Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AC091021.1-201ENST00000468051 388 ntBASIC3.16□□□□□ -1.9
CCDC27Q2M243 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC27Q2M243 RNU6-826P-201ENST00000516827 104 ntBASIC3.16□□□□□ -1.9
CCDC27Q2M243 U1.36-201ENST00000620684 176 ntBASIC3.16□□□□□ -1.9
CCDC27Q2M243 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC27Q2M243 SNORA48.1-201ENST00000390879 135 ntBASIC3.15□□□□□ -1.91
CCDC27Q2M243 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC27Q2M243 AL513328.1-201ENST00000446460 224 ntBASIC3.15□□□□□ -1.91
CCDC27Q2M243 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC27Q2M243 Y_RNA.802-201ENST00000614892 130 ntBASIC3.15□□□□□ -1.91
CCDC27Q2M243 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC27Q2M243 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC27Q2M243 AC080100.1-201ENST00000624239 5356 ntBASIC3.14□□□□□ -1.91
CCDC27Q2M243 MIR21-201ENST00000362134 72 ntBASIC3.14□□□□□ -1.91
CCDC27Q2M243 MIR367-201ENST00000362299 68 ntBASIC3.14□□□□□ -1.91
CCDC27Q2M243 Y_RNA.308-201ENST00000365043 101 ntBASIC3.14□□□□□ -1.91
CCDC27Q2M243 DEFA7P-201ENST00000382676 285 ntBASIC3.14□□□□□ -1.91
CCDC27Q2M243 SNORA6-201ENST00000384033 151 ntBASIC3.14□□□□□ -1.91
CCDC27Q2M243 SNORA8.3-201ENST00000384679 139 ntBASIC3.14□□□□□ -1.91
CCDC27Q2M243 RNU6-907P-201ENST00000390924 102 ntBASIC3.14□□□□□ -1.91
CCDC27Q2M243 MTND5P15-201ENST00000434246 349 ntBASIC3.14□□□□□ -1.91
CCDC27Q2M243 MTND2P29-201ENST00000438595 412 ntBASIC3.14□□□□□ -1.91
CCDC27Q2M243 TRBV12-1-201ENST00000479785 344 ntBASIC3.14□□□□□ -1.91
CCDC27Q2M243 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC27Q2M243 AC011604.1-201ENST00000545978 196 ntBASIC3.14□□□□□ -1.91
CCDC27Q2M243 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.14□□□□□ -1.91
CCDC27Q2M243 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCDC27Q2M243 SNORD23.1-201ENST00000408212 104 ntBASIC3.13□□□□□ -1.91
CCDC27Q2M243 AC233266.1-201ENST00000454518 96 ntBASIC3.13□□□□□ -1.91
CCDC27Q2M243 RNU6-437P-201ENST00000459408 95 ntBASIC3.13□□□□□ -1.91
CCDC27Q2M243 AC026436.1-201ENST00000510537 270 ntBASIC3.13□□□□□ -1.91
CCDC27Q2M243 RNU6-341P-201ENST00000516973 96 ntBASIC3.13□□□□□ -1.91
CCDC27Q2M243 AC100767.1-201ENST00000528178 123 ntBASIC3.13□□□□□ -1.91
CCDC27Q2M243 AC084364.2-201ENST00000546924 395 ntBASIC3.13□□□□□ -1.91
CCDC27Q2M243 MIR4724-201ENST00000579485 89 ntBASIC3.13□□□□□ -1.91
CCDC27Q2M243 AC091178.2-201ENST00000584401 117 ntBASIC3.13□□□□□ -1.91
CCDC27Q2M243 AC242852.1-201ENST00000612151 96 ntBASIC3.13□□□□□ -1.91
CCDC27Q2M243 AC244015.1-201ENST00000622301 99 ntBASIC3.13□□□□□ -1.91
CCDC27Q2M243 AC100821.1-201ENST00000523153 2479 ntBASIC3.13□□□□□ -1.91
CCDC27Q2M243 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC27Q2M243 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC27Q2M243 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC27Q2M243 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC27Q2M243 Z82195.2-201ENST00000612348 18351 ntBASIC3.12□□□□□ -1.91
CCDC27Q2M243 Y_RNA.29-201ENST00000362570 113 ntBASIC3.12□□□□□ -1.91
CCDC27Q2M243 RNU6-653P-201ENST00000363074 106 ntBASIC3.12□□□□□ -1.91
CCDC27Q2M243 Y_RNA.267-201ENST00000364679 109 ntBASIC3.12□□□□□ -1.91
CCDC27Q2M243 Y_RNA.785-201ENST00000384290 109 ntBASIC3.12□□□□□ -1.91
CCDC27Q2M243 RNA5SP501-201ENST00000410990 112 ntBASIC3.12□□□□□ -1.91
CCDC27Q2M243 Y_RNA.621-201ENST00000411065 96 ntBASIC3.12□□□□□ -1.91
CCDC27Q2M243 RNA5SP450-201ENST00000411206 102 ntBASIC3.12□□□□□ -1.91
CCDC27Q2M243 Y_RNA.793-201ENST00000411222 111 ntBASIC3.12□□□□□ -1.91
CCDC27Q2M243 Y_RNA.644-201ENST00000459006 113 ntBASIC3.12□□□□□ -1.91
CCDC27Q2M243 AC234781.5-201ENST00000508429 271 ntBASIC3.12□□□□□ -1.91
CCDC27Q2M243 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC27Q2M243 RNVU1-2-201ENST00000516326 135 ntBASIC3.12□□□□□ -1.91
CCDC27Q2M243 Y_RNA.674-201ENST00000516362 113 ntBASIC3.12□□□□□ -1.91
CCDC27Q2M243 RNU6-1291P-201ENST00000516591 104 ntBASIC3.12□□□□□ -1.91
CCDC27Q2M243 MIR5007-201ENST00000583098 95 ntBASIC3.12□□□□□ -1.91
CCDC27Q2M243 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC27Q2M243 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC27Q2M243 RNU6-1020P-201ENST00000363684 107 ntBASIC3.11□□□□□ -1.91
CCDC27Q2M243 RNU4-17P-201ENST00000365598 141 ntBASIC3.11□□□□□ -1.91
CCDC27Q2M243 MIR526A2-201ENST00000390198 65 ntBASIC3.11□□□□□ -1.91
CCDC27Q2M243 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC27Q2M243 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.11□□□□□ -1.91
CCDC27Q2M243 SNORA81.3-201ENST00000517283 198 ntBASIC3.11□□□□□ -1.91
CCDC27Q2M243 RNU2-19P-201ENST00000517288 84 ntBASIC3.11□□□□□ -1.91
CCDC27Q2M243 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC27Q2M243 MIR5688-201ENST00000580619 83 ntBASIC3.11□□□□□ -1.91
CCDC27Q2M243 AC012640.5-201ENST00000623897 319 ntBASIC3.11□□□□□ -1.91
CCDC27Q2M243 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC27Q2M243 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC27Q2M243 RNA5SP126-201ENST00000365092 109 ntBASIC3.1□□□□□ -1.91
CCDC27Q2M243 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CCDC27Q2M243 RNY3P16-201ENST00000516338 101 ntBASIC3.1□□□□□ -1.91
CCDC27Q2M243 RNU6-182P-201ENST00000516970 105 ntBASIC3.1□□□□□ -1.91
CCDC27Q2M243 AC046143.2-201ENST00000609789 160 ntBASIC3.1□□□□□ -1.91
CCDC27Q2M243 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CCDC27Q2M243 RNU6-923P-201ENST00000364753 107 ntBASIC3.09□□□□□ -1.91
CCDC27Q2M243 RNU6-493P-201ENST00000391321 108 ntBASIC3.09□□□□□ -1.91
CCDC27Q2M243 Z98949.2-201ENST00000440996 144 ntBASIC3.09□□□□□ -1.91
CCDC27Q2M243 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC27Q2M243 AL358944.1-201ENST00000528537 144 ntBASIC3.09□□□□□ -1.91
CCDC27Q2M243 MIR4435-1-201ENST00000582552 80 ntBASIC3.09□□□□□ -1.91
CCDC27Q2M243 RNU6-674P-201ENST00000363831 107 ntBASIC3.08□□□□□ -1.92
CCDC27Q2M243 RNU4-10P-201ENST00000364383 140 ntBASIC3.08□□□□□ -1.92
CCDC27Q2M243 RNU6-301P-201ENST00000384277 107 ntBASIC3.08□□□□□ -1.92
CCDC27Q2M243 MIR626-201ENST00000385032 94 ntBASIC3.08□□□□□ -1.92
CCDC27Q2M243 RNA5SP508-201ENST00000411327 119 ntBASIC3.08□□□□□ -1.92
CCDC27Q2M243 AC245047.3-201ENST00000429428 127 ntBASIC3.08□□□□□ -1.92
CCDC27Q2M243 AC245047.4-201ENST00000433189 144 ntBASIC3.08□□□□□ -1.92
CCDC27Q2M243 RNU2-56P-201ENST00000516826 190 ntBASIC3.08□□□□□ -1.92
CCDC27Q2M243 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC27Q2M243 AP002004.2-201ENST00000531656 154 ntBASIC3.08□□□□□ -1.92
CCDC27Q2M243 AC121758.2-201ENST00000553271 193 ntBASIC3.08□□□□□ -1.92
CCDC27Q2M243 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC27Q2M243 AC068700.1-201ENST00000565862 3754 ntBASIC3.07□□□□□ -1.92
CCDC27Q2M243 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
CCDC27Q2M243 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms