Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RNA5SP100-201ENST00000410903 110 ntBASIC2.65□□□□□ -1.99
CCDC144BQ3MJ40 RNA5SP59-201ENST00000410922 110 ntBASIC2.65□□□□□ -1.99
CCDC144BQ3MJ40 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.65□□□□□ -1.99
CCDC144BQ3MJ40 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.65□□□□□ -1.99
CCDC144BQ3MJ40 AL358944.1-201ENST00000528537 144 ntBASIC2.65□□□□□ -1.99
CCDC144BQ3MJ40 AC121758.2-201ENST00000553271 193 ntBASIC2.65□□□□□ -1.99
CCDC144BQ3MJ40 AC012433.1-201ENST00000588916 398 ntBASIC2.65□□□□□ -1.99
CCDC144BQ3MJ40 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC144BQ3MJ40 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.65□□□□□ -1.99
CCDC144BQ3MJ40 AL773524.1-201ENST00000614065 229 ntBASIC2.65□□□□□ -1.99
CCDC144BQ3MJ40 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.65□□□□□ -1.99
CCDC144BQ3MJ40 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC144BQ3MJ40 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC144BQ3MJ40 Y_RNA.275-201ENST00000364726 110 ntBASIC2.64□□□□□ -1.99
CCDC144BQ3MJ40 RNU6-136P-201ENST00000384663 107 ntBASIC2.64□□□□□ -1.99
CCDC144BQ3MJ40 MIR17-201ENST00000385012 84 ntBASIC2.64□□□□□ -1.99
CCDC144BQ3MJ40 RPL23AP6-201ENST00000446637 472 ntBASIC2.64□□□□□ -1.99
CCDC144BQ3MJ40 snoU13.23-201ENST00000458863 104 ntBASIC2.64□□□□□ -1.99
CCDC144BQ3MJ40 IGLV3-17-201ENST00000519099 244 ntBASIC2.64□□□□□ -1.99
CCDC144BQ3MJ40 AC091178.2-201ENST00000584401 117 ntBASIC2.64□□□□□ -1.99
CCDC144BQ3MJ40 AC067747.1-201ENST00000608026 250 ntBASIC2.64□□□□□ -1.99
CCDC144BQ3MJ40 AC068647.2-201ENST00000637380 353 ntBASIC2.64□□□□□ -1.99
CCDC144BQ3MJ40 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC144BQ3MJ40 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC144BQ3MJ40 SNORA72.4-201ENST00000384174 132 ntBASIC2.63□□□□□ -1.99
CCDC144BQ3MJ40 MIR764-201ENST00000390811 85 ntBASIC2.63□□□□□ -1.99
CCDC144BQ3MJ40 AC009310.1-201ENST00000414414 451 ntBASIC2.63□□□□□ -1.99
CCDC144BQ3MJ40 AC244636.1-201ENST00000421152 228 ntBASIC2.63□□□□□ -1.99
CCDC144BQ3MJ40 RNU6-1096P-201ENST00000517089 102 ntBASIC2.63□□□□□ -1.99
CCDC144BQ3MJ40 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC144BQ3MJ40 AC010900.2-201ENST00000604508 210 ntBASIC2.63□□□□□ -1.99
CCDC144BQ3MJ40 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC144BQ3MJ40 MIR6873-201ENST00000622788 63 ntBASIC2.63□□□□□ -1.99
CCDC144BQ3MJ40 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC144BQ3MJ40 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC144BQ3MJ40 SNORD114-1-201ENST00000362705 72 ntBASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 Y_RNA.172-201ENST00000363765 102 ntBASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 RNU6-899P-201ENST00000363947 107 ntBASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 RNU6-801P-201ENST00000364087 105 ntBASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 Y_RNA.217-201ENST00000364214 105 ntBASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 Y_RNA.416-201ENST00000384014 113 ntBASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 SNORA72-201ENST00000384339 132 ntBASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 RNU6-296P-201ENST00000384608 107 ntBASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 AC245047.3-201ENST00000429428 127 ntBASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 AL591806.2-201ENST00000433122 173 ntBASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 Y_RNA.641-201ENST00000459414 105 ntBASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 AC091021.1-201ENST00000468051 388 ntBASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 AP002004.2-201ENST00000531656 154 ntBASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 MIR5007-201ENST00000583098 95 ntBASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 AL162424.1-201ENST00000602325 221 ntBASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 AP003357.1-201ENST00000604497 148 ntBASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 BX284668.6-201ENST00000606899 438 ntBASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC144BQ3MJ40 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
CCDC144BQ3MJ40 RNU6-1272P-201ENST00000362776 107 ntBASIC2.61□□□□□ -1.99
CCDC144BQ3MJ40 FTH1P12-201ENST00000432137 551 ntBASIC2.61□□□□□ -1.99
CCDC144BQ3MJ40 AC015712.3-201ENST00000559380 164 ntBASIC2.61□□□□□ -1.99
CCDC144BQ3MJ40 POLR3GP1-201ENST00000594073 261 ntBASIC2.61□□□□□ -1.99
CCDC144BQ3MJ40 AC022217.4-201ENST00000604389 163 ntBASIC2.61□□□□□ -1.99
CCDC144BQ3MJ40 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC144BQ3MJ40 RNU6-662P-201ENST00000384253 104 ntBASIC2.6□□□□□ -1.99
CCDC144BQ3MJ40 RN7SKP200-201ENST00000410564 320 ntBASIC2.6□□□□□ -1.99
CCDC144BQ3MJ40 AL135790.2-201ENST00000437701 267 ntBASIC2.6□□□□□ -1.99
CCDC144BQ3MJ40 AC104332.1-201ENST00000440471 797 ntBASIC2.6□□□□□ -1.99
CCDC144BQ3MJ40 RPS4XP11-201ENST00000446897 772 ntBASIC2.6□□□□□ -1.99
CCDC144BQ3MJ40 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC144BQ3MJ40 RNA5SP233-201ENST00000459153 113 ntBASIC2.6□□□□□ -1.99
CCDC144BQ3MJ40 AC104435.1-201ENST00000483483 166 ntBASIC2.6□□□□□ -1.99
CCDC144BQ3MJ40 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC144BQ3MJ40 RNU7-115P-201ENST00000516433 55 ntBASIC2.6□□□□□ -1.99
CCDC144BQ3MJ40 RNU7-28P-201ENST00000516759 62 ntBASIC2.6□□□□□ -1.99
CCDC144BQ3MJ40 DEFB122-202ENST00000569013 197 ntBASIC2.6□□□□□ -1.99
CCDC144BQ3MJ40 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.6□□□□□ -1.99
CCDC144BQ3MJ40 MIR6840-201ENST00000611937 71 ntBASIC2.6□□□□□ -1.99
CCDC144BQ3MJ40 MIR548AY-201ENST00000617669 107 ntBASIC2.6□□□□□ -1.99
CCDC144BQ3MJ40 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CCDC144BQ3MJ40 AC100821.1-201ENST00000523153 2479 ntBASIC2.6□□□□□ -1.99
CCDC144BQ3MJ40 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -1.99
CCDC144BQ3MJ40 Y_RNA.267-201ENST00000364679 109 ntBASIC2.59□□□□□ -1.99
CCDC144BQ3MJ40 RNU6-144P-201ENST00000383951 107 ntBASIC2.59□□□□□ -1.99
CCDC144BQ3MJ40 RNU6-1289P-201ENST00000384431 106 ntBASIC2.59□□□□□ -1.99
CCDC144BQ3MJ40 RNU6-763P-201ENST00000390865 106 ntBASIC2.59□□□□□ -1.99
CCDC144BQ3MJ40 RNU6-360P-201ENST00000390944 104 ntBASIC2.59□□□□□ -1.99
CCDC144BQ3MJ40 RNA5SP109-201ENST00000391010 116 ntBASIC2.59□□□□□ -1.99
CCDC144BQ3MJ40 AL603910.2-201ENST00000407268 136 ntBASIC2.59□□□□□ -1.99
CCDC144BQ3MJ40 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC144BQ3MJ40 RPS27P1-201ENST00000450552 247 ntBASIC2.59□□□□□ -1.99
CCDC144BQ3MJ40 RPL23AP63-201ENST00000498752 471 ntBASIC2.59□□□□□ -1.99
CCDC144BQ3MJ40 RNU2-56P-201ENST00000516826 190 ntBASIC2.59□□□□□ -1.99
CCDC144BQ3MJ40 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC144BQ3MJ40 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC144BQ3MJ40 SNORA28-201ENST00000606769 126 ntBASIC2.59□□□□□ -1.99
CCDC144BQ3MJ40 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC144BQ3MJ40 Y_RNA.82-201ENST00000363000 102 ntBASIC2.58□□□□□ -2
CCDC144BQ3MJ40 Y_RNA.92-201ENST00000363043 102 ntBASIC2.58□□□□□ -2
CCDC144BQ3MJ40 Y_RNA.235-201ENST00000364412 102 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms