Protein–RNA interactions for Protein: Q969G2

LHX4, LIM/homeobox protein Lhx4, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4Q969G2 SNORD116.3-201ENST00000517176 78 ntBASIC1.14□□□□□ -2.23
LHX4Q969G2 AL358944.1-201ENST00000528537 144 ntBASIC1.14□□□□□ -2.23
LHX4Q969G2 AC006600.1-201ENST00000572529 153 ntBASIC1.14□□□□□ -2.23
LHX4Q969G2 MIR4778-201ENST00000577635 80 ntBASIC1.14□□□□□ -2.23
LHX4Q969G2 AC006380.1-201ENST00000603598 186 ntBASIC1.14□□□□□ -2.23
LHX4Q969G2 AC091925.1-201ENST00000623204 462 ntBASIC1.14□□□□□ -2.23
LHX4Q969G2 MIR4272-201ENST00000635924 64 ntBASIC1.14□□□□□ -2.23
LHX4Q969G2 AC112487.2-201ENST00000637950 304 ntBASIC1.14□□□□□ -2.23
LHX4Q969G2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
LHX4Q969G2 RNU6-626P-201ENST00000363354 107 ntBASIC1.13□□□□□ -2.23
LHX4Q969G2 Y_RNA.496-201ENST00000384444 101 ntBASIC1.13□□□□□ -2.23
LHX4Q969G2 RNU6-939P-201ENST00000384634 107 ntBASIC1.13□□□□□ -2.23
LHX4Q969G2 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
LHX4Q969G2 RNA5SP482-201ENST00000391269 118 ntBASIC1.13□□□□□ -2.23
LHX4Q969G2 U8.16-201ENST00000391279 133 ntBASIC1.13□□□□□ -2.23
LHX4Q969G2 RNU6-1199P-201ENST00000411249 104 ntBASIC1.13□□□□□ -2.23
LHX4Q969G2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.13□□□□□ -2.23
LHX4Q969G2 AF228730.4-201ENST00000421457 183 ntBASIC1.13□□□□□ -2.23
LHX4Q969G2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.13□□□□□ -2.23
LHX4Q969G2 HSPE1P13-201ENST00000451143 297 ntBASIC1.13□□□□□ -2.23
LHX4Q969G2 TRMT112P2-201ENST00000512910 132 ntBASIC1.13□□□□□ -2.23
LHX4Q969G2 RNU6-1337P-201ENST00000516525 95 ntBASIC1.13□□□□□ -2.23
LHX4Q969G2 AL359821.1-201ENST00000605519 182 ntBASIC1.13□□□□□ -2.23
LHX4Q969G2 AC106754.2-201ENST00000623006 233 ntBASIC1.13□□□□□ -2.23
LHX4Q969G2 AC005592.1-201ENST00000566527 1640 ntBASIC1.13□□□□□ -2.23
LHX4Q969G2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
LHX4Q969G2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
LHX4Q969G2 Y_RNA.146-201ENST00000363549 102 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 Y_RNA.446-201ENST00000384178 104 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 RNU6-136P-201ENST00000384663 107 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 RNA5SP511-201ENST00000410487 115 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 RNU2-61P-201ENST00000411069 191 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 AL354751.2-201ENST00000415471 210 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.12□□□□□ -2.23
LHX4Q969G2 AC236972.2-201ENST00000434979 310 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 AL162725.1-201ENST00000435405 301 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 AC233266.1-201ENST00000454518 96 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 AC005840.1-201ENST00000498412 377 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 RNU6-966P-201ENST00000516479 104 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 RN7SKP88-201ENST00000516847 250 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 RNU6-165P-201ENST00000517170 99 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 7SK.8-201ENST00000612110 250 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 AC242852.1-201ENST00000612151 96 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 7SK.11-201ENST00000615477 250 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 MIR8065-201ENST00000620577 100 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 7SK.13-201ENST00000622040 250 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 AC244015.1-201ENST00000622301 99 ntBASIC1.12□□□□□ -2.23
LHX4Q969G2 MIRLET7C-201ENST00000362160 84 ntBASIC1.11□□□□□ -2.23
LHX4Q969G2 RNU6-199P-201ENST00000362954 107 ntBASIC1.11□□□□□ -2.23
LHX4Q969G2 Y_RNA.230-201ENST00000364348 109 ntBASIC1.11□□□□□ -2.23
LHX4Q969G2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.11□□□□□ -2.23
LHX4Q969G2 MIR653-201ENST00000385279 96 ntBASIC1.11□□□□□ -2.23
LHX4Q969G2 RNU6-321P-201ENST00000410912 106 ntBASIC1.11□□□□□ -2.23
LHX4Q969G2 RNU6-155P-201ENST00000516347 100 ntBASIC1.11□□□□□ -2.23
LHX4Q969G2 RNU6-922P-201ENST00000516753 99 ntBASIC1.11□□□□□ -2.23
LHX4Q969G2 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.11□□□□□ -2.23
LHX4Q969G2 AL513534.2-201ENST00000603836 250 ntBASIC1.11□□□□□ -2.23
LHX4Q969G2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.11□□□□□ -2.23
LHX4Q969G2 AL353770.2-201ENST00000620024 78 ntBASIC1.11□□□□□ -2.23
LHX4Q969G2 AC104985.2-201ENST00000620598 500 ntBASIC1.11□□□□□ -2.23
LHX4Q969G2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
LHX4Q969G2 Y_RNA.4-201ENST00000362333 112 ntBASIC1.1□□□□□ -2.23
LHX4Q969G2 Y_RNA.58-201ENST00000362807 102 ntBASIC1.1□□□□□ -2.23
LHX4Q969G2 Y_RNA.154-201ENST00000363624 102 ntBASIC1.1□□□□□ -2.23
LHX4Q969G2 RNU4-41P-201ENST00000364426 143 ntBASIC1.1□□□□□ -2.23
LHX4Q969G2 Y_RNA.252-201ENST00000364556 101 ntBASIC1.1□□□□□ -2.23
LHX4Q969G2 RNY3P1-201ENST00000365085 102 ntBASIC1.1□□□□□ -2.23
LHX4Q969G2 RNY3-201ENST00000365484 102 ntBASIC1.1□□□□□ -2.23
LHX4Q969G2 SNORD116-13-201ENST00000384408 92 ntBASIC1.1□□□□□ -2.23
LHX4Q969G2 MIR758-201ENST00000390227 88 ntBASIC1.1□□□□□ -2.23
LHX4Q969G2 RPS4XP11-201ENST00000446897 772 ntBASIC1.1□□□□□ -2.23
LHX4Q969G2 AL049830.1-201ENST00000468034 425 ntBASIC1.1□□□□□ -2.23
LHX4Q969G2 MTND3P22-201ENST00000510932 243 ntBASIC1.1□□□□□ -2.23
LHX4Q969G2 AC092447.9-201ENST00000603395 144 ntBASIC1.1□□□□□ -2.23
LHX4Q969G2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.1□□□□□ -2.23
LHX4Q969G2 MIR337-201ENST00000362281 93 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 Y_RNA.5-201ENST00000362334 102 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 RNA5SP327-201ENST00000362494 101 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 RNU1-115P-201ENST00000365329 160 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 SNORA70.7-201ENST00000384159 133 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 Y_RNA.570-201ENST00000384750 101 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 SNORD41-201ENST00000386967 70 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 Z98949.2-201ENST00000440996 144 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 RPEP5-201ENST00000441137 268 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 AC093850.1-201ENST00000454121 251 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 RNU1-123P-201ENST00000458950 160 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.09□□□□□ -2.23
LHX4Q969G2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.09□□□□□ -2.23
LHX4Q969G2 RNU6-976P-201ENST00000516086 111 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 RNU6-436P-201ENST00000516171 114 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 RNU6-917P-201ENST00000516294 104 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 Y_RNA.676-201ENST00000516393 96 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 RNU4-77P-201ENST00000516692 156 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 MIR4423-201ENST00000580922 80 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 MIR5188-201ENST00000583467 113 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 MIR4781-201ENST00000585250 76 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 AC022441.3-201ENST00000605737 136 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 AC010205.1-201ENST00000616668 449 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 AC068647.2-201ENST00000637380 353 ntBASIC1.09□□□□□ -2.23
LHX4Q969G2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.09□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 1336.4 ms