Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL157770.1-201ENST00000623049 439 ntBASIC-0.53□□□□□ -2.49
ALMS1Q8TCU4 RNU6-511P-201ENST00000363496 107 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 MTCO3P19-201ENST00000415864 321 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 AC018865.2-201ENST00000423631 129 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 AC138749.4-201ENST00000563970 127 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 AL355375.2-201ENST00000574825 175 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 AC087683.1-201ENST00000591187 441 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 AC091965.4-201ENST00000607691 587 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 AC124016.2-201ENST00000610058 665 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 MIR7844-201ENST00000616161 122 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 uc_338.4-201ENST00000616635 176 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 MIR320B2-201ENST00000408479 138 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 SSR1P2-201ENST00000415208 787 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 AC011352.1-201ENST00000512300 793 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 RNU6-504P-201ENST00000516568 104 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 AC005776.1-201ENST00000603164 290 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 RNU6-88P-201ENST00000606801 100 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 AL590491.3-201ENST00000610731 82 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 AL078596.1-201ENST00000624856 447 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 MIR578-201ENST00000384828 96 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 MIR586-201ENST00000385035 97 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 AC116353.2-201ENST00000505332 712 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 AC138207.3-201ENST00000585289 166 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 AC023158.2-201ENST00000614876 543 ntBASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.54□□□□□ -2.5
ALMS1Q8TCU4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 AC022306.3-201ENST00000619930 550 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 RNU6-371P-201ENST00000364283 108 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 RNU6-24P-201ENST00000384440 107 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 SNORA75.4-201ENST00000391278 119 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 RNU6-847P-201ENST00000411115 108 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 CALM2P2-201ENST00000428512 440 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 MTCO2P3-201ENST00000442543 421 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 MTATP6P14-201ENST00000455189 673 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 AC073539.2-201ENST00000597113 165 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 AC139792.3-201ENST00000623525 224 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 SNORD115-48-201ENST00000364764 76 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 MIR570-201ENST00000384917 97 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 SUMO1P2-201ENST00000452524 304 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 AC091133.4-201ENST00000511142 308 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 MTND4LP25-201ENST00000570218 163 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 MIR4499-201ENST00000584834 69 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 AC010608.3-201ENST00000625048 527 ntBASIC-0.55□□□□□ -2.5
ALMS1Q8TCU4 SNORD115-2-201ENST00000362842 82 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 SNORD68-201ENST00000363214 84 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 RNU6-883P-201ENST00000384597 107 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 MIR516B1-201ENST00000385211 90 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 AC079140.5-201ENST00000507882 310 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 SNORD45.4-201ENST00000516629 73 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 AC109479.2-201ENST00000517842 174 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 AC107934.1-201ENST00000522215 217 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 uc_338.19-201ENST00000616808 99 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 SNORD38C-201ENST00000384381 69 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 MTND2P20-201ENST00000440805 661 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 AC131281.1-201ENST00000522984 164 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 MIR4251-201ENST00000635819 61 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 RNU6-403P-201ENST00000363163 104 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 MTCO2P6-201ENST00000463134 685 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 AC010486.3-201ENST00000511602 785 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 AC140658.3-201ENST00000567603 271 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 AC103706.2-201ENST00000638080 240 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 MTND4P9-201ENST00000507819 1346 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 U8.17-201ENST00000391292 132 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 MTND1P11-201ENST00000456661 876 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 RNU7-138P-201ENST00000459479 64 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 SNORD18.2-201ENST00000459604 70 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 RNY4-201ENST00000516507 96 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 RNA5SP47-201ENST00000517230 109 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 MIR3146-201ENST00000580367 79 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 DEFB131E-202ENST00000602581 683 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 AP001836.1-201ENST00000604675 523 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 AC063944.3-201ENST00000609969 533 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-0.56□□□□□ -2.5
ALMS1Q8TCU4 Z97988.1-201ENST00000637697 135 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms