Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 RNU6-271P-201ENST00000363858 105 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 RNY1-201ENST00000364228 113 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 RNU6-407P-201ENST00000365280 104 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.590-201ENST00000410140 107 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 RNA5SP338-201ENST00000410495 85 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 RNU2-40P-201ENST00000410833 196 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.4□□□□□ -2.03
LONRF3Q496Y0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 AC009779.6-201ENST00000603972 165 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.4□□□□□ -2.03
LONRF3Q496Y0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 U2.15-201ENST00000611544 191 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 U2.16-201ENST00000613119 191 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 U2.12-201ENST00000613778 191 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 U2.20-201ENST00000613956 192 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 U2.9-201ENST00000615427 191 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 U2.11-201ENST00000616345 191 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 U2.2-201ENST00000616535 191 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 U2.3-201ENST00000617785 191 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 U2.19-201ENST00000618602 191 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 RNU2-1-201ENST00000618664 191 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 U2.6-201ENST00000619225 191 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 U2.5-201ENST00000619465 191 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 U2.10-201ENST00000620268 191 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.4□□□□□ -2.03
LONRF3Q496Y0 AP000553.5-201ENST00000641933 54 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.4□□□□□ -2.03
LONRF3Q496Y0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
LONRF3Q496Y0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.39□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.82-201ENST00000363000 102 ntBASIC2.39□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.92-201ENST00000363043 102 ntBASIC2.39□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.235-201ENST00000364412 102 ntBASIC2.39□□□□□ -2.03
LONRF3Q496Y0 RNA5SP160-201ENST00000364866 120 ntBASIC2.39□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.306-201ENST00000365015 102 ntBASIC2.39□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.312-201ENST00000365089 102 ntBASIC2.39□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.322-201ENST00000365151 102 ntBASIC2.39□□□□□ -2.03
LONRF3Q496Y0 MIR764-201ENST00000390811 85 ntBASIC2.39□□□□□ -2.03
LONRF3Q496Y0 RNU6-855P-201ENST00000410395 104 ntBASIC2.39□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.650-201ENST00000459002 102 ntBASIC2.39□□□□□ -2.03
LONRF3Q496Y0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.39□□□□□ -2.03
LONRF3Q496Y0 RNA5SP20-201ENST00000515976 84 ntBASIC2.39□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.679-201ENST00000516416 91 ntBASIC2.39□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.777-201ENST00000516982 102 ntBASIC2.39□□□□□ -2.03
LONRF3Q496Y0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.39□□□□□ -2.03
LONRF3Q496Y0 MIR4282-201ENST00000583613 67 ntBASIC2.39□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.771-201ENST00000598668 102 ntBASIC2.39□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.789-201ENST00000622480 102 ntBASIC2.39□□□□□ -2.03
LONRF3Q496Y0 AC006435.5-201ENST00000624486 112 ntBASIC2.39□□□□□ -2.03
LONRF3Q496Y0 snoU18.1-201ENST00000629629 71 ntBASIC2.39□□□□□ -2.03
LONRF3Q496Y0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
LONRF3Q496Y0 RNU6-1272P-201ENST00000362776 107 ntBASIC2.38□□□□□ -2.03
LONRF3Q496Y0 RNU6-801P-201ENST00000364087 105 ntBASIC2.38□□□□□ -2.03
LONRF3Q496Y0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.38□□□□□ -2.03
LONRF3Q496Y0 SNORD2.1-201ENST00000458762 69 ntBASIC2.38□□□□□ -2.03
LONRF3Q496Y0 RNU6-717P-201ENST00000459076 104 ntBASIC2.38□□□□□ -2.03
LONRF3Q496Y0 RPS26P55-201ENST00000471178 356 ntBASIC2.38□□□□□ -2.03
LONRF3Q496Y0 UBL5P3-201ENST00000475112 231 ntBASIC2.38□□□□□ -2.03
LONRF3Q496Y0 AC011406.1-201ENST00000512440 370 ntBASIC2.38□□□□□ -2.03
LONRF3Q496Y0 SNORD116-28-201ENST00000516123 91 ntBASIC2.38□□□□□ -2.03
LONRF3Q496Y0 AC136628.3-201ENST00000521868 290 ntBASIC2.38□□□□□ -2.03
LONRF3Q496Y0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.38□□□□□ -2.03
LONRF3Q496Y0 AC002984.1-201ENST00000591692 448 ntBASIC2.38□□□□□ -2.03
LONRF3Q496Y0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.38□□□□□ -2.03
LONRF3Q496Y0 MIR6132-201ENST00000622083 109 ntBASIC2.38□□□□□ -2.03
LONRF3Q496Y0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
LONRF3Q496Y0 SNORD114-1-201ENST00000362705 72 ntBASIC2.37□□□□□ -2.03
LONRF3Q496Y0 RNU6-862P-201ENST00000362804 105 ntBASIC2.37□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.172-201ENST00000363765 102 ntBASIC2.37□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.341-201ENST00000365341 102 ntBASIC2.37□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.368-201ENST00000365547 113 ntBASIC2.37□□□□□ -2.03
LONRF3Q496Y0 RNU6-763P-201ENST00000390865 106 ntBASIC2.37□□□□□ -2.03
LONRF3Q496Y0 MIR1253-201ENST00000408273 105 ntBASIC2.37□□□□□ -2.03
LONRF3Q496Y0 AL139156.1-201ENST00000412785 841 ntBASIC2.37□□□□□ -2.03
LONRF3Q496Y0 AL021397.1-201ENST00000451806 248 ntBASIC2.37□□□□□ -2.03
LONRF3Q496Y0 RPS27P22-201ENST00000478056 241 ntBASIC2.37□□□□□ -2.03
LONRF3Q496Y0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.37□□□□□ -2.03
LONRF3Q496Y0 RNU6-1337P-201ENST00000516525 95 ntBASIC2.37□□□□□ -2.03
LONRF3Q496Y0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.37□□□□□ -2.03
LONRF3Q496Y0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.37□□□□□ -2.03
LONRF3Q496Y0 AC130289.1-201ENST00000577321 73 ntBASIC2.37□□□□□ -2.03
LONRF3Q496Y0 MIR4524B-201ENST00000581569 115 ntBASIC2.37□□□□□ -2.03
LONRF3Q496Y0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.37□□□□□ -2.03
LONRF3Q496Y0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.292-201ENST00000364904 97 ntBASIC2.36□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.310-201ENST00000365063 113 ntBASIC2.36□□□□□ -2.03
LONRF3Q496Y0 RNA5SP37-201ENST00000365420 130 ntBASIC2.36□□□□□ -2.03
LONRF3Q496Y0 RNU6-211P-201ENST00000384047 107 ntBASIC2.36□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.456-201ENST00000384232 111 ntBASIC2.36□□□□□ -2.03
LONRF3Q496Y0 BTF3P11-201ENST00000426582 477 ntBASIC2.36□□□□□ -2.03
LONRF3Q496Y0 AL591806.2-201ENST00000433122 173 ntBASIC2.36□□□□□ -2.03
LONRF3Q496Y0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.36□□□□□ -2.03
LONRF3Q496Y0 HMGN2P34-201ENST00000437647 269 ntBASIC2.36□□□□□ -2.03
LONRF3Q496Y0 HSPE1P13-201ENST00000451143 297 ntBASIC2.36□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.638-201ENST00000459374 113 ntBASIC2.36□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.637-201ENST00000459424 114 ntBASIC2.36□□□□□ -2.03
LONRF3Q496Y0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.36□□□□□ -2.03
LONRF3Q496Y0 AC010409.1-201ENST00000487382 476 ntBASIC2.36□□□□□ -2.03
LONRF3Q496Y0 AC022254.1-201ENST00000567857 235 ntBASIC2.36□□□□□ -2.03
LONRF3Q496Y0 AL008718.3-201ENST00000610217 321 ntBASIC2.36□□□□□ -2.03
LONRF3Q496Y0 AL442067.1-201ENST00000613261 223 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 237.3 ms