Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNU7-193P-201ENST00000516723 65 ntBASIC2.07□□□□□ -2.08
RAE1P78406 AC024405.2-202ENST00000532731 184 ntBASIC2.07□□□□□ -2.08
RAE1P78406 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.07□□□□□ -2.08
RAE1P78406 AC127455.1-201ENST00000565496 145 ntBASIC2.07□□□□□ -2.08
RAE1P78406 MIR4529-201ENST00000578110 78 ntBASIC2.07□□□□□ -2.08
RAE1P78406 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.07□□□□□ -2.08
RAE1P78406 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RAE1P78406 AC134026.1-201ENST00000623249 2239 ntBASIC2.06□□□□□ -2.08
RAE1P78406 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RAE1P78406 MIR411-201ENST00000362239 96 ntBASIC2.06□□□□□ -2.08
RAE1P78406 RNU6-1205P-201ENST00000363625 106 ntBASIC2.06□□□□□ -2.08
RAE1P78406 Y_RNA.262-201ENST00000364641 102 ntBASIC2.06□□□□□ -2.08
RAE1P78406 U8.7-201ENST00000364940 136 ntBASIC2.06□□□□□ -2.08
RAE1P78406 SNORA8-201ENST00000384574 139 ntBASIC2.06□□□□□ -2.08
RAE1P78406 SNORA48.1-201ENST00000390879 135 ntBASIC2.06□□□□□ -2.08
RAE1P78406 MTND2P29-201ENST00000438595 412 ntBASIC2.06□□□□□ -2.08
RAE1P78406 RPS4XP11-201ENST00000446897 772 ntBASIC2.06□□□□□ -2.08
RAE1P78406 AC100767.1-201ENST00000528178 123 ntBASIC2.06□□□□□ -2.08
RAE1P78406 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.06□□□□□ -2.08
RAE1P78406 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
RAE1P78406 AC018630.2-201ENST00000534866 2403 ntBASIC2.06□□□□□ -2.08
RAE1P78406 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RAE1P78406 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
RAE1P78406 Y_RNA.297-201ENST00000364950 91 ntBASIC2.05□□□□□ -2.08
RAE1P78406 SNORA72-201ENST00000384339 132 ntBASIC2.05□□□□□ -2.08
RAE1P78406 SNORA48.3-201ENST00000391081 134 ntBASIC2.05□□□□□ -2.08
RAE1P78406 RNU7-94P-201ENST00000459576 63 ntBASIC2.05□□□□□ -2.08
RAE1P78406 AC117454.1-201ENST00000491120 168 ntBASIC2.05□□□□□ -2.08
RAE1P78406 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.05□□□□□ -2.08
RAE1P78406 SCARNA16.3-201ENST00000516595 184 ntBASIC2.05□□□□□ -2.08
RAE1P78406 RNU6-1096P-201ENST00000517089 102 ntBASIC2.05□□□□□ -2.08
RAE1P78406 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.05□□□□□ -2.08
RAE1P78406 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.05□□□□□ -2.08
RAE1P78406 POLR3GP1-201ENST00000594073 261 ntBASIC2.05□□□□□ -2.08
RAE1P78406 AL365265.1-201ENST00000621045 234 ntBASIC2.05□□□□□ -2.08
RAE1P78406 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.05□□□□□ -2.08
RAE1P78406 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
RAE1P78406 RNU6-653P-201ENST00000363074 106 ntBASIC2.04□□□□□ -2.08
RAE1P78406 RNU6-144P-201ENST00000383951 107 ntBASIC2.04□□□□□ -2.08
RAE1P78406 Y_RNA.785-201ENST00000384290 109 ntBASIC2.04□□□□□ -2.08
RAE1P78406 MIR562-201ENST00000384894 95 ntBASIC2.04□□□□□ -2.08
RAE1P78406 RNU4-53P-201ENST00000410828 140 ntBASIC2.04□□□□□ -2.08
RAE1P78406 RNA5SP450-201ENST00000411206 102 ntBASIC2.04□□□□□ -2.08
RAE1P78406 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RAE1P78406 AC091021.1-201ENST00000468051 388 ntBASIC2.04□□□□□ -2.08
RAE1P78406 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.04□□□□□ -2.08
RAE1P78406 AC091178.2-201ENST00000584401 117 ntBASIC2.04□□□□□ -2.08
RAE1P78406 Z83818.1-201ENST00000603584 150 ntBASIC2.04□□□□□ -2.08
RAE1P78406 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.04□□□□□ -2.08
RAE1P78406 AC012640.5-201ENST00000623897 319 ntBASIC2.04□□□□□ -2.08
RAE1P78406 MIR6079-201ENST00000635807 62 ntBASIC2.04□□□□□ -2.08
RAE1P78406 AC080100.1-201ENST00000624239 5356 ntBASIC2.04□□□□□ -2.08
RAE1P78406 AC068700.1-201ENST00000565862 3754 ntBASIC2.04□□□□□ -2.08
RAE1P78406 AC100821.1-201ENST00000523153 2479 ntBASIC2.03□□□□□ -2.08
RAE1P78406 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RAE1P78406 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RAE1P78406 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RAE1P78406 RNU6-1019P-201ENST00000364424 107 ntBASIC2.03□□□□□ -2.08
RAE1P78406 RNU6-136P-201ENST00000384663 107 ntBASIC2.03□□□□□ -2.08
RAE1P78406 MIR526A2-201ENST00000390198 65 ntBASIC2.03□□□□□ -2.08
RAE1P78406 SNORD23.1-201ENST00000408212 104 ntBASIC2.03□□□□□ -2.08
RAE1P78406 SNORA36B-201ENST00000410438 131 ntBASIC2.03□□□□□ -2.08
RAE1P78406 AC069257.2-201ENST00000441819 155 ntBASIC2.03□□□□□ -2.08
RAE1P78406 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.03□□□□□ -2.08
RAE1P78406 RPL23AP54-201ENST00000495129 419 ntBASIC2.03□□□□□ -2.08
RAE1P78406 AL163195.1-201ENST00000496941 348 ntBASIC2.03□□□□□ -2.08
RAE1P78406 RNU6-341P-201ENST00000516973 96 ntBASIC2.03□□□□□ -2.08
RAE1P78406 MIR5094-201ENST00000578766 85 ntBASIC2.03□□□□□ -2.08
RAE1P78406 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.03□□□□□ -2.08
RAE1P78406 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
RAE1P78406 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
RAE1P78406 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
RAE1P78406 RNU4-82P-201ENST00000362443 140 ntBASIC2.02□□□□□ -2.09
RAE1P78406 Y_RNA.293-201ENST00000364908 93 ntBASIC2.02□□□□□ -2.09
RAE1P78406 RNU4-17P-201ENST00000365598 141 ntBASIC2.02□□□□□ -2.09
RAE1P78406 RNA5SP501-201ENST00000410990 112 ntBASIC2.02□□□□□ -2.09
RAE1P78406 AC245047.4-201ENST00000433189 144 ntBASIC2.02□□□□□ -2.09
RAE1P78406 RNU6-437P-201ENST00000459408 95 ntBASIC2.02□□□□□ -2.09
RAE1P78406 TRBV12-1-201ENST00000479785 344 ntBASIC2.02□□□□□ -2.09
RAE1P78406 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.02□□□□□ -2.09
RAE1P78406 RNVU1-2-201ENST00000516326 135 ntBASIC2.02□□□□□ -2.09
RAE1P78406 RNA5SP82-201ENST00000516707 92 ntBASIC2.02□□□□□ -2.09
RAE1P78406 RNU2-19P-201ENST00000517288 84 ntBASIC2.02□□□□□ -2.09
RAE1P78406 CBX3P4-201ENST00000538909 354 ntBASIC2.02□□□□□ -2.09
RAE1P78406 MIR5688-201ENST00000580619 83 ntBASIC2.02□□□□□ -2.09
RAE1P78406 AC078899.2-201ENST00000595282 212 ntBASIC2.02□□□□□ -2.09
RAE1P78406 Y_RNA.802-201ENST00000614892 130 ntBASIC2.02□□□□□ -2.09
RAE1P78406 MIR6132-201ENST00000622083 109 ntBASIC2.02□□□□□ -2.09
RAE1P78406 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RAE1P78406 AC245060.5-201ENST00000610778 3293 ntBASIC2.01□□□□□ -2.09
RAE1P78406 Y_RNA.29-201ENST00000362570 113 ntBASIC2.01□□□□□ -2.09
RAE1P78406 RNU6-674P-201ENST00000363831 107 ntBASIC2.01□□□□□ -2.09
RAE1P78406 SNORA8.3-201ENST00000384679 139 ntBASIC2.01□□□□□ -2.09
RAE1P78406 RNU2-64P-201ENST00000411315 191 ntBASIC2.01□□□□□ -2.09
RAE1P78406 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.01□□□□□ -2.09
RAE1P78406 AL138752.1-201ENST00000452964 351 ntBASIC2.01□□□□□ -2.09
RAE1P78406 Y_RNA.644-201ENST00000459006 113 ntBASIC2.01□□□□□ -2.09
RAE1P78406 Y_RNA.674-201ENST00000516362 113 ntBASIC2.01□□□□□ -2.09
RAE1P78406 SNORA81.3-201ENST00000517283 198 ntBASIC2.01□□□□□ -2.09
RAE1P78406 AL358944.1-201ENST00000528537 144 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms