Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCD2Q8WV60 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCD2Q8WV60 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCD2Q8WV60 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCD2Q8WV60 SNORA22.1-201ENST00000362701 134 ntBASIC4.08□□□□□ -1.76
PTCD2Q8WV60 SNORD35B-201ENST00000363660 87 ntBASIC4.08□□□□□ -1.76
PTCD2Q8WV60 RNU6-163P-201ENST00000384396 106 ntBASIC4.08□□□□□ -1.76
PTCD2Q8WV60 RNU1-89P-201ENST00000384592 164 ntBASIC4.08□□□□□ -1.76
PTCD2Q8WV60 MIR1267-201ENST00000408723 78 ntBASIC4.08□□□□□ -1.76
PTCD2Q8WV60 SNORA71B-202ENST00000439232 272 ntBASIC4.08□□□□□ -1.76
PTCD2Q8WV60 AL162151.2-201ENST00000448875 158 ntBASIC4.08□□□□□ -1.76
PTCD2Q8WV60 MIR2116-201ENST00000517221 80 ntBASIC4.08□□□□□ -1.76
PTCD2Q8WV60 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.08□□□□□ -1.76
PTCD2Q8WV60 AC025627.2-201ENST00000576220 160 ntBASIC4.08□□□□□ -1.76
PTCD2Q8WV60 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCD2Q8WV60 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCD2Q8WV60 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCD2Q8WV60 AC245060.5-201ENST00000610778 3293 ntBASIC4.08□□□□□ -1.76
PTCD2Q8WV60 AC005336.3-201ENST00000623833 2679 ntBASIC4.08□□□□□ -1.76
PTCD2Q8WV60 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PTCD2Q8WV60 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTCD2Q8WV60 MIR423-201ENST00000362201 94 ntBASIC4.07□□□□□ -1.76
PTCD2Q8WV60 SNORA48.7-201ENST00000391302 135 ntBASIC4.07□□□□□ -1.76
PTCD2Q8WV60 MICF-203ENST00000432679 129 ntBASIC4.07□□□□□ -1.76
PTCD2Q8WV60 CYCSP35-201ENST00000451978 304 ntBASIC4.07□□□□□ -1.76
PTCD2Q8WV60 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTCD2Q8WV60 ZNF962P-201ENST00000443465 3140 ntBASIC4.07□□□□□ -1.76
PTCD2Q8WV60 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PTCD2Q8WV60 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCD2Q8WV60 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTCD2Q8WV60 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.06□□□□□ -1.76
PTCD2Q8WV60 IPO8P1-201ENST00000455509 3109 ntBASIC4.06□□□□□ -1.76
PTCD2Q8WV60 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
PTCD2Q8WV60 RNA5SP387-201ENST00000364226 106 ntBASIC4.06□□□□□ -1.76
PTCD2Q8WV60 AP000567.1-201ENST00000406413 156 ntBASIC4.06□□□□□ -1.76
PTCD2Q8WV60 SRIP3-201ENST00000413200 219 ntBASIC4.06□□□□□ -1.76
PTCD2Q8WV60 AC245047.3-201ENST00000429428 127 ntBASIC4.06□□□□□ -1.76
PTCD2Q8WV60 RN7SL297P-201ENST00000483161 293 ntBASIC4.06□□□□□ -1.76
PTCD2Q8WV60 RN7SL636P-201ENST00000497504 294 ntBASIC4.06□□□□□ -1.76
PTCD2Q8WV60 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC4.06□□□□□ -1.76
PTCD2Q8WV60 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCD2Q8WV60 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.06□□□□□ -1.76
PTCD2Q8WV60 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PTCD2Q8WV60 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCD2Q8WV60 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.05□□□□□ -1.76
PTCD2Q8WV60 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.05□□□□□ -1.76
PTCD2Q8WV60 RNU6-1229P-201ENST00000364295 107 ntBASIC4.05□□□□□ -1.76
PTCD2Q8WV60 CST2P1-201ENST00000425770 87 ntBASIC4.05□□□□□ -1.76
PTCD2Q8WV60 MIR1270-201ENST00000459320 83 ntBASIC4.05□□□□□ -1.76
PTCD2Q8WV60 AC093729.1-201ENST00000513074 128 ntBASIC4.05□□□□□ -1.76
PTCD2Q8WV60 MIR6875-201ENST00000617506 72 ntBASIC4.05□□□□□ -1.76
PTCD2Q8WV60 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTCD2Q8WV60 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.05□□□□□ -1.76
PTCD2Q8WV60 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTCD2Q8WV60 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTCD2Q8WV60 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTCD2Q8WV60 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
PTCD2Q8WV60 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
PTCD2Q8WV60 SNORD38.1-201ENST00000363863 68 ntBASIC4.04□□□□□ -1.76
PTCD2Q8WV60 Y_RNA.247-201ENST00000364500 92 ntBASIC4.04□□□□□ -1.76
PTCD2Q8WV60 RNU6-1163P-201ENST00000364516 107 ntBASIC4.04□□□□□ -1.76
PTCD2Q8WV60 SNORA32-201ENST00000384072 121 ntBASIC4.04□□□□□ -1.76
PTCD2Q8WV60 RNU6-524P-201ENST00000384270 107 ntBASIC4.04□□□□□ -1.76
PTCD2Q8WV60 Y_RNA.545-201ENST00000384652 105 ntBASIC4.04□□□□□ -1.76
PTCD2Q8WV60 RNA5SP261-201ENST00000410536 106 ntBASIC4.04□□□□□ -1.76
PTCD2Q8WV60 RNU2-63P-201ENST00000410792 194 ntBASIC4.04□□□□□ -1.76
PTCD2Q8WV60 AC083863.1-201ENST00000438811 231 ntBASIC4.04□□□□□ -1.76
PTCD2Q8WV60 RNU7-34P-201ENST00000459394 64 ntBASIC4.04□□□□□ -1.76
PTCD2Q8WV60 SNORA48.11-201ENST00000517015 89 ntBASIC4.04□□□□□ -1.76
PTCD2Q8WV60 RNU7-181P-201ENST00000517234 74 ntBASIC4.04□□□□□ -1.76
PTCD2Q8WV60 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCD2Q8WV60 U7.4-201ENST00000614961 63 ntBASIC4.04□□□□□ -1.76
PTCD2Q8WV60 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTCD2Q8WV60 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTCD2Q8WV60 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTCD2Q8WV60 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTCD2Q8WV60 SNORD115-37-201ENST00000363768 82 ntBASIC4.03□□□□□ -1.76
PTCD2Q8WV60 MIR95-201ENST00000385072 81 ntBASIC4.03□□□□□ -1.76
PTCD2Q8WV60 NDUFB4P4-201ENST00000404822 243 ntBASIC4.03□□□□□ -1.76
PTCD2Q8WV60 RNU2-48P-201ENST00000410694 191 ntBASIC4.03□□□□□ -1.76
PTCD2Q8WV60 RHEBP3-201ENST00000411920 351 ntBASIC4.03□□□□□ -1.76
PTCD2Q8WV60 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC4.03□□□□□ -1.76
PTCD2Q8WV60 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.02□□□□□ -1.77
PTCD2Q8WV60 Y_RNA.140-201ENST00000363474 103 ntBASIC4.02□□□□□ -1.77
PTCD2Q8WV60 U8.11-201ENST00000384699 133 ntBASIC4.02□□□□□ -1.77
PTCD2Q8WV60 MIR23B-201ENST00000384832 97 ntBASIC4.02□□□□□ -1.77
PTCD2Q8WV60 MIR519C-201ENST00000385053 87 ntBASIC4.02□□□□□ -1.77
PTCD2Q8WV60 MIR134-201ENST00000385258 73 ntBASIC4.02□□□□□ -1.77
PTCD2Q8WV60 RNU6-628P-201ENST00000410675 107 ntBASIC4.02□□□□□ -1.77
PTCD2Q8WV60 RNU6-1328P-201ENST00000410938 106 ntBASIC4.02□□□□□ -1.77
PTCD2Q8WV60 RN7SKP192-201ENST00000411291 327 ntBASIC4.02□□□□□ -1.77
PTCD2Q8WV60 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC4.02□□□□□ -1.77
PTCD2Q8WV60 AL161932.1-201ENST00000437408 146 ntBASIC4.02□□□□□ -1.77
PTCD2Q8WV60 RPS29P7-201ENST00000439662 171 ntBASIC4.02□□□□□ -1.77
PTCD2Q8WV60 U8.18-201ENST00000459285 133 ntBASIC4.02□□□□□ -1.77
PTCD2Q8WV60 MIR6868-201ENST00000611215 58 ntBASIC4.02□□□□□ -1.77
PTCD2Q8WV60 MIR7515-201ENST00000637837 67 ntBASIC4.02□□□□□ -1.77
PTCD2Q8WV60 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.02□□□□□ -1.77
PTCD2Q8WV60 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCD2Q8WV60 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms