Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RC3H1Q5TC82 AP003122.5-201ENST00000527668 3766 ntBASIC3.98□□□□□ -1.77
RC3H1Q5TC82 RNY3P2-201ENST00000362918 102 ntBASIC3.98□□□□□ -1.77
RC3H1Q5TC82 Y_RNA.290-201ENST00000364879 114 ntBASIC3.98□□□□□ -1.77
RC3H1Q5TC82 Y_RNA.298-201ENST00000364960 107 ntBASIC3.98□□□□□ -1.77
RC3H1Q5TC82 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.98□□□□□ -1.77
RC3H1Q5TC82 SNRPGP13-201ENST00000442212 177 ntBASIC3.98□□□□□ -1.77
RC3H1Q5TC82 RPL39P25-201ENST00000449384 154 ntBASIC3.98□□□□□ -1.77
RC3H1Q5TC82 AP002884.2-201ENST00000471647 395 ntBASIC3.98□□□□□ -1.77
RC3H1Q5TC82 SUMO2P16-201ENST00000519475 264 ntBASIC3.98□□□□□ -1.77
RC3H1Q5TC82 AC068657.1-201ENST00000520807 306 ntBASIC3.98□□□□□ -1.77
RC3H1Q5TC82 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.98□□□□□ -1.77
RC3H1Q5TC82 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RC3H1Q5TC82 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.98□□□□□ -1.77
RC3H1Q5TC82 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RC3H1Q5TC82 RNU6-349P-201ENST00000362402 107 ntBASIC3.97□□□□□ -1.77
RC3H1Q5TC82 RNU6-1276P-201ENST00000365372 104 ntBASIC3.97□□□□□ -1.77
RC3H1Q5TC82 RNU6-1296P-201ENST00000383879 107 ntBASIC3.97□□□□□ -1.77
RC3H1Q5TC82 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.97□□□□□ -1.77
RC3H1Q5TC82 RNU6-1096P-201ENST00000517089 102 ntBASIC3.97□□□□□ -1.77
RC3H1Q5TC82 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.97□□□□□ -1.77
RC3H1Q5TC82 AC021443.1-201ENST00000604478 211 ntBASIC3.97□□□□□ -1.77
RC3H1Q5TC82 uc_338.14-201ENST00000613162 166 ntBASIC3.97□□□□□ -1.77
RC3H1Q5TC82 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.97□□□□□ -1.77
RC3H1Q5TC82 AC244205.2-202ENST00000635781 342 ntBASIC3.97□□□□□ -1.77
RC3H1Q5TC82 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RC3H1Q5TC82 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.97□□□□□ -1.77
RC3H1Q5TC82 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RC3H1Q5TC82 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.97□□□□□ -1.77
RC3H1Q5TC82 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
RC3H1Q5TC82 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RC3H1Q5TC82 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.96□□□□□ -1.78
RC3H1Q5TC82 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RC3H1Q5TC82 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RC3H1Q5TC82 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RC3H1Q5TC82 RNU6-242P-201ENST00000384359 107 ntBASIC3.96□□□□□ -1.78
RC3H1Q5TC82 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RC3H1Q5TC82 SNORA48.8-201ENST00000391324 134 ntBASIC3.96□□□□□ -1.78
RC3H1Q5TC82 Y_RNA.621-201ENST00000411065 96 ntBASIC3.96□□□□□ -1.78
RC3H1Q5TC82 AL135938.1-201ENST00000443141 297 ntBASIC3.96□□□□□ -1.78
RC3H1Q5TC82 HMGN1P7-201ENST00000491722 313 ntBASIC3.96□□□□□ -1.78
RC3H1Q5TC82 RNU2-13P-201ENST00000515909 113 ntBASIC3.96□□□□□ -1.78
RC3H1Q5TC82 AC008507.4-201ENST00000585464 127 ntBASIC3.96□□□□□ -1.78
RC3H1Q5TC82 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.96□□□□□ -1.78
RC3H1Q5TC82 AC090517.3-201ENST00000625170 141 ntBASIC3.96□□□□□ -1.78
RC3H1Q5TC82 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RC3H1Q5TC82 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RC3H1Q5TC82 ZNF720P1-201ENST00000562403 1939 ntBASIC3.95□□□□□ -1.78
RC3H1Q5TC82 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RC3H1Q5TC82 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RC3H1Q5TC82 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.95□□□□□ -1.78
RC3H1Q5TC82 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RC3H1Q5TC82 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RC3H1Q5TC82 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
RC3H1Q5TC82 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.95□□□□□ -1.78
RC3H1Q5TC82 MIR22-201ENST00000362190 85 ntBASIC3.95□□□□□ -1.78
RC3H1Q5TC82 RNU6-497P-201ENST00000365316 104 ntBASIC3.95□□□□□ -1.78
RC3H1Q5TC82 MIR518F-201ENST00000384973 87 ntBASIC3.95□□□□□ -1.78
RC3H1Q5TC82 MIR1912-201ENST00000410389 80 ntBASIC3.95□□□□□ -1.78
RC3H1Q5TC82 AC097463.2-201ENST00000421074 142 ntBASIC3.95□□□□□ -1.78
RC3H1Q5TC82 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.95□□□□□ -1.78
RC3H1Q5TC82 RNA5SP490-201ENST00000517141 136 ntBASIC3.95□□□□□ -1.78
RC3H1Q5TC82 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.95□□□□□ -1.78
RC3H1Q5TC82 MIR3163-201ENST00000581592 73 ntBASIC3.95□□□□□ -1.78
RC3H1Q5TC82 AC007229.1-201ENST00000590455 412 ntBASIC3.95□□□□□ -1.78
RC3H1Q5TC82 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
RC3H1Q5TC82 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RC3H1Q5TC82 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RC3H1Q5TC82 RNU6-198P-201ENST00000384258 104 ntBASIC3.94□□□□□ -1.78
RC3H1Q5TC82 RNU6-1104P-201ENST00000384723 104 ntBASIC3.94□□□□□ -1.78
RC3H1Q5TC82 MIR520G-201ENST00000385064 90 ntBASIC3.94□□□□□ -1.78
RC3H1Q5TC82 U8.17-201ENST00000391292 132 ntBASIC3.94□□□□□ -1.78
RC3H1Q5TC82 Y_RNA.601-201ENST00000410500 113 ntBASIC3.94□□□□□ -1.78
RC3H1Q5TC82 SNRPGP10-201ENST00000432323 225 ntBASIC3.94□□□□□ -1.78
RC3H1Q5TC82 CST9LP2-201ENST00000437612 320 ntBASIC3.94□□□□□ -1.78
RC3H1Q5TC82 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.94□□□□□ -1.78
RC3H1Q5TC82 RNA5SP57-201ENST00000459463 123 ntBASIC3.94□□□□□ -1.78
RC3H1Q5TC82 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.94□□□□□ -1.78
RC3H1Q5TC82 AC004486.1-201ENST00000546846 233 ntBASIC3.94□□□□□ -1.78
RC3H1Q5TC82 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.94□□□□□ -1.78
RC3H1Q5TC82 MIR6076-201ENST00000617521 113 ntBASIC3.94□□□□□ -1.78
RC3H1Q5TC82 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
RC3H1Q5TC82 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.94□□□□□ -1.78
RC3H1Q5TC82 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RC3H1Q5TC82 AC080128.1-201ENST00000474389 1917 ntBASIC3.93□□□□□ -1.78
RC3H1Q5TC82 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RC3H1Q5TC82 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.93□□□□□ -1.78
RC3H1Q5TC82 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.93□□□□□ -1.78
RC3H1Q5TC82 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RC3H1Q5TC82 SNORA4.2-201ENST00000365313 147 ntBASIC3.93□□□□□ -1.78
RC3H1Q5TC82 SNORA2.2-201ENST00000365473 135 ntBASIC3.93□□□□□ -1.78
RC3H1Q5TC82 RNU6-816P-201ENST00000390914 107 ntBASIC3.93□□□□□ -1.78
RC3H1Q5TC82 RNU6-1268P-201ENST00000391214 107 ntBASIC3.93□□□□□ -1.78
RC3H1Q5TC82 RNU6-279P-201ENST00000391297 101 ntBASIC3.93□□□□□ -1.78
RC3H1Q5TC82 RNU6-1239P-201ENST00000391310 107 ntBASIC3.93□□□□□ -1.78
RC3H1Q5TC82 AC010099.1-201ENST00000455434 375 ntBASIC3.93□□□□□ -1.78
RC3H1Q5TC82 RNU7-164P-201ENST00000459221 62 ntBASIC3.93□□□□□ -1.78
RC3H1Q5TC82 RN7SKP132-201ENST00000516001 208 ntBASIC3.93□□□□□ -1.78
RC3H1Q5TC82 RNU2-34P-201ENST00000516534 121 ntBASIC3.93□□□□□ -1.78
RC3H1Q5TC82 AC022254.1-201ENST00000567857 235 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms