Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 RNA5SP511-201ENST00000410487 115 ntBASIC1.85□□□□□ -2.11
ZC3HC1Q86WB0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.85□□□□□ -2.11
ZC3HC1Q86WB0 RPS20P10-201ENST00000451209 253 ntBASIC1.85□□□□□ -2.11
ZC3HC1Q86WB0 AC136628.3-201ENST00000521868 290 ntBASIC1.85□□□□□ -2.11
ZC3HC1Q86WB0 MIR5094-201ENST00000578766 85 ntBASIC1.85□□□□□ -2.11
ZC3HC1Q86WB0 MIR3128-201ENST00000581957 66 ntBASIC1.85□□□□□ -2.11
ZC3HC1Q86WB0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.85□□□□□ -2.11
ZC3HC1Q86WB0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.85□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.217-201ENST00000364214 105 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 SNORA16.1-201ENST00000364597 132 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.275-201ENST00000364726 110 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 RNU6-740P-201ENST00000364734 105 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.416-201ENST00000384014 113 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.456-201ENST00000384232 111 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.477-201ENST00000384352 108 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 MIR515-2-201ENST00000384883 83 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 MIR515-1-201ENST00000384884 83 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 RNU2-14P-201ENST00000411053 191 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 RNA5SP508-201ENST00000411327 119 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 OOSP1P1-201ENST00000423265 274 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 AC245047.4-201ENST00000433189 144 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.641-201ENST00000459414 105 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 RPS26P45-201ENST00000471748 340 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 UBE2DNL-203ENST00000474922 222 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 AL163195.1-201ENST00000496941 348 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 RNU1-142P-201ENST00000516682 145 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 AC024995.1-201ENST00000523014 93 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 AC015720.1-201ENST00000565251 277 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 MIR4643-201ENST00000577473 78 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 AC004832.4-201ENST00000608952 331 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.84□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.277-201ENST00000364754 102 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 SNORA8-201ENST00000384574 139 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 RNU6-136P-201ENST00000384663 107 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 MT-TG-201ENST00000387429 68 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 RNU6-763P-201ENST00000390865 106 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 SNORA26.5-201ENST00000391215 123 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 MIR548H3-201ENST00000408771 118 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.618-201ENST00000410949 107 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 RNU6-651P-201ENST00000411040 105 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 AC010154.1-201ENST00000425857 269 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.637-201ENST00000459424 114 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 RNU6-1278P-201ENST00000516130 107 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.673-201ENST00000516306 88 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 AC084364.2-201ENST00000546924 395 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 SUB1P4-201ENST00000566062 339 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 MIR4299-201ENST00000577899 72 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 MIR4435-1-201ENST00000582552 80 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 AC006006.1-201ENST00000603082 144 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 AC073413.2-201ENST00000604332 360 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 AL627230.6-201ENST00000611129 280 ntBASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
ZC3HC1Q86WB0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.60-201ENST00000362831 98 ntBASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.117-201ENST00000363294 101 ntBASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.188-201ENST00000363952 111 ntBASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 RNU6-1048P-201ENST00000364054 107 ntBASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 RNU6-1019P-201ENST00000364424 107 ntBASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.539-201ENST00000384635 107 ntBASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 RNA5SP323-201ENST00000391094 133 ntBASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 RN7SKP192-201ENST00000411291 327 ntBASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 AC244636.1-201ENST00000421152 228 ntBASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 AL162725.1-201ENST00000435405 301 ntBASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 RPL23AP6-201ENST00000446637 472 ntBASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 TRBV12-1-201ENST00000479785 344 ntBASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 RPL36AP21-201ENST00000490372 323 ntBASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 RNU6-1023P-201ENST00000516137 106 ntBASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 AC012493.3-201ENST00000604494 112 ntBASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 AC069114.2-201ENST00000604699 304 ntBASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 AL773524.1-201ENST00000614065 229 ntBASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
ZC3HC1Q86WB0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.20-201ENST00000362479 113 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.54-201ENST00000362766 105 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 RNU6-1272P-201ENST00000362776 107 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 SNORA72.4-201ENST00000384174 132 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.478-201ENST00000384358 107 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 RNU6-1289P-201ENST00000384431 106 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 RNU6-376P-201ENST00000384731 106 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 RNA5SP212-201ENST00000391223 107 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 AC104332.1-201ENST00000440471 797 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 U8.19-201ENST00000459095 133 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 AC107393.1-201ENST00000512403 346 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 RNU6-1271P-201ENST00000517049 105 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 AC110588.1-201ENST00000559699 137 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 MIR4419B-201ENST00000577260 68 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 AC091178.2-201ENST00000584401 117 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 AC005972.2-201ENST00000604690 348 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 AL078604.3-201ENST00000615580 211 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 snoU18.1-201ENST00000629629 71 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 AC068647.2-201ENST00000637380 353 ntBASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
ZC3HC1Q86WB0 AC068700.1-201ENST00000565862 3754 ntBASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 Y_RNA.111-201ENST00000363248 100 ntBASIC1.8□□□□□ -2.12
ZC3HC1Q86WB0 SNORD27-201ENST00000363981 72 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms