Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MTND5P20-201ENST00000448677 143 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 AC093850.1-201ENST00000454121 251 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 snoU13.26-201ENST00000459452 105 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 AL133373.1-201ENST00000497098 94 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 SNORA31.4-201ENST00000516049 129 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 RN7SKP295-201ENST00000517264 153 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 AL117336.2-201ENST00000602435 335 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 AL022345.2-201ENST00000606307 135 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 AC010205.1-201ENST00000616668 449 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 AC027335.2-201ENST00000624030 375 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
VPS33AQ96AX1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
VPS33AQ96AX1 RNU6-324P-201ENST00000363957 106 ntBASIC1.24□□□□□ -2.21
VPS33AQ96AX1 U8.5-201ENST00000364528 136 ntBASIC1.24□□□□□ -2.21
VPS33AQ96AX1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
VPS33AQ96AX1 SNORA67.5-201ENST00000391036 107 ntBASIC1.24□□□□□ -2.21
VPS33AQ96AX1 AL390729.2-201ENST00000416137 156 ntBASIC1.24□□□□□ -2.21
VPS33AQ96AX1 AC096644.2-201ENST00000429278 159 ntBASIC1.24□□□□□ -2.21
VPS33AQ96AX1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.24□□□□□ -2.21
VPS33AQ96AX1 RNU1-123P-201ENST00000458950 160 ntBASIC1.24□□□□□ -2.21
VPS33AQ96AX1 U8.19-201ENST00000459095 133 ntBASIC1.24□□□□□ -2.21
VPS33AQ96AX1 AC004223.1-201ENST00000479840 271 ntBASIC1.24□□□□□ -2.21
VPS33AQ96AX1 SNORD116-28-201ENST00000516123 91 ntBASIC1.24□□□□□ -2.21
VPS33AQ96AX1 RNU6-436P-201ENST00000516171 114 ntBASIC1.24□□□□□ -2.21
VPS33AQ96AX1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.24□□□□□ -2.21
VPS33AQ96AX1 AC120024.3-201ENST00000603167 156 ntBASIC1.24□□□□□ -2.21
VPS33AQ96AX1 BX284668.6-201ENST00000606899 438 ntBASIC1.24□□□□□ -2.21
VPS33AQ96AX1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
VPS33AQ96AX1 RNU1-115P-201ENST00000365329 160 ntBASIC1.23□□□□□ -2.21
VPS33AQ96AX1 RNU6-708P-201ENST00000384217 107 ntBASIC1.23□□□□□ -2.21
VPS33AQ96AX1 SNORD116-13-201ENST00000384408 92 ntBASIC1.23□□□□□ -2.21
VPS33AQ96AX1 Y_RNA.570-201ENST00000384750 101 ntBASIC1.23□□□□□ -2.21
VPS33AQ96AX1 RNU6-710P-201ENST00000410424 105 ntBASIC1.23□□□□□ -2.21
VPS33AQ96AX1 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
VPS33AQ96AX1 RNU7-40P-201ENST00000516397 64 ntBASIC1.23□□□□□ -2.21
VPS33AQ96AX1 RNU6-548P-201ENST00000517083 115 ntBASIC1.23□□□□□ -2.21
VPS33AQ96AX1 AC090821.2-201ENST00000523552 176 ntBASIC1.23□□□□□ -2.21
VPS33AQ96AX1 MIR4423-201ENST00000580922 80 ntBASIC1.23□□□□□ -2.21
VPS33AQ96AX1 MIR548S-201ENST00000581352 82 ntBASIC1.23□□□□□ -2.21
VPS33AQ96AX1 MIR4762-201ENST00000585261 75 ntBASIC1.23□□□□□ -2.21
VPS33AQ96AX1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS33AQ96AX1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS33AQ96AX1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
VPS33AQ96AX1 Y_RNA.39-201ENST00000362620 98 ntBASIC1.22□□□□□ -2.21
VPS33AQ96AX1 Y_RNA.252-201ENST00000364556 101 ntBASIC1.22□□□□□ -2.21
VPS33AQ96AX1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS33AQ96AX1 AC005042.3-201ENST00000453230 174 ntBASIC1.22□□□□□ -2.21
VPS33AQ96AX1 RPL39P39-201ENST00000455840 151 ntBASIC1.22□□□□□ -2.21
VPS33AQ96AX1 RPS23P4-201ENST00000487908 423 ntBASIC1.22□□□□□ -2.21
VPS33AQ96AX1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS33AQ96AX1 SNORA31.2-201ENST00000516019 134 ntBASIC1.22□□□□□ -2.21
VPS33AQ96AX1 RNU6-976P-201ENST00000516086 111 ntBASIC1.22□□□□□ -2.21
VPS33AQ96AX1 Y_RNA.702-201ENST00000516843 96 ntBASIC1.22□□□□□ -2.21
VPS33AQ96AX1 RNA5SP404-201ENST00000517118 132 ntBASIC1.22□□□□□ -2.21
VPS33AQ96AX1 SNORA70.22-201ENST00000517160 124 ntBASIC1.22□□□□□ -2.21
VPS33AQ96AX1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.22□□□□□ -2.21
VPS33AQ96AX1 AC011604.1-201ENST00000545978 196 ntBASIC1.22□□□□□ -2.21
VPS33AQ96AX1 AC004832.4-201ENST00000608952 331 ntBASIC1.22□□□□□ -2.21
VPS33AQ96AX1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.22□□□□□ -2.21
VPS33AQ96AX1 RNU4-79P-201ENST00000362764 141 ntBASIC1.21□□□□□ -2.22
VPS33AQ96AX1 RNU1-124P-201ENST00000363861 145 ntBASIC1.21□□□□□ -2.22
VPS33AQ96AX1 RNU6-1080P-201ENST00000383982 107 ntBASIC1.21□□□□□ -2.22
VPS33AQ96AX1 Y_RNA.462-201ENST00000384268 102 ntBASIC1.21□□□□□ -2.22
VPS33AQ96AX1 RNU6-163P-201ENST00000384396 106 ntBASIC1.21□□□□□ -2.22
VPS33AQ96AX1 Y_RNA.529-201ENST00000384586 119 ntBASIC1.21□□□□□ -2.22
VPS33AQ96AX1 Y_RNA.621-201ENST00000411065 96 ntBASIC1.21□□□□□ -2.22
VPS33AQ96AX1 MCFD2P1-201ENST00000417812 300 ntBASIC1.21□□□□□ -2.22
VPS33AQ96AX1 AC245047.7-201ENST00000440265 293 ntBASIC1.21□□□□□ -2.22
VPS33AQ96AX1 RPEP5-201ENST00000441137 268 ntBASIC1.21□□□□□ -2.22
VPS33AQ96AX1 SNORA40.14-201ENST00000516543 86 ntBASIC1.21□□□□□ -2.22
VPS33AQ96AX1 DNAJC19P9-201ENST00000555084 351 ntBASIC1.21□□□□□ -2.22
VPS33AQ96AX1 AC005972.2-201ENST00000604690 348 ntBASIC1.21□□□□□ -2.22
VPS33AQ96AX1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS33AQ96AX1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
VPS33AQ96AX1 SNORD68-201ENST00000363214 84 ntBASIC1.2□□□□□ -2.22
VPS33AQ96AX1 RNU6-1175P-201ENST00000365200 107 ntBASIC1.2□□□□□ -2.22
VPS33AQ96AX1 Y_RNA.356-201ENST00000365475 113 ntBASIC1.2□□□□□ -2.22
VPS33AQ96AX1 Y_RNA.496-201ENST00000384444 101 ntBASIC1.2□□□□□ -2.22
VPS33AQ96AX1 SNORD12-201ENST00000391002 90 ntBASIC1.2□□□□□ -2.22
VPS33AQ96AX1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS33AQ96AX1 AC104332.1-201ENST00000440471 797 ntBASIC1.2□□□□□ -2.22
VPS33AQ96AX1 AC092447.9-201ENST00000603395 144 ntBASIC1.2□□□□□ -2.22
VPS33AQ96AX1 Y_RNA.772-201ENST00000606692 102 ntBASIC1.2□□□□□ -2.22
VPS33AQ96AX1 AL050343.2-201ENST00000607338 280 ntBASIC1.2□□□□□ -2.22
VPS33AQ96AX1 AL591926.4-201ENST00000616895 298 ntBASIC1.2□□□□□ -2.22
VPS33AQ96AX1 SNORA72-201ENST00000384339 132 ntBASIC1.19□□□□□ -2.22
VPS33AQ96AX1 MIR526A1-201ENST00000384897 85 ntBASIC1.19□□□□□ -2.22
VPS33AQ96AX1 MIR222-201ENST00000384992 110 ntBASIC1.19□□□□□ -2.22
VPS33AQ96AX1 MIR452-201ENST00000385020 85 ntBASIC1.19□□□□□ -2.22
VPS33AQ96AX1 SNORA17.3-201ENST00000391159 129 ntBASIC1.19□□□□□ -2.22
VPS33AQ96AX1 RPL23AP36-201ENST00000413895 458 ntBASIC1.19□□□□□ -2.22
VPS33AQ96AX1 AF228730.4-201ENST00000421457 183 ntBASIC1.19□□□□□ -2.22
VPS33AQ96AX1 LINC01399-202ENST00000458450 244 ntBASIC1.19□□□□□ -2.22
VPS33AQ96AX1 AC048334.1-201ENST00000477975 159 ntBASIC1.19□□□□□ -2.22
VPS33AQ96AX1 RNU6-966P-201ENST00000516479 104 ntBASIC1.19□□□□□ -2.22
VPS33AQ96AX1 RNU6-1116P-201ENST00000517269 99 ntBASIC1.19□□□□□ -2.22
VPS33AQ96AX1 ZNF209P-201ENST00000593450 2304 ntBASIC1.19□□□□□ -2.22
VPS33AQ96AX1 AL121655.1-201ENST00000605811 308 ntBASIC1.19□□□□□ -2.22
VPS33AQ96AX1 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 247.1 ms