Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 RNU7-94P-201ENST00000459576 63 ntBASIC2.14□□□□□ -2.07
PPP4R4Q6NUP7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.14□□□□□ -2.07
PPP4R4Q6NUP7 RNU2-31P-201ENST00000516954 155 ntBASIC2.14□□□□□ -2.07
PPP4R4Q6NUP7 AL929325.1-201ENST00000603096 117 ntBASIC2.14□□□□□ -2.07
PPP4R4Q6NUP7 AC046143.2-201ENST00000609789 160 ntBASIC2.14□□□□□ -2.07
PPP4R4Q6NUP7 AL590808.1-201ENST00000618696 141 ntBASIC2.14□□□□□ -2.07
PPP4R4Q6NUP7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PPP4R4Q6NUP7 Y_RNA.149-201ENST00000363558 117 ntBASIC2.13□□□□□ -2.07
PPP4R4Q6NUP7 Y_RNA.341-201ENST00000365341 102 ntBASIC2.13□□□□□ -2.07
PPP4R4Q6NUP7 RNU2-14P-201ENST00000411053 191 ntBASIC2.13□□□□□ -2.07
PPP4R4Q6NUP7 AL161935.2-201ENST00000414627 60 ntBASIC2.13□□□□□ -2.07
PPP4R4Q6NUP7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.13□□□□□ -2.07
PPP4R4Q6NUP7 RNA5SP281-201ENST00000516504 135 ntBASIC2.13□□□□□ -2.07
PPP4R4Q6NUP7 RNU6-1291P-201ENST00000516591 104 ntBASIC2.13□□□□□ -2.07
PPP4R4Q6NUP7 RNU6-1096P-201ENST00000517089 102 ntBASIC2.13□□□□□ -2.07
PPP4R4Q6NUP7 DEFB108E-201ENST00000524692 240 ntBASIC2.13□□□□□ -2.07
PPP4R4Q6NUP7 MIR3124-201ENST00000582636 67 ntBASIC2.13□□□□□ -2.07
PPP4R4Q6NUP7 MIR6766-201ENST00000622641 72 ntBASIC2.13□□□□□ -2.07
PPP4R4Q6NUP7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 MIR424-201ENST00000362227 98 ntBASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 SNORA1B-201ENST00000362535 133 ntBASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 RNU6-1048P-201ENST00000364054 107 ntBASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 Y_RNA.237-201ENST00000364439 102 ntBASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 RNU6-950P-201ENST00000384651 107 ntBASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 SNORA67.4-201ENST00000384688 142 ntBASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 SNORA26.5-201ENST00000391215 123 ntBASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 RNU4-53P-201ENST00000410828 140 ntBASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 COX6CP10-201ENST00000416832 224 ntBASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 AC091959.1-201ENST00000495857 238 ntBASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 SERF1AP1-201ENST00000514575 187 ntBASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 AC091544.4-201ENST00000555268 342 ntBASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 MIR5002-201ENST00000584713 97 ntBASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 AC068700.1-201ENST00000565862 3754 ntBASIC2.12□□□□□ -2.07
PPP4R4Q6NUP7 AC100821.1-201ENST00000523153 2479 ntBASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 SNORA72.4-201ENST00000384174 132 ntBASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 MIR520G-201ENST00000385064 90 ntBASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 RNU6-440P-201ENST00000390882 105 ntBASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 RNU11-5P-201ENST00000391216 129 ntBASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 MIR934-201ENST00000401241 83 ntBASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 MIR1267-201ENST00000408723 78 ntBASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 AC104332.1-201ENST00000440471 797 ntBASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 RNU6-717P-201ENST00000459076 104 ntBASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 AC136628.3-201ENST00000521868 290 ntBASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 MIR4709-201ENST00000577272 72 ntBASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 AC005972.2-201ENST00000604690 348 ntBASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 AC095038.3-201ENST00000634439 195 ntBASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.11□□□□□ -2.07
PPP4R4Q6NUP7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PPP4R4Q6NUP7 Y_RNA.267-201ENST00000364679 109 ntBASIC2.1□□□□□ -2.07
PPP4R4Q6NUP7 RNU6-203P-201ENST00000384038 104 ntBASIC2.1□□□□□ -2.07
PPP4R4Q6NUP7 SNORA70B-201ENST00000384210 135 ntBASIC2.1□□□□□ -2.07
PPP4R4Q6NUP7 MIR194-1-201ENST00000384892 85 ntBASIC2.1□□□□□ -2.07
PPP4R4Q6NUP7 RNA5SP338-201ENST00000410495 85 ntBASIC2.1□□□□□ -2.07
PPP4R4Q6NUP7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.1□□□□□ -2.07
PPP4R4Q6NUP7 MIR5007-201ENST00000583098 95 ntBASIC2.1□□□□□ -2.07
PPP4R4Q6NUP7 AL162730.1-201ENST00000605734 292 ntBASIC2.1□□□□□ -2.07
PPP4R4Q6NUP7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.1□□□□□ -2.07
PPP4R4Q6NUP7 MIR6715A-201ENST00000615929 79 ntBASIC2.1□□□□□ -2.07
PPP4R4Q6NUP7 AC064859.1-201ENST00000624741 174 ntBASIC2.1□□□□□ -2.07
PPP4R4Q6NUP7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PPP4R4Q6NUP7 Y_RNA.217-201ENST00000364214 105 ntBASIC2.09□□□□□ -2.07
PPP4R4Q6NUP7 RNA5SP138-201ENST00000365098 114 ntBASIC2.09□□□□□ -2.07
PPP4R4Q6NUP7 RNU6-1323P-201ENST00000384025 107 ntBASIC2.09□□□□□ -2.07
PPP4R4Q6NUP7 SNORA53-201ENST00000391141 249 ntBASIC2.09□□□□□ -2.07
PPP4R4Q6NUP7 RN7SKP192-201ENST00000411291 327 ntBASIC2.09□□□□□ -2.07
PPP4R4Q6NUP7 AC024067.1-201ENST00000426199 223 ntBASIC2.09□□□□□ -2.07
PPP4R4Q6NUP7 Y_RNA.641-201ENST00000459414 105 ntBASIC2.09□□□□□ -2.07
PPP4R4Q6NUP7 AC005908.1-201ENST00000468701 347 ntBASIC2.09□□□□□ -2.07
PPP4R4Q6NUP7 RPS29P21-201ENST00000496272 170 ntBASIC2.09□□□□□ -2.07
PPP4R4Q6NUP7 SCARNA24.2-201ENST00000516968 130 ntBASIC2.09□□□□□ -2.07
PPP4R4Q6NUP7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.09□□□□□ -2.07
PPP4R4Q6NUP7 AP003357.1-201ENST00000604497 148 ntBASIC2.09□□□□□ -2.07
PPP4R4Q6NUP7 AC103810.6-201ENST00000606708 136 ntBASIC2.09□□□□□ -2.07
PPP4R4Q6NUP7 AC021506.2-201ENST00000612354 169 ntBASIC2.09□□□□□ -2.07
PPP4R4Q6NUP7 AC068647.2-201ENST00000637380 353 ntBASIC2.09□□□□□ -2.07
PPP4R4Q6NUP7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.09□□□□□ -2.07
PPP4R4Q6NUP7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
PPP4R4Q6NUP7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PPP4R4Q6NUP7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PPP4R4Q6NUP7 U8.2-201ENST00000363156 134 ntBASIC2.08□□□□□ -2.08
PPP4R4Q6NUP7 U8.7-201ENST00000364940 136 ntBASIC2.08□□□□□ -2.08
PPP4R4Q6NUP7 RNU6-338P-201ENST00000383888 105 ntBASIC2.08□□□□□ -2.08
PPP4R4Q6NUP7 RNU6-1031P-201ENST00000384773 107 ntBASIC2.08□□□□□ -2.08
PPP4R4Q6NUP7 RNU6-763P-201ENST00000390865 106 ntBASIC2.08□□□□□ -2.08
PPP4R4Q6NUP7 MIR1302-6-201ENST00000408466 90 ntBASIC2.08□□□□□ -2.08
PPP4R4Q6NUP7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.08□□□□□ -2.08
PPP4R4Q6NUP7 snoU13.9-201ENST00000458927 103 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms