Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 Y_RNA.572-201ENST00000384757 98 ntBASIC2.64□□□□□ -1.99
DDX53Q86TM3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.64□□□□□ -1.99
DDX53Q86TM3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.64□□□□□ -1.99
DDX53Q86TM3 RPS15AP28-201ENST00000435088 386 ntBASIC2.64□□□□□ -1.99
DDX53Q86TM3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.64□□□□□ -1.99
DDX53Q86TM3 RPS27AP9-201ENST00000477681 438 ntBASIC2.64□□□□□ -1.99
DDX53Q86TM3 RPL23AP54-201ENST00000495129 419 ntBASIC2.64□□□□□ -1.99
DDX53Q86TM3 RNU7-99P-201ENST00000516271 62 ntBASIC2.64□□□□□ -1.99
DDX53Q86TM3 RNU6-861P-201ENST00000516745 106 ntBASIC2.64□□□□□ -1.99
DDX53Q86TM3 RNU6-826P-201ENST00000516827 104 ntBASIC2.64□□□□□ -1.99
DDX53Q86TM3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.64□□□□□ -1.99
DDX53Q86TM3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.64□□□□□ -1.99
DDX53Q86TM3 AC072026.1-201ENST00000605023 201 ntBASIC2.64□□□□□ -1.99
DDX53Q86TM3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.64□□□□□ -1.99
DDX53Q86TM3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
DDX53Q86TM3 Y_RNA.24-201ENST00000362508 103 ntBASIC2.63□□□□□ -1.99
DDX53Q86TM3 RNA5SP456-201ENST00000364002 114 ntBASIC2.63□□□□□ -1.99
DDX53Q86TM3 RNU6-144P-201ENST00000383951 107 ntBASIC2.63□□□□□ -1.99
DDX53Q86TM3 MIR626-201ENST00000385032 94 ntBASIC2.63□□□□□ -1.99
DDX53Q86TM3 RNA5SP323-201ENST00000391094 133 ntBASIC2.63□□□□□ -1.99
DDX53Q86TM3 AL356320.1-201ENST00000429616 163 ntBASIC2.63□□□□□ -1.99
DDX53Q86TM3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.63□□□□□ -1.99
DDX53Q86TM3 AC099677.2-201ENST00000436385 175 ntBASIC2.63□□□□□ -1.99
DDX53Q86TM3 RPS4XP11-201ENST00000446897 772 ntBASIC2.63□□□□□ -1.99
DDX53Q86TM3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.63□□□□□ -1.99
DDX53Q86TM3 AC234781.5-201ENST00000508429 271 ntBASIC2.63□□□□□ -1.99
DDX53Q86TM3 RNU1-142P-201ENST00000516682 145 ntBASIC2.63□□□□□ -1.99
DDX53Q86TM3 SNORD14A-201ENST00000606526 91 ntBASIC2.63□□□□□ -1.99
DDX53Q86TM3 AC022513.1-201ENST00000624512 117 ntBASIC2.63□□□□□ -1.99
DDX53Q86TM3 U6.108-201ENST00000637764 58 ntBASIC2.63□□□□□ -1.99
DDX53Q86TM3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
DDX53Q86TM3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.62□□□□□ -1.99
DDX53Q86TM3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.62□□□□□ -1.99
DDX53Q86TM3 MIR367-201ENST00000362299 68 ntBASIC2.62□□□□□ -1.99
DDX53Q86TM3 RNU6-682P-201ENST00000363843 106 ntBASIC2.62□□□□□ -1.99
DDX53Q86TM3 Y_RNA.233-201ENST00000364407 101 ntBASIC2.62□□□□□ -1.99
DDX53Q86TM3 RNU6-969P-201ENST00000383900 105 ntBASIC2.62□□□□□ -1.99
DDX53Q86TM3 Y_RNA.555-201ENST00000384673 110 ntBASIC2.62□□□□□ -1.99
DDX53Q86TM3 MIR597-201ENST00000384968 97 ntBASIC2.62□□□□□ -1.99
DDX53Q86TM3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.62□□□□□ -1.99
DDX53Q86TM3 RNU2-2P-201ENST00000410396 191 ntBASIC2.62□□□□□ -1.99
DDX53Q86TM3 RN7SKP223-201ENST00000410582 62 ntBASIC2.62□□□□□ -1.99
DDX53Q86TM3 RNU6-383P-201ENST00000410864 94 ntBASIC2.62□□□□□ -1.99
DDX53Q86TM3 HMGN2P35-201ENST00000412164 270 ntBASIC2.62□□□□□ -1.99
DDX53Q86TM3 CST2P1-201ENST00000425770 87 ntBASIC2.62□□□□□ -1.99
DDX53Q86TM3 MIR4724-201ENST00000579485 89 ntBASIC2.62□□□□□ -1.99
DDX53Q86TM3 RNU2-4P-201ENST00000606190 192 ntBASIC2.62□□□□□ -1.99
DDX53Q86TM3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
DDX53Q86TM3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
DDX53Q86TM3 Y_RNA.7-201ENST00000362352 102 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 SNORD114-30-201ENST00000364448 72 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 SNORA72-201ENST00000384339 132 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 SNORA8-201ENST00000384574 139 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 Y_RNA.571-201ENST00000384753 98 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 MIR526A2-201ENST00000390198 65 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 RNA5SP210-201ENST00000391034 120 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 RNU11-3P-201ENST00000391111 133 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 RNU6-381P-201ENST00000391259 108 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 AC007064.1-201ENST00000412238 351 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.61□□□□□ -1.99
DDX53Q86TM3 AC091021.1-201ENST00000468051 388 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 RNU6-1096P-201ENST00000517089 102 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 AC004486.1-201ENST00000546846 233 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 MIR4648-201ENST00000580107 72 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 MIR3670-2-201ENST00000582974 65 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 MIR5092-201ENST00000583139 88 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 MIR3670-1-201ENST00000584160 65 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 MIR3670-3-201ENST00000584855 65 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 MIR3670-4-201ENST00000612260 65 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
DDX53Q86TM3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
DDX53Q86TM3 AC016717.2-201ENST00000609089 5141 ntBASIC2.61□□□□□ -1.99
DDX53Q86TM3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.61□□□□□ -1.99
DDX53Q86TM3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
DDX53Q86TM3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.6□□□□□ -1.99
DDX53Q86TM3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
DDX53Q86TM3 snoU2_19.4-201ENST00000364329 80 ntBASIC2.6□□□□□ -1.99
DDX53Q86TM3 Y_RNA.238-201ENST00000364441 102 ntBASIC2.6□□□□□ -1.99
DDX53Q86TM3 Y_RNA.435-201ENST00000384095 112 ntBASIC2.6□□□□□ -1.99
DDX53Q86TM3 RNU6-886P-201ENST00000384319 105 ntBASIC2.6□□□□□ -1.99
DDX53Q86TM3 MIR518A2-201ENST00000384966 87 ntBASIC2.6□□□□□ -1.99
DDX53Q86TM3 RN7SKP51-201ENST00000410781 304 ntBASIC2.6□□□□□ -1.99
DDX53Q86TM3 RNU6-437P-201ENST00000459408 95 ntBASIC2.6□□□□□ -1.99
DDX53Q86TM3 RNU6-1219P-201ENST00000516143 112 ntBASIC2.6□□□□□ -1.99
DDX53Q86TM3 Y_RNA.676-201ENST00000516393 96 ntBASIC2.6□□□□□ -1.99
DDX53Q86TM3 AC005786.1-201ENST00000588553 154 ntBASIC2.6□□□□□ -1.99
DDX53Q86TM3 AL929325.1-201ENST00000603096 117 ntBASIC2.6□□□□□ -1.99
DDX53Q86TM3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.6□□□□□ -1.99
DDX53Q86TM3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
DDX53Q86TM3 RNU4-70P-201ENST00000384579 139 ntBASIC2.59□□□□□ -1.99
DDX53Q86TM3 MIR515-2-201ENST00000384883 83 ntBASIC2.59□□□□□ -1.99
DDX53Q86TM3 MIR515-1-201ENST00000384884 83 ntBASIC2.59□□□□□ -1.99
DDX53Q86TM3 HMGN2P39-201ENST00000398005 273 ntBASIC2.59□□□□□ -1.99
DDX53Q86TM3 MIR1283-2-201ENST00000408621 87 ntBASIC2.59□□□□□ -1.99
DDX53Q86TM3 RNA5SP270-201ENST00000411361 118 ntBASIC2.59□□□□□ -1.99
DDX53Q86TM3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX53Q86TM3 AC018634.1-201ENST00000437554 401 ntBASIC2.59□□□□□ -1.99
DDX53Q86TM3 AL163195.1-201ENST00000496941 348 ntBASIC2.59□□□□□ -1.99
DDX53Q86TM3 IGKV3-31-201ENST00000523109 329 ntBASIC2.59□□□□□ -1.99
DDX53Q86TM3 AC011604.1-201ENST00000545978 196 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms