Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RNA5SP511-201ENST00000410487 115 ntBASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 AC117454.1-201ENST00000491120 168 ntBASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 RNU7-116P-201ENST00000516940 62 ntBASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 AC127455.1-201ENST00000565496 145 ntBASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 MIR3169-201ENST00000578032 83 ntBASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 MIR4308-201ENST00000580634 81 ntBASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 MIR5694-201ENST00000581190 76 ntBASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 AC007229.1-201ENST00000590455 412 ntBASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 AL031274.2-201ENST00000599419 203 ntBASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 AC072026.1-201ENST00000605023 201 ntBASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ATG4AQ8WYN0 RNU6-23P-201ENST00000363283 107 ntBASIC2.24□□□□□ -2.05
ATG4AQ8WYN0 RNU4-13P-201ENST00000364019 141 ntBASIC2.24□□□□□ -2.05
ATG4AQ8WYN0 RNU6-144P-201ENST00000383951 107 ntBASIC2.24□□□□□ -2.05
ATG4AQ8WYN0 RNU6-301P-201ENST00000384277 107 ntBASIC2.24□□□□□ -2.05
ATG4AQ8WYN0 RNU6-376P-201ENST00000384731 106 ntBASIC2.24□□□□□ -2.05
ATG4AQ8WYN0 AL117342.1-201ENST00000404861 406 ntBASIC2.24□□□□□ -2.05
ATG4AQ8WYN0 EBAG9P1-201ENST00000418955 543 ntBASIC2.24□□□□□ -2.05
ATG4AQ8WYN0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.24□□□□□ -2.05
ATG4AQ8WYN0 YWHAEP4-201ENST00000505390 198 ntBASIC2.24□□□□□ -2.05
ATG4AQ8WYN0 AC107393.1-201ENST00000512403 346 ntBASIC2.24□□□□□ -2.05
ATG4AQ8WYN0 RNA5SP82-201ENST00000516707 92 ntBASIC2.24□□□□□ -2.05
ATG4AQ8WYN0 MIR6895-201ENST00000613497 78 ntBASIC2.24□□□□□ -2.05
ATG4AQ8WYN0 Y_RNA.802-201ENST00000614892 130 ntBASIC2.24□□□□□ -2.05
ATG4AQ8WYN0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
ATG4AQ8WYN0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.23□□□□□ -2.05
ATG4AQ8WYN0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
ATG4AQ8WYN0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
ATG4AQ8WYN0 Y_RNA.270-201ENST00000364693 104 ntBASIC2.23□□□□□ -2.05
ATG4AQ8WYN0 RNA5SP160-201ENST00000364866 120 ntBASIC2.23□□□□□ -2.05
ATG4AQ8WYN0 RNA5SP126-201ENST00000365092 109 ntBASIC2.23□□□□□ -2.05
ATG4AQ8WYN0 SNORA8.3-201ENST00000384679 139 ntBASIC2.23□□□□□ -2.05
ATG4AQ8WYN0 RNU6-1186P-201ENST00000410429 97 ntBASIC2.23□□□□□ -2.05
ATG4AQ8WYN0 RNA5SP338-201ENST00000410495 85 ntBASIC2.23□□□□□ -2.05
ATG4AQ8WYN0 COX6CP10-201ENST00000416832 224 ntBASIC2.23□□□□□ -2.05
ATG4AQ8WYN0 RPS29P21-201ENST00000496272 170 ntBASIC2.23□□□□□ -2.05
ATG4AQ8WYN0 RNU7-128P-201ENST00000517247 62 ntBASIC2.23□□□□□ -2.05
ATG4AQ8WYN0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.23□□□□□ -2.05
ATG4AQ8WYN0 POLR3GP1-201ENST00000594073 261 ntBASIC2.23□□□□□ -2.05
ATG4AQ8WYN0 AL359075.3-201ENST00000613288 217 ntBASIC2.23□□□□□ -2.05
ATG4AQ8WYN0 AP000553.5-201ENST00000641933 54 ntBASIC2.23□□□□□ -2.05
ATG4AQ8WYN0 RNU1-58P-201ENST00000362413 163 ntBASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 Y_RNA.150-201ENST00000363562 102 ntBASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 MIR515-2-201ENST00000384883 83 ntBASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 MIR515-1-201ENST00000384884 83 ntBASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 MIR526A2-201ENST00000390198 65 ntBASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 RNA5SP467-201ENST00000391274 118 ntBASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 SNORA36B-201ENST00000410438 131 ntBASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 CST2P1-201ENST00000425770 87 ntBASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 RNU6-717P-201ENST00000459076 104 ntBASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 RNU7-99P-201ENST00000516271 62 ntBASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 AC022559.1-201ENST00000520905 205 ntBASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 AC073413.2-201ENST00000604332 360 ntBASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ATG4AQ8WYN0 Y_RNA.7-201ENST00000362352 102 ntBASIC2.21□□□□□ -2.06
ATG4AQ8WYN0 RNU6-682P-201ENST00000363843 106 ntBASIC2.21□□□□□ -2.06
ATG4AQ8WYN0 RNU4-10P-201ENST00000364383 140 ntBASIC2.21□□□□□ -2.06
ATG4AQ8WYN0 Y_RNA.233-201ENST00000364407 101 ntBASIC2.21□□□□□ -2.06
ATG4AQ8WYN0 SNORA67.1-201ENST00000364749 141 ntBASIC2.21□□□□□ -2.06
ATG4AQ8WYN0 RNU6-886P-201ENST00000384319 105 ntBASIC2.21□□□□□ -2.06
ATG4AQ8WYN0 SNORA72-201ENST00000384339 132 ntBASIC2.21□□□□□ -2.06
ATG4AQ8WYN0 MIR626-201ENST00000385032 94 ntBASIC2.21□□□□□ -2.06
ATG4AQ8WYN0 RNU11-5P-201ENST00000391216 129 ntBASIC2.21□□□□□ -2.06
ATG4AQ8WYN0 RNU6-381P-201ENST00000391259 108 ntBASIC2.21□□□□□ -2.06
ATG4AQ8WYN0 AL021397.1-201ENST00000451806 248 ntBASIC2.21□□□□□ -2.06
ATG4AQ8WYN0 RPL23AP54-201ENST00000495129 419 ntBASIC2.21□□□□□ -2.06
ATG4AQ8WYN0 MIR5688-201ENST00000580619 83 ntBASIC2.21□□□□□ -2.06
ATG4AQ8WYN0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ATG4AQ8WYN0 ZNF658B-202ENST00000615961 3375 ntBASIC2.21□□□□□ -2.06
ATG4AQ8WYN0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
ATG4AQ8WYN0 MIR367-201ENST00000362299 68 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 RNU6-862P-201ENST00000362804 105 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 SNORA33-201ENST00000363664 130 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 Y_RNA.180-201ENST00000363867 113 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 RNU6-136P-201ENST00000384663 107 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 Y_RNA.571-201ENST00000384753 98 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 MIR520G-201ENST00000385064 90 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 PCNPP3-201ENST00000393579 471 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 RNA5SP508-201ENST00000411327 119 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 BX510359.4-201ENST00000423750 193 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 RPS4XP11-201ENST00000446897 772 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 RN7SL429P-201ENST00000479090 223 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 RN7SL489P-201ENST00000486185 223 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 RN7SL327P-201ENST00000488659 223 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 RN7SKP164-201ENST00000516138 266 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 RNA5SP200-201ENST00000516360 103 ntBASIC2.2□□□□□ -2.06
ATG4AQ8WYN0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms