Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 Y_RNA.777-201ENST00000516982 102 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 MIR4648-201ENST00000580107 72 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.771-201ENST00000598668 102 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.789-201ENST00000622480 102 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 RNU6-160P-201ENST00000384591 107 ntBASIC1.64□□□□□ -2.15
SNAI3Q3KNW1 AC024067.1-201ENST00000426199 223 ntBASIC1.64□□□□□ -2.15
SNAI3Q3KNW1 AL121890.1-201ENST00000435457 205 ntBASIC1.64□□□□□ -2.15
SNAI3Q3KNW1 SNORD2.1-201ENST00000458762 69 ntBASIC1.64□□□□□ -2.15
SNAI3Q3KNW1 TRBV12-1-201ENST00000479785 344 ntBASIC1.64□□□□□ -2.15
SNAI3Q3KNW1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.64□□□□□ -2.15
SNAI3Q3KNW1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.64□□□□□ -2.15
SNAI3Q3KNW1 AC011921.3-201ENST00000605540 361 ntBASIC1.64□□□□□ -2.15
SNAI3Q3KNW1 AC013412.1-201ENST00000610687 192 ntBASIC1.64□□□□□ -2.15
SNAI3Q3KNW1 U1.36-201ENST00000620684 176 ntBASIC1.64□□□□□ -2.15
SNAI3Q3KNW1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.64□□□□□ -2.15
SNAI3Q3KNW1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 SNORA27.1-201ENST00000362604 124 ntBASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.124-201ENST00000363339 93 ntBASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 RNU6-200P-201ENST00000364743 107 ntBASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 RNU6-1240P-201ENST00000365155 104 ntBASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 RNY4P28-201ENST00000365281 93 ntBASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 MIR873-201ENST00000401120 77 ntBASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 RNU6-710P-201ENST00000410424 105 ntBASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 AC008134.1-201ENST00000420943 193 ntBASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 AL135790.2-201ENST00000437701 267 ntBASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.637-201ENST00000459424 114 ntBASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 RPS29P21-201ENST00000496272 170 ntBASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 SNORA70.12-201ENST00000516084 153 ntBASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 RNU6-856P-201ENST00000516959 98 ntBASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 AC130289.1-201ENST00000577321 73 ntBASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 snoU18.1-201ENST00000629629 71 ntBASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SNAI3Q3KNW1 RNU6-1272P-201ENST00000362776 107 ntBASIC1.62□□□□□ -2.15
SNAI3Q3KNW1 RNU6-801P-201ENST00000364087 105 ntBASIC1.62□□□□□ -2.15
SNAI3Q3KNW1 RNA5SP493-201ENST00000364115 91 ntBASIC1.62□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.292-201ENST00000364904 97 ntBASIC1.62□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.368-201ENST00000365547 113 ntBASIC1.62□□□□□ -2.15
SNAI3Q3KNW1 SUMO2P12-201ENST00000405924 140 ntBASIC1.62□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.590-201ENST00000410140 107 ntBASIC1.62□□□□□ -2.15
SNAI3Q3KNW1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.62□□□□□ -2.15
SNAI3Q3KNW1 AC003989.2-201ENST00000440224 169 ntBASIC1.62□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.638-201ENST00000459374 113 ntBASIC1.62□□□□□ -2.15
SNAI3Q3KNW1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.62□□□□□ -2.15
SNAI3Q3KNW1 RNU6-138P-201ENST00000515952 107 ntBASIC1.62□□□□□ -2.15
SNAI3Q3KNW1 SNORD116-28-201ENST00000516123 91 ntBASIC1.62□□□□□ -2.15
SNAI3Q3KNW1 AC136628.3-201ENST00000521868 290 ntBASIC1.62□□□□□ -2.15
SNAI3Q3KNW1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.62□□□□□ -2.15
SNAI3Q3KNW1 AL442067.1-201ENST00000613261 223 ntBASIC1.62□□□□□ -2.15
SNAI3Q3KNW1 AC006435.5-201ENST00000624486 112 ntBASIC1.62□□□□□ -2.15
SNAI3Q3KNW1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.172-201ENST00000363765 102 ntBASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.200-201ENST00000364018 102 ntBASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 SNORD114-6-201ENST00000364393 72 ntBASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.310-201ENST00000365063 113 ntBASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 RNA5SP126-201ENST00000365092 109 ntBASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.456-201ENST00000384232 111 ntBASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 MIR1298-201ENST00000408783 112 ntBASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 RNA5SP489-201ENST00000410986 109 ntBASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 AC060773.1-201ENST00000421698 310 ntBASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 HSPE1P13-201ENST00000451143 297 ntBASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 RNU1-131P-201ENST00000458943 161 ntBASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 COX6CP14-201ENST00000469580 174 ntBASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 SUMO2P18-201ENST00000518873 252 ntBASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 MIR3122-201ENST00000577243 73 ntBASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 MIR4713-201ENST00000582691 75 ntBASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 AL078604.3-201ENST00000615580 211 ntBASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 ZNF355P-201ENST00000427301 3216 ntBASIC1.61□□□□□ -2.15
SNAI3Q3KNW1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 AC092881.1-201ENST00000638218 2733 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 RNU6-271P-201ENST00000363858 105 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.199-201ENST00000364014 102 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 SNORA16.1-201ENST00000364597 132 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.274-201ENST00000364714 101 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.341-201ENST00000365341 102 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 RNU6-211P-201ENST00000384047 107 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 SNORA70B-201ENST00000384210 135 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 MT-TR-201ENST00000387439 65 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 RNU6-763P-201ENST00000390865 106 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.626-201ENST00000411288 95 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 RNU2-64P-201ENST00000411315 191 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 U8.19-201ENST00000459095 133 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 RPS26P55-201ENST00000471178 356 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 RNA5SP20-201ENST00000515976 84 ntBASIC1.6□□□□□ -2.15
SNAI3Q3KNW1 RNVU1-2-201ENST00000516326 135 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms