Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.69□□□□□ -1.98
RTF1Q92541 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.69□□□□□ -1.98
RTF1Q92541 AC072026.1-201ENST00000605023 201 ntBASIC2.69□□□□□ -1.98
RTF1Q92541 MIR6895-201ENST00000613497 78 ntBASIC2.69□□□□□ -1.98
RTF1Q92541 Y_RNA.783-201ENST00000613546 102 ntBASIC2.69□□□□□ -1.98
RTF1Q92541 ZNF720P1-201ENST00000562403 1939 ntBASIC2.69□□□□□ -1.98
RTF1Q92541 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RTF1Q92541 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RTF1Q92541 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.68□□□□□ -1.98
RTF1Q92541 RNU2-2P-201ENST00000410396 191 ntBASIC2.68□□□□□ -1.98
RTF1Q92541 AL353689.1-201ENST00000438895 199 ntBASIC2.68□□□□□ -1.98
RTF1Q92541 AC104332.1-201ENST00000440471 797 ntBASIC2.68□□□□□ -1.98
RTF1Q92541 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.68□□□□□ -1.98
RTF1Q92541 RNU7-26P-201ENST00000458980 63 ntBASIC2.68□□□□□ -1.98
RTF1Q92541 AC104435.1-201ENST00000483483 166 ntBASIC2.68□□□□□ -1.98
RTF1Q92541 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.68□□□□□ -1.98
RTF1Q92541 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.68□□□□□ -1.98
RTF1Q92541 RNU6-1146P-201ENST00000516282 102 ntBASIC2.68□□□□□ -1.98
RTF1Q92541 MIR5694-201ENST00000581190 76 ntBASIC2.68□□□□□ -1.98
RTF1Q92541 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.68□□□□□ -1.98
RTF1Q92541 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.68□□□□□ -1.98
RTF1Q92541 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RTF1Q92541 Y_RNA.172-201ENST00000363765 102 ntBASIC2.67□□□□□ -1.98
RTF1Q92541 Y_RNA.180-201ENST00000363867 113 ntBASIC2.67□□□□□ -1.98
RTF1Q92541 Y_RNA.270-201ENST00000364693 104 ntBASIC2.67□□□□□ -1.98
RTF1Q92541 Y_RNA.308-201ENST00000365043 101 ntBASIC2.67□□□□□ -1.98
RTF1Q92541 RNU1-52P-201ENST00000384190 164 ntBASIC2.67□□□□□ -1.98
RTF1Q92541 RNU4-70P-201ENST00000384579 139 ntBASIC2.67□□□□□ -1.98
RTF1Q92541 RNU6-918P-201ENST00000391219 106 ntBASIC2.67□□□□□ -1.98
RTF1Q92541 MTCO2P33-201ENST00000402100 465 ntBASIC2.67□□□□□ -1.98
RTF1Q92541 AC060773.1-201ENST00000421698 310 ntBASIC2.67□□□□□ -1.98
RTF1Q92541 AC245102.2-201ENST00000448956 180 ntBASIC2.67□□□□□ -1.98
RTF1Q92541 RNU7-141P-201ENST00000459304 62 ntBASIC2.67□□□□□ -1.98
RTF1Q92541 RPS27P22-201ENST00000478056 241 ntBASIC2.67□□□□□ -1.98
RTF1Q92541 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.67□□□□□ -1.98
RTF1Q92541 AC107393.1-201ENST00000512403 346 ntBASIC2.67□□□□□ -1.98
RTF1Q92541 AC027419.1-201ENST00000522976 328 ntBASIC2.67□□□□□ -1.98
RTF1Q92541 AL137100.2-201ENST00000555786 315 ntBASIC2.67□□□□□ -1.98
RTF1Q92541 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
RTF1Q92541 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.67□□□□□ -1.98
RTF1Q92541 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.66□□□□□ -1.98
RTF1Q92541 RNU6-1048P-201ENST00000364054 107 ntBASIC2.66□□□□□ -1.98
RTF1Q92541 RNU6-117P-201ENST00000365415 107 ntBASIC2.66□□□□□ -1.98
RTF1Q92541 RNU6-47P-201ENST00000383866 107 ntBASIC2.66□□□□□ -1.98
RTF1Q92541 RNU6-1323P-201ENST00000384025 107 ntBASIC2.66□□□□□ -1.98
RTF1Q92541 RNU6-886P-201ENST00000384319 105 ntBASIC2.66□□□□□ -1.98
RTF1Q92541 RNU6-160P-201ENST00000384591 107 ntBASIC2.66□□□□□ -1.98
RTF1Q92541 MIR1253-201ENST00000408273 105 ntBASIC2.66□□□□□ -1.98
RTF1Q92541 MIR1262-201ENST00000408276 93 ntBASIC2.66□□□□□ -1.98
RTF1Q92541 AC100767.1-201ENST00000528178 123 ntBASIC2.66□□□□□ -1.98
RTF1Q92541 CYCSP26-201ENST00000534107 320 ntBASIC2.66□□□□□ -1.98
RTF1Q92541 AC026271.5-201ENST00000577873 130 ntBASIC2.66□□□□□ -1.98
RTF1Q92541 MIR5688-201ENST00000580619 83 ntBASIC2.66□□□□□ -1.98
RTF1Q92541 MIR5002-201ENST00000584713 97 ntBASIC2.66□□□□□ -1.98
RTF1Q92541 AC004832.4-201ENST00000608952 331 ntBASIC2.66□□□□□ -1.98
RTF1Q92541 AL353149.1-201ENST00000610667 244 ntBASIC2.66□□□□□ -1.98
RTF1Q92541 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.98
RTF1Q92541 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
RTF1Q92541 AL356292.1-201ENST00000283110 373 ntBASIC2.65□□□□□ -1.99
RTF1Q92541 RNU1-22P-201ENST00000363334 158 ntBASIC2.65□□□□□ -1.99
RTF1Q92541 RNU6-923P-201ENST00000364753 107 ntBASIC2.65□□□□□ -1.99
RTF1Q92541 RNU6-144P-201ENST00000383951 107 ntBASIC2.65□□□□□ -1.99
RTF1Q92541 SNORD116-13-201ENST00000384408 92 ntBASIC2.65□□□□□ -1.99
RTF1Q92541 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.65□□□□□ -1.99
RTF1Q92541 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.65□□□□□ -1.99
RTF1Q92541 AC011406.1-201ENST00000512440 370 ntBASIC2.65□□□□□ -1.99
RTF1Q92541 AC097462.1-201ENST00000514125 324 ntBASIC2.65□□□□□ -1.99
RTF1Q92541 RNY3P16-201ENST00000516338 101 ntBASIC2.65□□□□□ -1.99
RTF1Q92541 RNU7-116P-201ENST00000516940 62 ntBASIC2.65□□□□□ -1.99
RTF1Q92541 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.65□□□□□ -1.99
RTF1Q92541 MIR4308-201ENST00000580634 81 ntBASIC2.65□□□□□ -1.99
RTF1Q92541 MIR4438-201ENST00000585271 93 ntBASIC2.65□□□□□ -1.99
RTF1Q92541 AC005972.2-201ENST00000604690 348 ntBASIC2.65□□□□□ -1.99
RTF1Q92541 MIR203B-201ENST00000636080 86 ntBASIC2.65□□□□□ -1.99
RTF1Q92541 AC134026.1-201ENST00000623249 2239 ntBASIC2.64□□□□□ -1.99
RTF1Q92541 snoU2-30.2-201ENST00000362805 70 ntBASIC2.64□□□□□ -1.99
RTF1Q92541 Y_RNA.233-201ENST00000364407 101 ntBASIC2.64□□□□□ -1.99
RTF1Q92541 RNU6-493P-201ENST00000391321 108 ntBASIC2.64□□□□□ -1.99
RTF1Q92541 COX6CP10-201ENST00000416832 224 ntBASIC2.64□□□□□ -1.99
RTF1Q92541 HSPE1P21-201ENST00000438283 308 ntBASIC2.64□□□□□ -1.99
RTF1Q92541 AC010409.1-201ENST00000487382 476 ntBASIC2.64□□□□□ -1.99
RTF1Q92541 RNU6-1278P-201ENST00000516130 107 ntBASIC2.64□□□□□ -1.99
RTF1Q92541 RNU7-115P-201ENST00000516433 55 ntBASIC2.64□□□□□ -1.99
RTF1Q92541 IGLV3-17-201ENST00000519099 244 ntBASIC2.64□□□□□ -1.99
RTF1Q92541 AP003357.1-201ENST00000604497 148 ntBASIC2.64□□□□□ -1.99
RTF1Q92541 MIR548AY-201ENST00000617669 107 ntBASIC2.64□□□□□ -1.99
RTF1Q92541 U6.73-201ENST00000619194 103 ntBASIC2.64□□□□□ -1.99
RTF1Q92541 AC068647.2-201ENST00000637380 353 ntBASIC2.64□□□□□ -1.99
RTF1Q92541 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RTF1Q92541 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RTF1Q92541 Y_RNA.150-201ENST00000363562 102 ntBASIC2.63□□□□□ -1.99
RTF1Q92541 RNU6-1205P-201ENST00000363625 106 ntBASIC2.63□□□□□ -1.99
RTF1Q92541 RNU6-682P-201ENST00000363843 106 ntBASIC2.63□□□□□ -1.99
RTF1Q92541 SNORA38-201ENST00000363946 132 ntBASIC2.63□□□□□ -1.99
RTF1Q92541 RNU4-17P-201ENST00000365598 141 ntBASIC2.63□□□□□ -1.99
RTF1Q92541 MIR526A2-201ENST00000390198 65 ntBASIC2.63□□□□□ -1.99
RTF1Q92541 AC019129.1-201ENST00000403786 261 ntBASIC2.63□□□□□ -1.99
RTF1Q92541 HMGN2P34-201ENST00000437647 269 ntBASIC2.63□□□□□ -1.99
RTF1Q92541 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.63□□□□□ -1.99
RTF1Q92541 ZNF355P-201ENST00000427301 3216 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms