Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 RNU6-1175P-201ENST00000365200 107 ntBASIC1.29□□□□□ -2.2
ZNF544Q6NX49 RNU6-1160P-201ENST00000384546 104 ntBASIC1.29□□□□□ -2.2
ZNF544Q6NX49 Y_RNA.527-201ENST00000384573 102 ntBASIC1.29□□□□□ -2.2
ZNF544Q6NX49 MIR150-201ENST00000385048 84 ntBASIC1.29□□□□□ -2.2
ZNF544Q6NX49 MIR30A-201ENST00000385092 71 ntBASIC1.29□□□□□ -2.2
ZNF544Q6NX49 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.29□□□□□ -2.2
ZNF544Q6NX49 AL590004.1-201ENST00000405321 300 ntBASIC1.29□□□□□ -2.2
ZNF544Q6NX49 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.29□□□□□ -2.2
ZNF544Q6NX49 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
ZNF544Q6NX49 RPS26P55-201ENST00000471178 356 ntBASIC1.29□□□□□ -2.2
ZNF544Q6NX49 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.29□□□□□ -2.2
ZNF544Q6NX49 AC097462.1-201ENST00000514125 324 ntBASIC1.29□□□□□ -2.2
ZNF544Q6NX49 RNU6-966P-201ENST00000516479 104 ntBASIC1.29□□□□□ -2.2
ZNF544Q6NX49 RNU6-897P-201ENST00000517135 105 ntBASIC1.29□□□□□ -2.2
ZNF544Q6NX49 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.29□□□□□ -2.2
ZNF544Q6NX49 AC084364.2-201ENST00000546924 395 ntBASIC1.29□□□□□ -2.2
ZNF544Q6NX49 AL161670.1-201ENST00000554348 137 ntBASIC1.29□□□□□ -2.2
ZNF544Q6NX49 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.29□□□□□ -2.2
ZNF544Q6NX49 AL359821.1-201ENST00000605519 182 ntBASIC1.29□□□□□ -2.2
ZNF544Q6NX49 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.29□□□□□ -2.2
ZNF544Q6NX49 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
ZNF544Q6NX49 MIR424-201ENST00000362227 98 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 MIR337-201ENST00000362281 93 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 SNORD81.1-201ENST00000363064 77 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 RNY1P10-201ENST00000363268 113 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 Y_RNA.222-201ENST00000364264 102 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 SNORA63C-201ENST00000364578 129 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 RNU6-117P-201ENST00000365415 107 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 RNA5SP467-201ENST00000391274 118 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 RPL21P1-201ENST00000399532 476 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 AL031003.1-201ENST00000404229 172 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 RNU2-61P-201ENST00000411069 191 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 EBAG9P1-201ENST00000418955 543 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 AC015922.2-201ENST00000435593 184 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 HSPE1P13-201ENST00000451143 297 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 AC005042.3-201ENST00000453230 174 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 AC010655.3-201ENST00000478818 450 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 AC010409.1-201ENST00000487382 476 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 RNU6-436P-201ENST00000516171 114 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 RNU1-92P-201ENST00000517017 135 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 AC131281.1-201ENST00000522984 164 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 AC015720.1-201ENST00000565251 277 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 MIR4300-201ENST00000581016 96 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 MIR4438-201ENST00000585271 93 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 AC006504.6-201ENST00000590142 199 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 AC006380.1-201ENST00000603598 186 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 AC127459.3-201ENST00000624328 466 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 AC010615.1-201ENST00000594254 1764 ntBASIC1.28□□□□□ -2.2
ZNF544Q6NX49 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
ZNF544Q6NX49 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
ZNF544Q6NX49 Y_RNA.143-201ENST00000363520 106 ntBASIC1.27□□□□□ -2.21
ZNF544Q6NX49 Y_RNA.214-201ENST00000364201 112 ntBASIC1.27□□□□□ -2.21
ZNF544Q6NX49 RNU6-937P-201ENST00000384325 106 ntBASIC1.27□□□□□ -2.21
ZNF544Q6NX49 RNU6-738P-201ENST00000384531 106 ntBASIC1.27□□□□□ -2.21
ZNF544Q6NX49 MIR520A-201ENST00000384862 85 ntBASIC1.27□□□□□ -2.21
ZNF544Q6NX49 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
ZNF544Q6NX49 RNU6-121P-201ENST00000410525 99 ntBASIC1.27□□□□□ -2.21
ZNF544Q6NX49 RPL30P13-201ENST00000418873 348 ntBASIC1.27□□□□□ -2.21
ZNF544Q6NX49 AC010154.1-201ENST00000425857 269 ntBASIC1.27□□□□□ -2.21
ZNF544Q6NX49 RPS27P1-201ENST00000450552 247 ntBASIC1.27□□□□□ -2.21
ZNF544Q6NX49 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.27□□□□□ -2.21
ZNF544Q6NX49 RNA5SP20-201ENST00000515976 84 ntBASIC1.27□□□□□ -2.21
ZNF544Q6NX49 SNORA70.12-201ENST00000516084 153 ntBASIC1.27□□□□□ -2.21
ZNF544Q6NX49 RNU6-155P-201ENST00000516347 100 ntBASIC1.27□□□□□ -2.21
ZNF544Q6NX49 RNU6-1046P-201ENST00000516538 107 ntBASIC1.27□□□□□ -2.21
ZNF544Q6NX49 RNU1-142P-201ENST00000516682 145 ntBASIC1.27□□□□□ -2.21
ZNF544Q6NX49 AC011373.1-201ENST00000607270 237 ntBASIC1.27□□□□□ -2.21
ZNF544Q6NX49 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.27□□□□□ -2.21
ZNF544Q6NX49 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
ZNF544Q6NX49 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.27□□□□□ -2.21
ZNF544Q6NX49 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
ZNF544Q6NX49 AC245060.5-201ENST00000610778 3293 ntBASIC1.27□□□□□ -2.21
ZNF544Q6NX49 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
ZNF544Q6NX49 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
ZNF544Q6NX49 Y_RNA.4-201ENST00000362333 112 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 U8.1-201ENST00000362843 134 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 Y_RNA.124-201ENST00000363339 93 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 Y_RNA.152-201ENST00000363578 100 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 MIR606-201ENST00000384851 96 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.26□□□□□ -2.21
ZNF544Q6NX49 MIR1323-201ENST00000408090 73 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 MIR548F4-201ENST00000408515 105 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 RNU6-321P-201ENST00000410912 106 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 ELOCP20-201ENST00000422460 345 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 AL354695.1-201ENST00000427935 228 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 RPS27P22-201ENST00000478056 241 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.26□□□□□ -2.21
ZNF544Q6NX49 AL163195.1-201ENST00000496941 348 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 SEPT14P8-201ENST00000508026 178 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 RNU6-1143P-201ENST00000516125 104 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 SNORA31.17-201ENST00000516953 127 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 RNA5SP437-201ENST00000517249 129 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.26□□□□□ -2.21
ZNF544Q6NX49 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.26□□□□□ -2.21
ZNF544Q6NX49 AC023157.2-201ENST00000540596 141 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 SNORD113-5-201ENST00000607261 78 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 MIR376A1-201ENST00000616574 68 ntBASIC1.26□□□□□ -2.21
ZNF544Q6NX49 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.26□□□□□ -2.21
ZNF544Q6NX49 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
ZNF544Q6NX49 AL391987.6-201ENST00000305671 199 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms