENST00000603824 313 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 AL080274.1-201ENST00000605565 220 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 7SK.8-201ENST00000612110 250 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 7SK.11-201ENST00000615477 250 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 7SK.13-201ENST00000622040 250 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 AC127459.3-201ENST00000624328 466 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 AL606534.2-204ENST00000635008 178 ntBASIC1.31□□□□□ -2.2
SNRNP40Q96DI7 Y_RNA.39-201ENST00000362620 98 ntBASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 SNORD115-30-201ENST00000364117 82 ntBASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 SNORD114-22-201ENST00000365423 72 ntBASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 AC091021.1-201ENST00000468051 388 ntBASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 SNORA40.14-201ENST00000516543 86 ntBASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 AC023442.1-201ENST00000531247 422 ntBASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 MIR4659A-201ENST00000580269 81 ntBASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 MIR5188-201ENST00000583467 113 ntBASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 AL390123.1-201ENST00000603216 237 ntBASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 AC006380.1-201ENST00000603598 186 ntBASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 AC136443.5-201ENST00000603741 370 ntBASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 SNORD58B-201ENST00000607313 66 ntBASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 AL050343.2-201ENST00000607338 280 ntBASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 MIR6078-201ENST00000611069 100 ntBASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 AC240442.1-201ENST00000616055 283 ntBASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 AC010205.1-201ENST00000616668 449 ntBASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 uc_338.22-201ENST00000622722 187 ntBASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 AC106754.2-201ENST00000623006 233 ntBASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SNRNP40Q96DI7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 RNU4-76P-201ENST00000364509 141 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 SNORA25.8-201ENST00000364831 128 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 RNU6-117P-201ENST00000365415 107 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 SNORD26-201ENST00000384147 75 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 SNORA12.1-201ENST00000390873 148 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 RNU2-54P-201ENST00000410299 190 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 Y_RNA.604-201ENST00000410574 102 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 RN7SKP51-201ENST00000410781 304 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 AC233266.1-201ENST00000454518 96 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 RNU6-1170P-201ENST00000515974 106 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 Y_RNA.661-201ENST00000516003 99 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 RNU6-475P-201ENST00000516073 104 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 RNA5SP220-201ENST00000516298 104 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 RNU7-28P-201ENST00000516759 62 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 AP002004.2-201ENST00000531656 154 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 AC019288.1-201ENST00000557918 224 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 AC242852.1-201ENST00000612151 96 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 AC011476.5-201ENST00000615594 130 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 AC004467.1-201ENST00000615678 330 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 AC244015.1-201ENST00000622301 99 ntBASIC1.29□□□□□ -2.2
SNRNP40Q96DI7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SNRNP40Q96DI7 Y_RNA.101-201ENST00000363154 102 ntBASIC1.28□□□□□ -2.2
SNRNP40Q96DI7 Y_RNA.124-201ENST00000363339 93 ntBASIC1.28□□□□□ -2.2
SNRNP40Q96DI7 Y_RNA.230-201ENST00000364348 109 ntBASIC1.28□□□□□ -2.2
SNRNP40Q96DI7 RNU6-20P-201ENST00000384106 107 ntBASIC1.28□□□□□ -2.2
SNRNP40Q96DI7 MIR660-201ENST00000385235 97 ntBASIC1.28□□□□□ -2.2
SNRNP40Q96DI7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
SNRNP40Q96DI7 RNU6-1199P-201ENST00000411249 104 ntBASIC1.28□□□□□ -2.2
SNRNP40Q96DI7 AL160004.2-201ENST00000432935 350 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms