Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 Y_RNA.224-201ENST00000364308 111 ntBASIC2.68□□□□□ -1.98
SMC1BQ8NDV3 Y_RNA.287-201ENST00000364853 94 ntBASIC2.68□□□□□ -1.98
SMC1BQ8NDV3 MIR221-201ENST00000385135 110 ntBASIC2.68□□□□□ -1.98
SMC1BQ8NDV3 SNORA40.19-201ENST00000390846 128 ntBASIC2.68□□□□□ -1.98
SMC1BQ8NDV3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.68□□□□□ -1.98
SMC1BQ8NDV3 BTF3P4-201ENST00000418852 495 ntBASIC2.68□□□□□ -1.98
SMC1BQ8NDV3 ATP5J2P3-201ENST00000451550 258 ntBASIC2.68□□□□□ -1.98
SMC1BQ8NDV3 SNORD2.1-201ENST00000458762 69 ntBASIC2.68□□□□□ -1.98
SMC1BQ8NDV3 RNU6-1278P-201ENST00000516130 107 ntBASIC2.68□□□□□ -1.98
SMC1BQ8NDV3 RNU6-1041P-201ENST00000516254 102 ntBASIC2.68□□□□□ -1.98
SMC1BQ8NDV3 RNU6-1337P-201ENST00000516525 95 ntBASIC2.68□□□□□ -1.98
SMC1BQ8NDV3 MIR4282-201ENST00000583613 67 ntBASIC2.68□□□□□ -1.98
SMC1BQ8NDV3 snoU18.1-201ENST00000629629 71 ntBASIC2.68□□□□□ -1.98
SMC1BQ8NDV3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SMC1BQ8NDV3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
SMC1BQ8NDV3 RNU6-200P-201ENST00000364743 107 ntBASIC2.67□□□□□ -1.98
SMC1BQ8NDV3 Y_RNA.292-201ENST00000364904 97 ntBASIC2.67□□□□□ -1.98
SMC1BQ8NDV3 MIR1298-201ENST00000408783 112 ntBASIC2.67□□□□□ -1.98
SMC1BQ8NDV3 RNU1-104P-201ENST00000517280 175 ntBASIC2.67□□□□□ -1.98
SMC1BQ8NDV3 AL353149.1-201ENST00000610667 244 ntBASIC2.67□□□□□ -1.98
SMC1BQ8NDV3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SMC1BQ8NDV3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SMC1BQ8NDV3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SMC1BQ8NDV3 Y_RNA.199-201ENST00000364014 102 ntBASIC2.66□□□□□ -1.98
SMC1BQ8NDV3 RNA5SP493-201ENST00000364115 91 ntBASIC2.66□□□□□ -1.98
SMC1BQ8NDV3 Y_RNA.310-201ENST00000365063 113 ntBASIC2.66□□□□□ -1.98
SMC1BQ8NDV3 RNU11-5P-201ENST00000391216 129 ntBASIC2.66□□□□□ -1.98
SMC1BQ8NDV3 HSPE1P21-201ENST00000438283 308 ntBASIC2.66□□□□□ -1.98
SMC1BQ8NDV3 COX6CP14-201ENST00000469580 174 ntBASIC2.66□□□□□ -1.98
SMC1BQ8NDV3 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.66□□□□□ -1.98
SMC1BQ8NDV3 AP005660.1-201ENST00000522972 293 ntBASIC2.66□□□□□ -1.98
SMC1BQ8NDV3 AC022202.1-201ENST00000613515 211 ntBASIC2.66□□□□□ -1.98
SMC1BQ8NDV3 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.66□□□□□ -1.98
SMC1BQ8NDV3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
SMC1BQ8NDV3 AC245060.5-201ENST00000610778 3293 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 RNU1-58P-201ENST00000362413 163 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 Y_RNA.83-201ENST00000363005 113 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 RNU6-801P-201ENST00000364087 105 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 RNU6-211P-201ENST00000384047 107 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 SNORA72.4-201ENST00000384174 132 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 Y_RNA.540-201ENST00000384638 111 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 RNU6-417P-201ENST00000384712 107 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 RNU6-763P-201ENST00000390865 106 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 AC019129.1-201ENST00000403786 261 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 RNU6-651P-201ENST00000411040 105 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 RNU2-14P-201ENST00000411053 191 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 AL139156.1-201ENST00000412785 841 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 AL445646.1-201ENST00000431784 216 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 RPS20P10-201ENST00000451209 253 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 AC097462.1-201ENST00000514125 324 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 RNU7-172P-201ENST00000517125 64 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 U6.73-201ENST00000619194 103 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 ZNF355P-201ENST00000427301 3216 ntBASIC2.65□□□□□ -1.99
SMC1BQ8NDV3 RNU1-22P-201ENST00000363334 158 ntBASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 RNU6-899P-201ENST00000363947 107 ntBASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 RNU4-13P-201ENST00000364019 141 ntBASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 SNORA67.1-201ENST00000364749 141 ntBASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 MIR515-2-201ENST00000384883 83 ntBASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 MIR515-1-201ENST00000384884 83 ntBASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 AL135790.2-201ENST00000437701 267 ntBASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 RNU6-138P-201ENST00000515952 107 ntBASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 SNORD116-28-201ENST00000516123 91 ntBASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 RNA5SP82-201ENST00000516707 92 ntBASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 Y_RNA.700-201ENST00000516806 100 ntBASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 AC130289.1-201ENST00000577321 73 ntBASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 AC007229.1-201ENST00000590455 412 ntBASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 AC067747.1-201ENST00000608026 250 ntBASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 AL008718.3-201ENST00000610217 321 ntBASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 AL359075.3-201ENST00000613288 217 ntBASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 MIR6132-201ENST00000622083 109 ntBASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 MIR338-201ENST00000636369 67 ntBASIC2.64□□□□□ -1.99
SMC1BQ8NDV3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SMC1BQ8NDV3 RNY4P28-201ENST00000365281 93 ntBASIC2.63□□□□□ -1.99
SMC1BQ8NDV3 RNU6-376P-201ENST00000384731 106 ntBASIC2.63□□□□□ -1.99
SMC1BQ8NDV3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SMC1BQ8NDV3 RNU6-907P-201ENST00000390924 102 ntBASIC2.63□□□□□ -1.99
SMC1BQ8NDV3 RNU6-1186P-201ENST00000410429 97 ntBASIC2.63□□□□□ -1.99
SMC1BQ8NDV3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.63□□□□□ -1.99
SMC1BQ8NDV3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.63□□□□□ -1.99
SMC1BQ8NDV3 RPS15AP28-201ENST00000435088 386 ntBASIC2.63□□□□□ -1.99
SMC1BQ8NDV3 AC018634.1-201ENST00000437554 401 ntBASIC2.63□□□□□ -1.99
SMC1BQ8NDV3 Y_RNA.637-201ENST00000459424 114 ntBASIC2.63□□□□□ -1.99
SMC1BQ8NDV3 SNORA4-201ENST00000584302 138 ntBASIC2.63□□□□□ -1.99
SMC1BQ8NDV3 AC068647.2-201ENST00000637380 353 ntBASIC2.63□□□□□ -1.99
SMC1BQ8NDV3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
SMC1BQ8NDV3 Y_RNA.262-201ENST00000364641 102 ntBASIC2.62□□□□□ -1.99
SMC1BQ8NDV3 Y_RNA.297-201ENST00000364950 91 ntBASIC2.62□□□□□ -1.99
SMC1BQ8NDV3 MIR144-201ENST00000384886 86 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms