Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CCDC144NLQ6NUI1 RNU6-112P-201ENST00000363599 104 ntBASIC2□□□□□ -2.09
CCDC144NLQ6NUI1 SNORA63D-201ENST00000364359 132 ntBASIC2□□□□□ -2.09
CCDC144NLQ6NUI1 Y_RNA.267-201ENST00000364679 109 ntBASIC2□□□□□ -2.09
CCDC144NLQ6NUI1 MIR520A-201ENST00000384862 85 ntBASIC2□□□□□ -2.09
CCDC144NLQ6NUI1 MIR562-201ENST00000384894 95 ntBASIC2□□□□□ -2.09
CCDC144NLQ6NUI1 RNA5SP109-201ENST00000391010 116 ntBASIC2□□□□□ -2.09
CCDC144NLQ6NUI1 AL359511.1-201ENST00000402970 211 ntBASIC2□□□□□ -2.09
CCDC144NLQ6NUI1 AL355497.1-201ENST00000406262 551 ntBASIC2□□□□□ -2.09
CCDC144NLQ6NUI1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2□□□□□ -2.09
CCDC144NLQ6NUI1 Y_RNA.638-201ENST00000459374 113 ntBASIC2□□□□□ -2.09
CCDC144NLQ6NUI1 RNA5SP320-201ENST00000516263 124 ntBASIC2□□□□□ -2.09
CCDC144NLQ6NUI1 RNU6-388P-201ENST00000517012 105 ntBASIC2□□□□□ -2.09
CCDC144NLQ6NUI1 RNU6-389P-201ENST00000517048 105 ntBASIC2□□□□□ -2.09
CCDC144NLQ6NUI1 AC127455.1-201ENST00000565496 145 ntBASIC2□□□□□ -2.09
CCDC144NLQ6NUI1 MIR3671-201ENST00000580455 88 ntBASIC2□□□□□ -2.09
CCDC144NLQ6NUI1 MIR4513-201ENST00000581077 86 ntBASIC2□□□□□ -2.09
CCDC144NLQ6NUI1 GS1-279B7.1-204ENST00000641809 378 ntBASIC2□□□□□ -2.09
CCDC144NLQ6NUI1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 SNORA72-201ENST00000384339 132 ntBASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 RNA5SP100-201ENST00000410903 110 ntBASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 RNA5SP59-201ENST00000410922 110 ntBASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 AC245047.3-201ENST00000429428 127 ntBASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 RPS27P1-201ENST00000450552 247 ntBASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 AC233266.1-201ENST00000454518 96 ntBASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 RPL23AP54-201ENST00000495129 419 ntBASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 RNU4-71P-201ENST00000516258 113 ntBASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 RNA5SP148-201ENST00000516527 94 ntBASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 RNU6-1291P-201ENST00000516591 104 ntBASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 AC011604.1-201ENST00000545978 196 ntBASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 AC242852.1-201ENST00000612151 96 ntBASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 AL442067.1-201ENST00000613261 223 ntBASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 AC244015.1-201ENST00000622301 99 ntBASIC1.99□□□□□ -2.09
CCDC144NLQ6NUI1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 RNU6-1205P-201ENST00000363625 106 ntBASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 Y_RNA.292-201ENST00000364904 97 ntBASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 RNU6-296P-201ENST00000384608 107 ntBASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 Y_RNA.552-201ENST00000384665 112 ntBASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 AL512604.1-201ENST00000404812 257 ntBASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 SNORA36B-201ENST00000410438 131 ntBASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 RNU2-7P-201ENST00000410794 178 ntBASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 AL158823.1-201ENST00000418441 478 ntBASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 RNA5SP57-201ENST00000459463 123 ntBASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 SNORD116-28-201ENST00000516123 91 ntBASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 AC141273.2-201ENST00000618989 130 ntBASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 AC078938.1-201ENST00000620993 318 ntBASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 AC100821.1-201ENST00000523153 2479 ntBASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC144NLQ6NUI1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC144NLQ6NUI1 AL596028.1-201ENST00000326971 197 ntBASIC1.97□□□□□ -2.09
CCDC144NLQ6NUI1 RNU6-144P-201ENST00000383951 107 ntBASIC1.97□□□□□ -2.09
CCDC144NLQ6NUI1 Y_RNA.621-201ENST00000411065 96 ntBASIC1.97□□□□□ -2.09
CCDC144NLQ6NUI1 AL513328.1-201ENST00000446460 224 ntBASIC1.97□□□□□ -2.09
CCDC144NLQ6NUI1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC144NLQ6NUI1 RNA5SP437-201ENST00000517249 129 ntBASIC1.97□□□□□ -2.09
CCDC144NLQ6NUI1 AL358944.1-201ENST00000528537 144 ntBASIC1.97□□□□□ -2.09
CCDC144NLQ6NUI1 MIR1291-201ENST00000627649 87 ntBASIC1.97□□□□□ -2.09
CCDC144NLQ6NUI1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.97□□□□□ -2.09
CCDC144NLQ6NUI1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC144NLQ6NUI1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC144NLQ6NUI1 AC008555.8-201ENST00000623602 2168 ntBASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 AC068700.1-201ENST00000565862 3754 ntBASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 MIR449A-201ENST00000362113 91 ntBASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 RNY1-201ENST00000364228 113 ntBASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 Y_RNA.293-201ENST00000364908 93 ntBASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 RNU6-1080P-201ENST00000383982 107 ntBASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 RNA5SP212-201ENST00000391223 107 ntBASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 RPL23AP63-201ENST00000498752 471 ntBASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 AC234781.5-201ENST00000508429 271 ntBASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 AP002004.2-201ENST00000531656 154 ntBASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 AC021269.2-201ENST00000532318 330 ntBASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 MIR4287-201ENST00000579398 78 ntBASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 AL929325.1-201ENST00000603096 117 ntBASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 AC011921.3-201ENST00000605540 361 ntBASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 MIR8054-201ENST00000620877 86 ntBASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC144NLQ6NUI1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
CCDC144NLQ6NUI1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.95□□□□□ -2.1
CCDC144NLQ6NUI1 SNORA1B-201ENST00000362535 133 ntBASIC1.95□□□□□ -2.1
CCDC144NLQ6NUI1 Y_RNA.304-201ENST00000365011 112 ntBASIC1.95□□□□□ -2.1
CCDC144NLQ6NUI1 RNY4P28-201ENST00000365281 93 ntBASIC1.95□□□□□ -2.1
CCDC144NLQ6NUI1 Y_RNA.515-201ENST00000384535 112 ntBASIC1.95□□□□□ -2.1
CCDC144NLQ6NUI1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CCDC144NLQ6NUI1 RNU6-440P-201ENST00000390882 105 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms