Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC134026.1-201ENST00000623249 2239 ntBASIC0.28□□□□□ -2.36
ZIC4Q8N9L1 MIR410-201ENST00000362222 80 ntBASIC0.28□□□□□ -2.36
ZIC4Q8N9L1 RNU6-595P-201ENST00000363944 107 ntBASIC0.28□□□□□ -2.36
ZIC4Q8N9L1 RNU6-454P-201ENST00000364292 107 ntBASIC0.28□□□□□ -2.36
ZIC4Q8N9L1 RNU6-596P-201ENST00000365395 98 ntBASIC0.28□□□□□ -2.36
ZIC4Q8N9L1 RNY1P4-201ENST00000384595 115 ntBASIC0.28□□□□□ -2.36
ZIC4Q8N9L1 MIR329-1-201ENST00000385028 80 ntBASIC0.28□□□□□ -2.36
ZIC4Q8N9L1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.28□□□□□ -2.36
ZIC4Q8N9L1 AC074133.1-201ENST00000515696 183 ntBASIC0.28□□□□□ -2.36
ZIC4Q8N9L1 RNU7-43P-201ENST00000516554 64 ntBASIC0.28□□□□□ -2.36
ZIC4Q8N9L1 AC036111.3-201ENST00000526389 112 ntBASIC0.28□□□□□ -2.36
ZIC4Q8N9L1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.28□□□□□ -2.36
ZIC4Q8N9L1 AC124864.2-201ENST00000624736 186 ntBASIC0.28□□□□□ -2.36
ZIC4Q8N9L1 MIR6516-201ENST00000630554 81 ntBASIC0.28□□□□□ -2.36
ZIC4Q8N9L1 U6.115-201ENST00000636045 103 ntBASIC0.28□□□□□ -2.36
ZIC4Q8N9L1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
ZIC4Q8N9L1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.28□□□□□ -2.37
ZIC4Q8N9L1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.28□□□□□ -2.37
ZIC4Q8N9L1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 RNU6-451P-201ENST00000362921 107 ntBASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 SNORD114-26-201ENST00000363543 72 ntBASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 Y_RNA.361-201ENST00000365515 120 ntBASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 RNU6-136P-201ENST00000384663 107 ntBASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 MIR193B-201ENST00000384907 83 ntBASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 SNORD105-201ENST00000386910 85 ntBASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 MIR1302-7-201ENST00000408841 72 ntBASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 RNU2-66P-201ENST00000410650 161 ntBASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 Y_RNA.621-201ENST00000411065 96 ntBASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 EIF1P2-201ENST00000428233 350 ntBASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 AC092989.1-201ENST00000481235 277 ntBASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 RNA5SP480-201ENST00000516840 109 ntBASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 AF235103.2-201ENST00000525753 346 ntBASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 MIR4764-201ENST00000580680 88 ntBASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 AL162413.1-201ENST00000603198 110 ntBASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 AC104260.1-201ENST00000616660 539 ntBASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.27□□□□□ -2.37
ZIC4Q8N9L1 SNORD114-7-201ENST00000362520 77 ntBASIC0.26□□□□□ -2.37
ZIC4Q8N9L1 U8.5-201ENST00000364528 136 ntBASIC0.26□□□□□ -2.37
ZIC4Q8N9L1 SNORD113.3-201ENST00000364630 78 ntBASIC0.26□□□□□ -2.37
ZIC4Q8N9L1 RNY1P8-201ENST00000383970 114 ntBASIC0.26□□□□□ -2.37
ZIC4Q8N9L1 RNU6-1145P-201ENST00000384246 107 ntBASIC0.26□□□□□ -2.37
ZIC4Q8N9L1 Y_RNA.498-201ENST00000384460 102 ntBASIC0.26□□□□□ -2.37
ZIC4Q8N9L1 RNU6-306P-201ENST00000384617 107 ntBASIC0.26□□□□□ -2.37
ZIC4Q8N9L1 MIR516B2-201ENST00000385190 85 ntBASIC0.26□□□□□ -2.37
ZIC4Q8N9L1 MRPS18CP6-201ENST00000423587 223 ntBASIC0.26□□□□□ -2.37
ZIC4Q8N9L1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.26□□□□□ -2.37
ZIC4Q8N9L1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.26□□□□□ -2.37
ZIC4Q8N9L1 AC093027.1-201ENST00000546698 429 ntBASIC0.26□□□□□ -2.37
ZIC4Q8N9L1 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.26□□□□□ -2.37
ZIC4Q8N9L1 MIR4300-201ENST00000581016 96 ntBASIC0.26□□□□□ -2.37
ZIC4Q8N9L1 MIR4762-201ENST00000585261 75 ntBASIC0.26□□□□□ -2.37
ZIC4Q8N9L1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
ZIC4Q8N9L1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
ZIC4Q8N9L1 Y_RNA.106-201ENST00000363189 100 ntBASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 RNU6-1059P-201ENST00000363752 98 ntBASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 SNORD116-11-201ENST00000383882 92 ntBASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 RNU6-259P-201ENST00000383999 107 ntBASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 RNU6-483P-201ENST00000384088 108 ntBASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 RNU6-842P-201ENST00000384269 107 ntBASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 MIR1827-201ENST00000408549 66 ntBASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 RNA5SP475-201ENST00000410568 110 ntBASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 AL392103.1-201ENST00000447000 198 ntBASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 RNU6-1281P-201ENST00000516223 105 ntBASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 RNU6-63P-201ENST00000516690 95 ntBASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 OSBPL9P5-201ENST00000542581 171 ntBASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 MIR5701-3-201ENST00000578890 82 ntBASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 MIR5701-1-201ENST00000585138 82 ntBASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 MIR3942-201ENST00000585264 109 ntBASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 MIR5701-2-201ENST00000615634 82 ntBASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 AC078883.4-201ENST00000623218 367 ntBASIC0.25□□□□□ -2.37
ZIC4Q8N9L1 MIR1-1-201ENST00000362147 71 ntBASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 RNU6-874P-201ENST00000362390 105 ntBASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 RNY3P3-201ENST00000363816 102 ntBASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 AC117470.1-201ENST00000381974 330 ntBASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 Y_RNA.414-201ENST00000384011 101 ntBASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 MIR140-201ENST00000385282 100 ntBASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 MTCO2P12-201ENST00000427426 682 ntBASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 ELOCP24-201ENST00000456370 334 ntBASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 SNORA62.5-201ENST00000516634 120 ntBASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 Y_RNA.704-201ENST00000516851 102 ntBASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 SNORA18.7-201ENST00000516910 131 ntBASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 AC018448.1-201ENST00000552843 316 ntBASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 NBR2-204ENST00000587322 63 ntBASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 Z99129.1-201ENST00000612510 255 ntBASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 AL591926.4-201ENST00000616895 298 ntBASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 MIR3974-201ENST00000637126 96 ntBASIC0.24□□□□□ -2.37
ZIC4Q8N9L1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
ZIC4Q8N9L1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.23□□□□□ -2.37
ZIC4Q8N9L1 AC090625.1-201ENST00000357130 210 ntBASIC0.23□□□□□ -2.37
ZIC4Q8N9L1 RNU6-369P-201ENST00000362515 102 ntBASIC0.23□□□□□ -2.37
ZIC4Q8N9L1 Y_RNA.38-201ENST00000362617 102 ntBASIC0.23□□□□□ -2.37
ZIC4Q8N9L1 RNU6-654P-201ENST00000364373 107 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms