Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 RNU6-950P-201ENST00000384651 107 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 Y_RNA.570-201ENST00000384750 101 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 RPL30P13-201ENST00000418873 348 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 PMCHL1-202ENST00000423102 261 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 Y_RNA.639-201ENST00000458981 102 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 RNA5SP102-201ENST00000516865 106 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 RN7SKP295-201ENST00000517264 153 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 AC093027.1-201ENST00000546698 429 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 POLR3GP1-201ENST00000594073 261 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 AC021506.2-201ENST00000612354 169 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 AL161722.3-201ENST00000605789 2983 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 MIR126-201ENST00000362291 85 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 SNORD115-30-201ENST00000364117 82 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 Y_RNA.356-201ENST00000365475 113 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 SNORD26-201ENST00000384147 75 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 Y_RNA.460-201ENST00000384255 102 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 SNORD116-13-201ENST00000384408 92 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 RNU6-1297P-201ENST00000384415 104 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 Y_RNA.498-201ENST00000384460 102 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 Y_RNA.540-201ENST00000384638 111 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 SNORA53-201ENST00000391141 249 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 MIR548P-201ENST00000408336 84 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 HMGN1P10-201ENST00000474557 553 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 RPL26P26-201ENST00000480251 434 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 RNU6-976P-201ENST00000516086 111 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 AC027419.1-201ENST00000522976 328 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 MIR4452-201ENST00000583004 71 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 AC010205.1-201ENST00000616668 449 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 MIR6767-201ENST00000637302 66 ntBASIC1.19□□□□□ -2.22
RAI1Q7Z5J4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 RNU6-879P-201ENST00000364328 108 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 SNORA33.2-201ENST00000365413 134 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 RNU6-20P-201ENST00000384106 107 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 RNU6-505P-201ENST00000384427 107 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 RNU6-738P-201ENST00000384531 106 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 RNU6-440P-201ENST00000390882 105 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 RNU6-1009P-201ENST00000390996 107 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 RNU6-823P-201ENST00000391042 103 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 MIR1302-11-201ENST00000408051 138 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 MIR1302-9-201ENST00000408365 138 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 MIR1302-10-201ENST00000408734 138 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 AC009474.2-201ENST00000451383 136 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 COX6CP14-201ENST00000469580 174 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 CYCSP23-201ENST00000519781 313 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 AP003072.1-201ENST00000531740 145 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 RPL21P9-201ENST00000556149 474 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 MIR1302-2-201ENST00000607096 138 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 MIR7974-201ENST00000615835 79 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 AL121890.5-201ENST00000620848 304 ntBASIC1.18□□□□□ -2.22
RAI1Q7Z5J4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 Y_RNA.329-201ENST00000365209 107 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 Y_RNA.395-201ENST00000383945 109 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 HSPE1P9-201ENST00000440046 311 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 JTBP1-201ENST00000441314 247 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 AC105758.1-201ENST00000506038 399 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 RNA5SP61-201ENST00000516453 100 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 MIR4659A-201ENST00000580269 81 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 AC125232.2-201ENST00000592457 143 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 AC005176.2-201ENST00000596933 147 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 AL929325.1-201ENST00000603096 117 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 SNORD113-5-201ENST00000607261 78 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 AC011373.1-201ENST00000607270 237 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 AC008873.1-201ENST00000625051 138 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 RNU4-90P-201ENST00000362773 141 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 Y_RNA.551-201ENST00000384661 102 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 RNA5SP482-201ENST00000391269 118 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 RNU6-130P-201ENST00000411112 103 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 AL390729.2-201ENST00000416137 156 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 RPS20P10-201ENST00000451209 253 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 RNU6-341P-201ENST00000516973 96 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 MIR5692C2-201ENST00000577959 77 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 MIR4422-201ENST00000581938 83 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 Y_RNA.772-201ENST00000606692 102 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 AL021879.1-201ENST00000611756 288 ntBASIC1.17□□□□□ -2.22
RAI1Q7Z5J4 Y_RNA.341-201ENST00000365341 102 ntBASIC1.16□□□□□ -2.22
RAI1Q7Z5J4 Y_RNA.509-201ENST00000384506 99 ntBASIC1.16□□□□□ -2.22
RAI1Q7Z5J4 RNU1-78P-201ENST00000391248 165 ntBASIC1.16□□□□□ -2.22
RAI1Q7Z5J4 AC016909.1-201ENST00000415916 166 ntBASIC1.16□□□□□ -2.22
RAI1Q7Z5J4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.16□□□□□ -2.22
RAI1Q7Z5J4 RNU6-1291P-201ENST00000516591 104 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 590.8 ms