Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 AC092447.9-201ENST00000603395 144 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 AC091304.9-201ENST00000612091 226 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 AC009248.2-201ENST00000619826 254 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 AC127459.3-201ENST00000624328 466 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 SNORA36.1-201ENST00000363424 132 ntBASIC-0.5□□□□□ -2.49
USP54Q70EL1 MIR487A-201ENST00000385009 80 ntBASIC-0.5□□□□□ -2.49
USP54Q70EL1 AL390729.2-201ENST00000416137 156 ntBASIC-0.5□□□□□ -2.49
USP54Q70EL1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.5□□□□□ -2.49
USP54Q70EL1 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.5□□□□□ -2.49
USP54Q70EL1 AL359672.1-201ENST00000442302 409 ntBASIC-0.5□□□□□ -2.49
USP54Q70EL1 AL353572.1-201ENST00000442490 417 ntBASIC-0.5□□□□□ -2.49
USP54Q70EL1 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.5□□□□□ -2.49
USP54Q70EL1 AC023442.1-201ENST00000531247 422 ntBASIC-0.5□□□□□ -2.49
USP54Q70EL1 AC020891.4-201ENST00000605745 93 ntBASIC-0.5□□□□□ -2.49
USP54Q70EL1 SNORD115-24-201ENST00000363528 82 ntBASIC-0.51□□□□□ -2.49
USP54Q70EL1 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.51□□□□□ -2.49
USP54Q70EL1 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.51□□□□□ -2.49
USP54Q70EL1 MIR153-2-201ENST00000385225 87 ntBASIC-0.51□□□□□ -2.49
USP54Q70EL1 RNU4-63P-201ENST00000411313 118 ntBASIC-0.51□□□□□ -2.49
USP54Q70EL1 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.51□□□□□ -2.49
USP54Q70EL1 USP9YP12-201ENST00000450481 570 ntBASIC-0.51□□□□□ -2.49
USP54Q70EL1 MIR18B-201ENST00000454574 71 ntBASIC-0.51□□□□□ -2.49
USP54Q70EL1 RNU7-102P-201ENST00000458948 62 ntBASIC-0.51□□□□□ -2.49
USP54Q70EL1 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.51□□□□□ -2.49
USP54Q70EL1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.51□□□□□ -2.49
USP54Q70EL1 MIR3684-201ENST00000579779 74 ntBASIC-0.51□□□□□ -2.49
USP54Q70EL1 AC022306.3-201ENST00000619930 550 ntBASIC-0.51□□□□□ -2.49
USP54Q70EL1 SNORD38B-202ENST00000625943 69 ntBASIC-0.51□□□□□ -2.49
USP54Q70EL1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.52□□□□□ -2.49
USP54Q70EL1 SNORA27.1-201ENST00000362604 124 ntBASIC-0.52□□□□□ -2.49
USP54Q70EL1 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.52□□□□□ -2.49
USP54Q70EL1 MIR548H2-201ENST00000408874 88 ntBASIC-0.52□□□□□ -2.49
USP54Q70EL1 CPDP1-201ENST00000579660 283 ntBASIC-0.52□□□□□ -2.49
USP54Q70EL1 AC006157.1-201ENST00000611750 366 ntBASIC-0.52□□□□□ -2.49
USP54Q70EL1 RNY4P34-201ENST00000364779 95 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 SNORD14C-201ENST00000365382 88 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 RNU6-756P-201ENST00000383997 107 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 RNU6-517P-201ENST00000384362 110 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 PCNPP3-201ENST00000393579 471 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.53□□□□□ -2.49
USP54Q70EL1 AC005042.3-201ENST00000453230 174 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.53□□□□□ -2.49
USP54Q70EL1 RNU6-63P-201ENST00000516690 95 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 AL157687.1-201ENST00000554853 619 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 AC018714.1-201ENST00000605028 208 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 MIR548AZ-201ENST00000616567 95 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 AL158209.2-201ENST00000619266 216 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.53□□□□□ -2.49
USP54Q70EL1 AC116353.2-201ENST00000505332 712 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 SNORD27.1-201ENST00000516319 72 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 SNORD45.4-201ENST00000516629 73 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 RNU7-156P-201ENST00000517214 74 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 MTND4P7-201ENST00000523876 130 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 MIR4509-3-201ENST00000578671 94 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 MIR4509-2-201ENST00000583920 94 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 SNORD92-201ENST00000585078 85 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 AC010525.2-201ENST00000590920 195 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 AP000811.1-201ENST00000603803 651 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 AC069431.2-201ENST00000604149 1099 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 MIR4509-1-201ENST00000618224 94 ntBASIC-0.53□□□□□ -2.49
USP54Q70EL1 SNORD114-7-201ENST00000362520 77 ntBASIC-0.54□□□□□ -2.5
USP54Q70EL1 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.54□□□□□ -2.5
USP54Q70EL1 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.54□□□□□ -2.5
USP54Q70EL1 RNU6-933P-201ENST00000384424 107 ntBASIC-0.54□□□□□ -2.5
USP54Q70EL1 AL358934.1-201ENST00000432346 324 ntBASIC-0.54□□□□□ -2.5
USP54Q70EL1 AC084290.1-201ENST00000434995 374 ntBASIC-0.54□□□□□ -2.5
USP54Q70EL1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.54□□□□□ -2.5
USP54Q70EL1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.54□□□□□ -2.5
USP54Q70EL1 RNU6-107P-201ENST00000516643 102 ntBASIC-0.54□□□□□ -2.5
USP54Q70EL1 AL137161.1-201ENST00000532231 390 ntBASIC-0.54□□□□□ -2.5
USP54Q70EL1 AL136370.1-201ENST00000608166 691 ntBASIC-0.54□□□□□ -2.5
USP54Q70EL1 AC006566.1-201ENST00000608943 513 ntBASIC-0.54□□□□□ -2.5
USP54Q70EL1 FTX_2.1-201ENST00000618816 94 ntBASIC-0.54□□□□□ -2.5
USP54Q70EL1 MIR499B-201ENST00000636498 73 ntBASIC-0.54□□□□□ -2.5
USP54Q70EL1 MIR377-201ENST00000362145 69 ntBASIC-0.55□□□□□ -2.5
USP54Q70EL1 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.55□□□□□ -2.5
USP54Q70EL1 SNORD38C-201ENST00000384381 69 ntBASIC-0.55□□□□□ -2.5
USP54Q70EL1 RNU6-636P-201ENST00000384598 107 ntBASIC-0.55□□□□□ -2.5
USP54Q70EL1 RNU6-606P-201ENST00000384721 111 ntBASIC-0.55□□□□□ -2.5
USP54Q70EL1 MIR760-201ENST00000390220 80 ntBASIC-0.55□□□□□ -2.5
USP54Q70EL1 RNU6-127P-201ENST00000390897 107 ntBASIC-0.55□□□□□ -2.5
USP54Q70EL1 AL033528.1-201ENST00000453780 140 ntBASIC-0.55□□□□□ -2.5
USP54Q70EL1 MTCO3P38-201ENST00000468910 766 ntBASIC-0.55□□□□□ -2.5
USP54Q70EL1 RPL39P34-201ENST00000477141 156 ntBASIC-0.55□□□□□ -2.5
USP54Q70EL1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.55□□□□□ -2.5
USP54Q70EL1 AC008608.1-201ENST00000603910 127 ntBASIC-0.55□□□□□ -2.5
USP54Q70EL1 AL591926.4-201ENST00000616895 298 ntBASIC-0.55□□□□□ -2.5
USP54Q70EL1 AC098679.4-201ENST00000624241 654 ntBASIC-0.55□□□□□ -2.5
USP54Q70EL1 AC009161.2-201ENST00000624626 138 ntBASIC-0.55□□□□□ -2.5
USP54Q70EL1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.56□□□□□ -2.5
USP54Q70EL1 BTF3P11-201ENST00000426582 477 ntBASIC-0.56□□□□□ -2.5
USP54Q70EL1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.56□□□□□ -2.5
USP54Q70EL1 AL137792.2-201ENST00000443484 235 ntBASIC-0.56□□□□□ -2.5
USP54Q70EL1 RNU6-469P-201ENST00000516253 101 ntBASIC-0.56□□□□□ -2.5
USP54Q70EL1 RNA5SP67-201ENST00000516422 131 ntBASIC-0.56□□□□□ -2.5
USP54Q70EL1 AC091144.1-201ENST00000519573 138 ntBASIC-0.56□□□□□ -2.5
USP54Q70EL1 IGKV1-22-201ENST00000524313 326 ntBASIC-0.56□□□□□ -2.5
USP54Q70EL1 AC087683.2-201ENST00000611384 326 ntBASIC-0.56□□□□□ -2.5
USP54Q70EL1 AC099654.13-201ENST00000639774 207 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms