Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.04□□□□□ -2.08
VPS52Q8N1B4 MIR4503-201ENST00000582187 83 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS52Q8N1B4 AC010615.1-201ENST00000594254 1764 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 DEFB117-201ENST00000602356 141 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 7SK.10-201ENST00000621414 298 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS52Q8N1B4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 U6.104-201ENST00000637979 90 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 MIR335-201ENST00000362173 94 ntBASIC2.03□□□□□ -2.08
VPS52Q8N1B4 Y_RNA.16-201ENST00000362421 102 ntBASIC2.03□□□□□ -2.08
VPS52Q8N1B4 RNU6-710P-201ENST00000410424 105 ntBASIC2.03□□□□□ -2.08
VPS52Q8N1B4 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
VPS52Q8N1B4 AC010154.1-201ENST00000425857 269 ntBASIC2.03□□□□□ -2.08
VPS52Q8N1B4 AC108667.1-201ENST00000428618 249 ntBASIC2.03□□□□□ -2.08
VPS52Q8N1B4 MTND4LP30-201ENST00000454092 297 ntBASIC2.03□□□□□ -2.08
VPS52Q8N1B4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.03□□□□□ -2.08
VPS52Q8N1B4 RPS27P22-201ENST00000478056 241 ntBASIC2.03□□□□□ -2.08
VPS52Q8N1B4 RNVU1-2-201ENST00000516326 135 ntBASIC2.03□□□□□ -2.08
VPS52Q8N1B4 RNU2-31P-201ENST00000516954 155 ntBASIC2.03□□□□□ -2.08
VPS52Q8N1B4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.03□□□□□ -2.08
VPS52Q8N1B4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.03□□□□□ -2.08
VPS52Q8N1B4 AC023157.2-201ENST00000540596 141 ntBASIC2.03□□□□□ -2.08
VPS52Q8N1B4 SUB1P4-201ENST00000566062 339 ntBASIC2.03□□□□□ -2.08
VPS52Q8N1B4 AL359075.3-201ENST00000613288 217 ntBASIC2.03□□□□□ -2.08
VPS52Q8N1B4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS52Q8N1B4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
VPS52Q8N1B4 SNORA33-201ENST00000363664 130 ntBASIC2.02□□□□□ -2.09
VPS52Q8N1B4 RNU6-407P-201ENST00000365280 104 ntBASIC2.02□□□□□ -2.09
VPS52Q8N1B4 Y_RNA.452-201ENST00000384202 108 ntBASIC2.02□□□□□ -2.09
VPS52Q8N1B4 SNORA17.3-201ENST00000391159 129 ntBASIC2.02□□□□□ -2.09
VPS52Q8N1B4 RNA5SP467-201ENST00000391274 118 ntBASIC2.02□□□□□ -2.09
VPS52Q8N1B4 EBAG9P1-201ENST00000418955 543 ntBASIC2.02□□□□□ -2.09
VPS52Q8N1B4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS52Q8N1B4 RPS26P45-201ENST00000471748 340 ntBASIC2.02□□□□□ -2.09
VPS52Q8N1B4 RNU7-99P-201ENST00000516271 62 ntBASIC2.02□□□□□ -2.09
VPS52Q8N1B4 AC027419.1-201ENST00000522976 328 ntBASIC2.02□□□□□ -2.09
VPS52Q8N1B4 MIR4299-201ENST00000577899 72 ntBASIC2.02□□□□□ -2.09
VPS52Q8N1B4 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.02□□□□□ -2.09
VPS52Q8N1B4 U4.1-201ENST00000620349 87 ntBASIC2.02□□□□□ -2.09
VPS52Q8N1B4 U1.36-201ENST00000620684 176 ntBASIC2.02□□□□□ -2.09
VPS52Q8N1B4 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.02□□□□□ -2.09
VPS52Q8N1B4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.02□□□□□ -2.09
VPS52Q8N1B4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
VPS52Q8N1B4 ZNF702P-202ENST00000434269 1966 ntBASIC2.01□□□□□ -2.09
VPS52Q8N1B4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
VPS52Q8N1B4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
VPS52Q8N1B4 Y_RNA.164-201ENST00000363709 102 ntBASIC2.01□□□□□ -2.09
VPS52Q8N1B4 Y_RNA.238-201ENST00000364441 102 ntBASIC2.01□□□□□ -2.09
VPS52Q8N1B4 Y_RNA.368-201ENST00000365547 113 ntBASIC2.01□□□□□ -2.09
VPS52Q8N1B4 SNORA53-201ENST00000391141 249 ntBASIC2.01□□□□□ -2.09
VPS52Q8N1B4 RNA5SP489-201ENST00000410986 109 ntBASIC2.01□□□□□ -2.09
VPS52Q8N1B4 AC245047.4-201ENST00000433189 144 ntBASIC2.01□□□□□ -2.09
VPS52Q8N1B4 MTCO1P5-201ENST00000433573 344 ntBASIC2.01□□□□□ -2.09
VPS52Q8N1B4 SERF1AP1-201ENST00000514575 187 ntBASIC2.01□□□□□ -2.09
VPS52Q8N1B4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.01□□□□□ -2.09
VPS52Q8N1B4 MIR3145-201ENST00000580727 82 ntBASIC2.01□□□□□ -2.09
VPS52Q8N1B4 AC069114.2-201ENST00000604699 304 ntBASIC2.01□□□□□ -2.09
VPS52Q8N1B4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.01□□□□□ -2.09
VPS52Q8N1B4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
VPS52Q8N1B4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2□□□□□ -2.09
VPS52Q8N1B4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VPS52Q8N1B4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2□□□□□ -2.09
VPS52Q8N1B4 RNA5SP276-201ENST00000362580 94 ntBASIC2□□□□□ -2.09
VPS52Q8N1B4 RNU4-80P-201ENST00000363200 141 ntBASIC2□□□□□ -2.09
VPS52Q8N1B4 RNU6-1019P-201ENST00000364424 107 ntBASIC2□□□□□ -2.09
VPS52Q8N1B4 RNA5SP190-201ENST00000365222 118 ntBASIC2□□□□□ -2.09
VPS52Q8N1B4 RNU6-1248P-201ENST00000391096 64 ntBASIC2□□□□□ -2.09
VPS52Q8N1B4 AC024067.1-201ENST00000426199 223 ntBASIC2□□□□□ -2.09
VPS52Q8N1B4 RPL36AP21-201ENST00000490372 323 ntBASIC2□□□□□ -2.09
VPS52Q8N1B4 AC108729.3-201ENST00000513484 108 ntBASIC2□□□□□ -2.09
VPS52Q8N1B4 RNU6-191P-201ENST00000516295 94 ntBASIC2□□□□□ -2.09
VPS52Q8N1B4 SNORA25.15-201ENST00000516487 89 ntBASIC2□□□□□ -2.09
VPS52Q8N1B4 RNU6-1337P-201ENST00000516525 95 ntBASIC2□□□□□ -2.09
VPS52Q8N1B4 RNU7-172P-201ENST00000517125 64 ntBASIC2□□□□□ -2.09
VPS52Q8N1B4 DEFB108E-201ENST00000524692 240 ntBASIC2□□□□□ -2.09
VPS52Q8N1B4 MIR5094-201ENST00000578766 85 ntBASIC2□□□□□ -2.09
VPS52Q8N1B4 AC012493.3-201ENST00000604494 112 ntBASIC2□□□□□ -2.09
VPS52Q8N1B4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
VPS52Q8N1B4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.99□□□□□ -2.09
VPS52Q8N1B4 Y_RNA.193-201ENST00000363979 102 ntBASIC1.99□□□□□ -2.09
VPS52Q8N1B4 Y_RNA.237-201ENST00000364439 102 ntBASIC1.99□□□□□ -2.09
VPS52Q8N1B4 Y_RNA.310-201ENST00000365063 113 ntBASIC1.99□□□□□ -2.09
VPS52Q8N1B4 MIR9-3-201ENST00000385084 90 ntBASIC1.99□□□□□ -2.09
VPS52Q8N1B4 AL135790.2-201ENST00000437701 267 ntBASIC1.99□□□□□ -2.09
VPS52Q8N1B4 SNORD127-201ENST00000458892 86 ntBASIC1.99□□□□□ -2.09
VPS52Q8N1B4 RNU1-142P-201ENST00000516682 145 ntBASIC1.99□□□□□ -2.09
VPS52Q8N1B4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.99□□□□□ -2.09
VPS52Q8N1B4 MIR4498-201ENST00000577599 66 ntBASIC1.99□□□□□ -2.09
VPS52Q8N1B4 MIR3149-201ENST00000584629 83 ntBASIC1.99□□□□□ -2.09
VPS52Q8N1B4 AC084768.2-201ENST00000622736 221 ntBASIC1.99□□□□□ -2.09
VPS52Q8N1B4 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.99□□□□□ -2.09
VPS52Q8N1B4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
VPS52Q8N1B4 AL391987.6-201ENST00000305671 199 ntBASIC1.98□□□□□ -2.09
VPS52Q8N1B4 UBE2WP1-201ENST00000362030 340 ntBASIC1.98□□□□□ -2.09
VPS52Q8N1B4 Y_RNA.172-201ENST00000363765 102 ntBASIC1.98□□□□□ -2.09
VPS52Q8N1B4 SNORA63D-201ENST00000364359 132 ntBASIC1.98□□□□□ -2.09
VPS52Q8N1B4 Y_RNA.288-201ENST00000364854 92 ntBASIC1.98□□□□□ -2.09
VPS52Q8N1B4 Y_RNA.456-201ENST00000384232 111 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms