Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 RNU6-899P-201ENST00000363947 107 ntBASIC1.95□□□□□ -2.1
CLIP4Q8N3C7 RNU6-209P-201ENST00000384118 107 ntBASIC1.95□□□□□ -2.1
CLIP4Q8N3C7 RNU6-136P-201ENST00000384663 107 ntBASIC1.95□□□□□ -2.1
CLIP4Q8N3C7 SNORA40.19-201ENST00000390846 128 ntBASIC1.95□□□□□ -2.1
CLIP4Q8N3C7 RNU6-493P-201ENST00000391321 108 ntBASIC1.95□□□□□ -2.1
CLIP4Q8N3C7 MIR548I3-201ENST00000408378 149 ntBASIC1.95□□□□□ -2.1
CLIP4Q8N3C7 MIR548I1-201ENST00000408810 149 ntBASIC1.95□□□□□ -2.1
CLIP4Q8N3C7 HMGN2P34-201ENST00000437647 269 ntBASIC1.95□□□□□ -2.1
CLIP4Q8N3C7 RNU7-141P-201ENST00000459304 62 ntBASIC1.95□□□□□ -2.1
CLIP4Q8N3C7 AC011406.1-201ENST00000512440 370 ntBASIC1.95□□□□□ -2.1
CLIP4Q8N3C7 AL137100.2-201ENST00000555786 315 ntBASIC1.95□□□□□ -2.1
CLIP4Q8N3C7 AC026271.5-201ENST00000577873 130 ntBASIC1.95□□□□□ -2.1
CLIP4Q8N3C7 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
CLIP4Q8N3C7 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.95□□□□□ -2.1
CLIP4Q8N3C7 AC068647.2-201ENST00000637380 353 ntBASIC1.95□□□□□ -2.1
CLIP4Q8N3C7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CLIP4Q8N3C7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 RNU6-653P-201ENST00000363074 106 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 Y_RNA.150-201ENST00000363562 102 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 Y_RNA.270-201ENST00000364693 104 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 Y_RNA.293-201ENST00000364908 93 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 U8.7-201ENST00000364940 136 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 RNU6-160P-201ENST00000384591 107 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 RNU6-417P-201ENST00000384712 107 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 RNA5SP511-201ENST00000410487 115 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 COX6CP10-201ENST00000416832 224 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 AC104332.1-201ENST00000440471 797 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 AC117454.1-201ENST00000491120 168 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 RNU6-1041P-201ENST00000516254 102 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 RNU6-1146P-201ENST00000516282 102 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 RNU7-193P-201ENST00000516723 65 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 AC022559.1-201ENST00000520905 205 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 MIR4435-1-201ENST00000582552 80 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 MIR4438-201ENST00000585271 93 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 FTX_2.1-201ENST00000618816 94 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 AC068700.1-201ENST00000565862 3754 ntBASIC1.94□□□□□ -2.1
CLIP4Q8N3C7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 SNORD115-3-201ENST00000363100 82 ntBASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 RNU4-10P-201ENST00000364383 140 ntBASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 RNU6-918P-201ENST00000391219 106 ntBASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 RNU2-40P-201ENST00000410833 196 ntBASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 RNA5SP270-201ENST00000411361 118 ntBASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 AC010154.1-201ENST00000425857 269 ntBASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 RNU7-120P-201ENST00000459334 63 ntBASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 AC025033.1-201ENST00000463883 194 ntBASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 RNU7-172P-201ENST00000517125 64 ntBASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 SUMO2P18-201ENST00000518873 252 ntBASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 MIR4308-201ENST00000580634 81 ntBASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 MIR4298-201ENST00000584380 73 ntBASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 AC005972.2-201ENST00000604690 348 ntBASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 AC004832.4-201ENST00000608952 331 ntBASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 U6.73-201ENST00000619194 103 ntBASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 AL359851.1-201ENST00000569460 4997 ntBASIC1.93□□□□□ -2.1
CLIP4Q8N3C7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 snoU2-30.2-201ENST00000362805 70 ntBASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 RNU1-22P-201ENST00000363334 158 ntBASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 RNU6-1205P-201ENST00000363625 106 ntBASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 RNU6-1164P-201ENST00000364428 107 ntBASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 RNA5SP126-201ENST00000365092 109 ntBASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 RNU6-117P-201ENST00000365415 107 ntBASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 HMGN2P39-201ENST00000398005 273 ntBASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 SNORA11.4-201ENST00000408823 129 ntBASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 RN7SKP284-201ENST00000411002 343 ntBASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 AC245102.2-201ENST00000448956 180 ntBASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 RNU1-131P-201ENST00000458943 161 ntBASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 RPL36AP21-201ENST00000490372 323 ntBASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 RN7SL274P-201ENST00000492268 272 ntBASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 RNU7-115P-201ENST00000516433 55 ntBASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 SNORA31.25-201ENST00000517242 134 ntBASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 POLR3GP1-201ENST00000594073 261 ntBASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 AC072026.1-201ENST00000605023 201 ntBASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CLIP4Q8N3C7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 RNU4-13P-201ENST00000364019 141 ntBASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 RNA5SP493-201ENST00000364115 91 ntBASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 RNU6-1323P-201ENST00000384025 107 ntBASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 Y_RNA.555-201ENST00000384673 110 ntBASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 AL023284.1-201ENST00000403956 276 ntBASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 RNU6-1186P-201ENST00000410429 97 ntBASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 SNORA36B-201ENST00000410438 131 ntBASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 RNA5SP508-201ENST00000411327 119 ntBASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 AL135786.1-201ENST00000415892 214 ntBASIC1.91□□□□□ -2.1
CLIP4Q8N3C7 AL353689.1-201ENST00000438895 199 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms