Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 MIR4713-201ENST00000582691 75 ntBASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 AC012493.3-201ENST00000604494 112 ntBASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 SNORA25.1-201ENST00000362326 128 ntBASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 RNU6-439P-201ENST00000384188 106 ntBASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 HSPE1P21-201ENST00000438283 308 ntBASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 RPS4XP11-201ENST00000446897 772 ntBASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 RNA5SP233-201ENST00000459153 113 ntBASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 AC091959.1-201ENST00000495857 238 ntBASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 RNU6-1291P-201ENST00000516591 104 ntBASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 SCARNA24.2-201ENST00000516968 130 ntBASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 RNU6-341P-201ENST00000516973 96 ntBASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 RNU6-1096P-201ENST00000517089 102 ntBASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 AL627230.6-201ENST00000611129 280 ntBASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.88□□□□□ -2.11
RUNDC3AQ59EK9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
RUNDC3AQ59EK9 U8.2-201ENST00000363156 134 ntBASIC1.87□□□□□ -2.11
RUNDC3AQ59EK9 RNU6-801P-201ENST00000364087 105 ntBASIC1.87□□□□□ -2.11
RUNDC3AQ59EK9 MIR520G-201ENST00000385064 90 ntBASIC1.87□□□□□ -2.11
RUNDC3AQ59EK9 SNORA12.1-201ENST00000390873 148 ntBASIC1.87□□□□□ -2.11
RUNDC3AQ59EK9 AL023284.1-201ENST00000403956 276 ntBASIC1.87□□□□□ -2.11
RUNDC3AQ59EK9 SNORA11.2-201ENST00000408318 127 ntBASIC1.87□□□□□ -2.11
RUNDC3AQ59EK9 RNA5SP489-201ENST00000410986 109 ntBASIC1.87□□□□□ -2.11
RUNDC3AQ59EK9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.87□□□□□ -2.11
RUNDC3AQ59EK9 RNA5SP481-201ENST00000516814 122 ntBASIC1.87□□□□□ -2.11
RUNDC3AQ59EK9 AC037487.3-201ENST00000606668 112 ntBASIC1.87□□□□□ -2.11
RUNDC3AQ59EK9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.87□□□□□ -2.11
RUNDC3AQ59EK9 Y_RNA.783-201ENST00000613546 102 ntBASIC1.87□□□□□ -2.11
RUNDC3AQ59EK9 MIR8054-201ENST00000620877 86 ntBASIC1.87□□□□□ -2.11
RUNDC3AQ59EK9 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.87□□□□□ -2.11
RUNDC3AQ59EK9 RNU6-1048P-201ENST00000364054 107 ntBASIC1.86□□□□□ -2.11
RUNDC3AQ59EK9 Y_RNA.267-201ENST00000364679 109 ntBASIC1.86□□□□□ -2.11
RUNDC3AQ59EK9 RNU6-514P-201ENST00000384208 107 ntBASIC1.86□□□□□ -2.11
RUNDC3AQ59EK9 SNORA67.3-201ENST00000384366 140 ntBASIC1.86□□□□□ -2.11
RUNDC3AQ59EK9 RNU6-1248P-201ENST00000391096 64 ntBASIC1.86□□□□□ -2.11
RUNDC3AQ59EK9 SNORA26.5-201ENST00000391215 123 ntBASIC1.86□□□□□ -2.11
RUNDC3AQ59EK9 RNU11-5P-201ENST00000391216 129 ntBASIC1.86□□□□□ -2.11
RUNDC3AQ59EK9 RNU2-14P-201ENST00000411053 191 ntBASIC1.86□□□□□ -2.11
RUNDC3AQ59EK9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.86□□□□□ -2.11
RUNDC3AQ59EK9 MTND4LP30-201ENST00000454092 297 ntBASIC1.86□□□□□ -2.11
RUNDC3AQ59EK9 AC136628.3-201ENST00000521868 290 ntBASIC1.86□□□□□ -2.11
RUNDC3AQ59EK9 AL929325.1-201ENST00000603096 117 ntBASIC1.86□□□□□ -2.11
RUNDC3AQ59EK9 AC005972.2-201ENST00000604690 348 ntBASIC1.86□□□□□ -2.11
RUNDC3AQ59EK9 AC103810.8-201ENST00000607347 118 ntBASIC1.86□□□□□ -2.11
RUNDC3AQ59EK9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.86□□□□□ -2.11
RUNDC3AQ59EK9 AC068647.2-201ENST00000637380 353 ntBASIC1.86□□□□□ -2.11
RUNDC3AQ59EK9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
RUNDC3AQ59EK9 AL391987.6-201ENST00000305671 199 ntBASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 SNORA1B-201ENST00000362535 133 ntBASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 RNU4-13P-201ENST00000364019 141 ntBASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 SNORA72.4-201ENST00000384174 132 ntBASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 RNU6-574P-201ENST00000384265 107 ntBASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 MIR676-201ENST00000390702 67 ntBASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 MIR1302-3-201ENST00000408128 138 ntBASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 AC104332.1-201ENST00000440471 797 ntBASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 snoU13.27-201ENST00000459278 104 ntBASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 Y_RNA.668-201ENST00000516233 93 ntBASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 MIR3122-201ENST00000577243 73 ntBASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 MIR4503-201ENST00000582187 83 ntBASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 AL096840.1-201ENST00000603287 93 ntBASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 SNRPGP19-201ENST00000603826 189 ntBASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 U6.104-201ENST00000637979 90 ntBASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 AC100821.1-201ENST00000523153 2479 ntBASIC1.85□□□□□ -2.11
RUNDC3AQ59EK9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
RUNDC3AQ59EK9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
RUNDC3AQ59EK9 MIR335-201ENST00000362173 94 ntBASIC1.84□□□□□ -2.11
RUNDC3AQ59EK9 Y_RNA.144-201ENST00000363521 113 ntBASIC1.84□□□□□ -2.11
RUNDC3AQ59EK9 RNU6-1323P-201ENST00000384025 107 ntBASIC1.84□□□□□ -2.11
RUNDC3AQ59EK9 RNU6-662P-201ENST00000384253 104 ntBASIC1.84□□□□□ -2.11
RUNDC3AQ59EK9 RNU6-196P-201ENST00000384315 107 ntBASIC1.84□□□□□ -2.11
RUNDC3AQ59EK9 RNU6-440P-201ENST00000390882 105 ntBASIC1.84□□□□□ -2.11
RUNDC3AQ59EK9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.84□□□□□ -2.11
RUNDC3AQ59EK9 RNA5SP425-201ENST00000410336 112 ntBASIC1.84□□□□□ -2.11
RUNDC3AQ59EK9 RNU2-38P-201ENST00000410856 79 ntBASIC1.84□□□□□ -2.11
RUNDC3AQ59EK9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RUNDC3AQ59EK9 RPL23AP42-201ENST00000471152 471 ntBASIC1.84□□□□□ -2.11
RUNDC3AQ59EK9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.84□□□□□ -2.11
RUNDC3AQ59EK9 AL512605.2-201ENST00000592972 256 ntBASIC1.84□□□□□ -2.11
RUNDC3AQ59EK9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.84□□□□□ -2.11
RUNDC3AQ59EK9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
RUNDC3AQ59EK9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 UBE2WP1-201ENST00000362030 340 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 RNU6-661P-201ENST00000362409 107 ntBASIC1.83□□□□□ -2.12
RUNDC3AQ59EK9 RNU6-1272P-201ENST00000362776 107 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms