Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
CCDC148Q8NFR7 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
CCDC148Q8NFR7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.34□□□□□ -2.36
CCDC148Q8NFR7 AC125232.2-201ENST00000592457 143 ntBASIC0.34□□□□□ -2.36
CCDC148Q8NFR7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CCDC148Q8NFR7 RNU6-222P-201ENST00000362438 107 ntBASIC0.33□□□□□ -2.36
CCDC148Q8NFR7 Y_RNA.414-201ENST00000384011 101 ntBASIC0.33□□□□□ -2.36
CCDC148Q8NFR7 RNU6-1119P-201ENST00000384349 108 ntBASIC0.33□□□□□ -2.36
CCDC148Q8NFR7 RNA5SP222-201ENST00000411039 105 ntBASIC0.33□□□□□ -2.36
CCDC148Q8NFR7 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.33□□□□□ -2.36
CCDC148Q8NFR7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.33□□□□□ -2.36
CCDC148Q8NFR7 AC018448.1-201ENST00000552843 316 ntBASIC0.33□□□□□ -2.36
CCDC148Q8NFR7 Y_RNA.256-201ENST00000364594 104 ntBASIC0.32□□□□□ -2.36
CCDC148Q8NFR7 RNU6-259P-201ENST00000383999 107 ntBASIC0.32□□□□□ -2.36
CCDC148Q8NFR7 SNORA36.2-201ENST00000384004 127 ntBASIC0.32□□□□□ -2.36
CCDC148Q8NFR7 Y_RNA.498-201ENST00000384460 102 ntBASIC0.32□□□□□ -2.36
CCDC148Q8NFR7 RNU6-136P-201ENST00000384663 107 ntBASIC0.32□□□□□ -2.36
CCDC148Q8NFR7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
CCDC148Q8NFR7 RNU6-908P-201ENST00000410160 94 ntBASIC0.32□□□□□ -2.36
CCDC148Q8NFR7 RNU6-177P-201ENST00000411257 104 ntBASIC0.32□□□□□ -2.36
CCDC148Q8NFR7 MTND1P4-201ENST00000435196 415 ntBASIC0.32□□□□□ -2.36
CCDC148Q8NFR7 AL392103.1-201ENST00000447000 198 ntBASIC0.32□□□□□ -2.36
CCDC148Q8NFR7 ELOCP24-201ENST00000456370 334 ntBASIC0.32□□□□□ -2.36
CCDC148Q8NFR7 AC002350.1-201ENST00000490759 375 ntBASIC0.32□□□□□ -2.36
CCDC148Q8NFR7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.32□□□□□ -2.36
CCDC148Q8NFR7 AF250324.2-201ENST00000608299 610 ntBASIC0.32□□□□□ -2.36
CCDC148Q8NFR7 AL591926.4-201ENST00000616895 298 ntBASIC0.32□□□□□ -2.36
CCDC148Q8NFR7 AC078883.4-201ENST00000623218 367 ntBASIC0.32□□□□□ -2.36
CCDC148Q8NFR7 MIR3674-201ENST00000636576 68 ntBASIC0.32□□□□□ -2.36
CCDC148Q8NFR7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CCDC148Q8NFR7 Y_RNA.243-201ENST00000364481 109 ntBASIC0.31□□□□□ -2.36
CCDC148Q8NFR7 RNU6-342P-201ENST00000384521 104 ntBASIC0.31□□□□□ -2.36
CCDC148Q8NFR7 MIR516B2-201ENST00000385190 85 ntBASIC0.31□□□□□ -2.36
CCDC148Q8NFR7 RNA5SP475-201ENST00000410568 110 ntBASIC0.31□□□□□ -2.36
CCDC148Q8NFR7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.31□□□□□ -2.36
CCDC148Q8NFR7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.31□□□□□ -2.36
CCDC148Q8NFR7 MTCO2P12-201ENST00000427426 682 ntBASIC0.31□□□□□ -2.36
CCDC148Q8NFR7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.31□□□□□ -2.36
CCDC148Q8NFR7 UBE2V1P7-201ENST00000446395 340 ntBASIC0.31□□□□□ -2.36
CCDC148Q8NFR7 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.31□□□□□ -2.36
CCDC148Q8NFR7 AC104695.3-201ENST00000604052 296 ntBASIC0.31□□□□□ -2.36
CCDC148Q8NFR7 AL357075.2-201ENST00000614906 189 ntBASIC0.31□□□□□ -2.36
CCDC148Q8NFR7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.31□□□□□ -2.36
CCDC148Q8NFR7 MIR140-201ENST00000385282 100 ntBASIC0.3□□□□□ -2.36
CCDC148Q8NFR7 AL354751.2-201ENST00000415471 210 ntBASIC0.3□□□□□ -2.36
CCDC148Q8NFR7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
CCDC148Q8NFR7 AC019235.1-201ENST00000503847 207 ntBASIC0.3□□□□□ -2.36
CCDC148Q8NFR7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.3□□□□□ -2.36
CCDC148Q8NFR7 OSBPL9P5-201ENST00000542581 171 ntBASIC0.3□□□□□ -2.36
CCDC148Q8NFR7 MIR1-1-201ENST00000362147 71 ntBASIC0.29□□□□□ -2.36
CCDC148Q8NFR7 RNU6-454P-201ENST00000364292 107 ntBASIC0.29□□□□□ -2.36
CCDC148Q8NFR7 Y_RNA.361-201ENST00000365515 120 ntBASIC0.29□□□□□ -2.36
CCDC148Q8NFR7 RNU6-306P-201ENST00000384617 107 ntBASIC0.29□□□□□ -2.36
CCDC148Q8NFR7 MIR190B-201ENST00000401119 79 ntBASIC0.29□□□□□ -2.36
CCDC148Q8NFR7 RNU6-1304P-201ENST00000411374 106 ntBASIC0.29□□□□□ -2.36
CCDC148Q8NFR7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.29□□□□□ -2.36
CCDC148Q8NFR7 SNORA18.7-201ENST00000516910 131 ntBASIC0.29□□□□□ -2.36
CCDC148Q8NFR7 AC007742.2-201ENST00000618226 398 ntBASIC0.29□□□□□ -2.36
CCDC148Q8NFR7 PVT1_3.1-201ENST00000620853 95 ntBASIC0.29□□□□□ -2.36
CCDC148Q8NFR7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.29□□□□□ -2.36
CCDC148Q8NFR7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.29□□□□□ -2.36
CCDC148Q8NFR7 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 SNORD114-23-201ENST00000363536 72 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 RNY3P3-201ENST00000363816 102 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 Y_RNA.364-201ENST00000365532 101 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 RNU6-1310P-201ENST00000384153 107 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 MIR216A-201ENST00000385063 110 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 RNA5SP511-201ENST00000410487 115 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 Y_RNA.621-201ENST00000411065 96 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 HMGN2P32-201ENST00000444648 269 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 RNU6-625P-201ENST00000459412 107 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 SNORD123-201ENST00000459473 70 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 SNORA68.3-201ENST00000515906 83 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 RNU6-63P-201ENST00000516690 95 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 MTND2P38-201ENST00000522536 667 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 AC022616.4-201ENST00000522985 181 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 AC093027.1-201ENST00000546698 429 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 MIR5701-3-201ENST00000578890 82 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 MIR5701-1-201ENST00000585138 82 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 MIR5701-2-201ENST00000615634 82 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 MIR3974-201ENST00000637126 96 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 AC100810.6-201ENST00000638068 285 ntBASIC0.28□□□□□ -2.36
CCDC148Q8NFR7 Y_RNA.118-201ENST00000363300 101 ntBASIC0.27□□□□□ -2.37
CCDC148Q8NFR7 RNU4-45P-201ENST00000365469 141 ntBASIC0.27□□□□□ -2.37
CCDC148Q8NFR7 RNU6-483P-201ENST00000384088 108 ntBASIC0.27□□□□□ -2.37
CCDC148Q8NFR7 MIR1302-7-201ENST00000408841 72 ntBASIC0.27□□□□□ -2.37
CCDC148Q8NFR7 RNU6-613P-201ENST00000410412 108 ntBASIC0.27□□□□□ -2.37
CCDC148Q8NFR7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.27□□□□□ -2.37
CCDC148Q8NFR7 DLGAP5P1-201ENST00000430307 464 ntBASIC0.27□□□□□ -2.37
CCDC148Q8NFR7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.27□□□□□ -2.37
CCDC148Q8NFR7 U8.19-201ENST00000459095 133 ntBASIC0.27□□□□□ -2.37
CCDC148Q8NFR7 U8.22-201ENST00000459141 133 ntBASIC0.27□□□□□ -2.37
CCDC148Q8NFR7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.27□□□□□ -2.37
CCDC148Q8NFR7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.27□□□□□ -2.37
CCDC148Q8NFR7 MIR4300-201ENST00000581016 96 ntBASIC0.27□□□□□ -2.37
CCDC148Q8NFR7 RN7SKP299-201ENST00000606679 301 ntBASIC0.27□□□□□ -2.37
CCDC148Q8NFR7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms