Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
RPS3AP61247 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.65□□□□□ -2.15
RPS3AP61247 Y_RNA.267-201ENST00000364679 109 ntBASIC1.65□□□□□ -2.15
RPS3AP61247 Y_RNA.326-201ENST00000365176 113 ntBASIC1.65□□□□□ -2.15
RPS3AP61247 SNORA63.7-201ENST00000365579 123 ntBASIC1.65□□□□□ -2.15
RPS3AP61247 AL078595.1-201ENST00000404458 226 ntBASIC1.65□□□□□ -2.15
RPS3AP61247 STAG3L5P-204ENST00000443759 179 ntBASIC1.65□□□□□ -2.15
RPS3AP61247 AC245517.4-201ENST00000448601 281 ntBASIC1.65□□□□□ -2.15
RPS3AP61247 AC022616.4-201ENST00000522985 181 ntBASIC1.65□□□□□ -2.15
RPS3AP61247 AC136932.1-201ENST00000574771 208 ntBASIC1.65□□□□□ -2.15
RPS3AP61247 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.65□□□□□ -2.15
RPS3AP61247 AC011373.1-201ENST00000607270 237 ntBASIC1.65□□□□□ -2.15
RPS3AP61247 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.65□□□□□ -2.15
RPS3AP61247 AC073349.3-201ENST00000617616 186 ntBASIC1.65□□□□□ -2.15
RPS3AP61247 AL513423.1-201ENST00000621695 132 ntBASIC1.65□□□□□ -2.15
RPS3AP61247 Y_RNA.153-201ENST00000363615 91 ntBASIC1.64□□□□□ -2.15
RPS3AP61247 Y_RNA.265-201ENST00000364677 108 ntBASIC1.64□□□□□ -2.15
RPS3AP61247 RNU6-937P-201ENST00000384325 106 ntBASIC1.64□□□□□ -2.15
RPS3AP61247 Y_RNA.551-201ENST00000384661 102 ntBASIC1.64□□□□□ -2.15
RPS3AP61247 AL162725.1-201ENST00000435405 301 ntBASIC1.64□□□□□ -2.15
RPS3AP61247 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.64□□□□□ -2.15
RPS3AP61247 AC079140.2-201ENST00000506193 142 ntBASIC1.64□□□□□ -2.15
RPS3AP61247 RNA5SP445-201ENST00000515889 115 ntBASIC1.64□□□□□ -2.15
RPS3AP61247 RNU6-397P-201ENST00000516226 104 ntBASIC1.64□□□□□ -2.15
RPS3AP61247 RNU6-1046P-201ENST00000516538 107 ntBASIC1.64□□□□□ -2.15
RPS3AP61247 RNU6-63P-201ENST00000516690 95 ntBASIC1.64□□□□□ -2.15
RPS3AP61247 RNU6-1096P-201ENST00000517089 102 ntBASIC1.64□□□□□ -2.15
RPS3AP61247 Y_RNA.721-201ENST00000517207 102 ntBASIC1.64□□□□□ -2.15
RPS3AP61247 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.64□□□□□ -2.15
RPS3AP61247 AC113195.1-201ENST00000579952 141 ntBASIC1.64□□□□□ -2.15
RPS3AP61247 MIR6845-201ENST00000613182 61 ntBASIC1.64□□□□□ -2.15
RPS3AP61247 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RPS3AP61247 SNORA1B-201ENST00000362535 133 ntBASIC1.63□□□□□ -2.15
RPS3AP61247 Y_RNA.105-201ENST00000363182 111 ntBASIC1.63□□□□□ -2.15
RPS3AP61247 Y_RNA.143-201ENST00000363520 106 ntBASIC1.63□□□□□ -2.15
RPS3AP61247 Y_RNA.202-201ENST00000364083 110 ntBASIC1.63□□□□□ -2.15
RPS3AP61247 Y_RNA.331-201ENST00000365267 102 ntBASIC1.63□□□□□ -2.15
RPS3AP61247 Y_RNA.389-201ENST00000383924 113 ntBASIC1.63□□□□□ -2.15
RPS3AP61247 RNU6-136P-201ENST00000384663 107 ntBASIC1.63□□□□□ -2.15
RPS3AP61247 MIR513A1-201ENST00000385138 129 ntBASIC1.63□□□□□ -2.15
RPS3AP61247 SNORA12.1-201ENST00000390873 148 ntBASIC1.63□□□□□ -2.15
RPS3AP61247 MIR1252-201ENST00000408861 65 ntBASIC1.63□□□□□ -2.15
RPS3AP61247 RNU6-710P-201ENST00000410424 105 ntBASIC1.63□□□□□ -2.15
RPS3AP61247 RNA5SP511-201ENST00000410487 115 ntBASIC1.63□□□□□ -2.15
RPS3AP61247 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.63□□□□□ -2.15
RPS3AP61247 AC113618.1-201ENST00000416747 285 ntBASIC1.63□□□□□ -2.15
RPS3AP61247 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.63□□□□□ -2.15
RPS3AP61247 snoU13.23-201ENST00000458863 104 ntBASIC1.63□□□□□ -2.15
RPS3AP61247 RNU6-1291P-201ENST00000516591 104 ntBASIC1.63□□□□□ -2.15
RPS3AP61247 RNU7-110P-201ENST00000516891 62 ntBASIC1.63□□□□□ -2.15
RPS3AP61247 AC015720.1-201ENST00000565251 277 ntBASIC1.63□□□□□ -2.15
RPS3AP61247 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.63□□□□□ -2.15
RPS3AP61247 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.63□□□□□ -2.15
RPS3AP61247 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
RPS3AP61247 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
RPS3AP61247 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RPS3AP61247 SNORD81.1-201ENST00000363064 77 ntBASIC1.62□□□□□ -2.15
RPS3AP61247 Y_RNA.329-201ENST00000365209 107 ntBASIC1.62□□□□□ -2.15
RPS3AP61247 Y_RNA.455-201ENST00000384230 98 ntBASIC1.62□□□□□ -2.15
RPS3AP61247 RNA5SP482-201ENST00000391269 118 ntBASIC1.62□□□□□ -2.15
RPS3AP61247 AL591806.2-201ENST00000433122 173 ntBASIC1.62□□□□□ -2.15
RPS3AP61247 AC027119.1-201ENST00000440877 241 ntBASIC1.62□□□□□ -2.15
RPS3AP61247 AC108210.2-201ENST00000503681 201 ntBASIC1.62□□□□□ -2.15
RPS3AP61247 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.62□□□□□ -2.15
RPS3AP61247 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.62□□□□□ -2.15
RPS3AP61247 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.62□□□□□ -2.15
RPS3AP61247 AC084768.2-201ENST00000622736 221 ntBASIC1.62□□□□□ -2.15
RPS3AP61247 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.62□□□□□ -2.15
RPS3AP61247 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.62□□□□□ -2.15
RPS3AP61247 Y_RNA.26-201ENST00000362539 101 ntBASIC1.61□□□□□ -2.15
RPS3AP61247 AC117470.1-201ENST00000381974 330 ntBASIC1.61□□□□□ -2.15
RPS3AP61247 RNU4-30P-201ENST00000410245 143 ntBASIC1.61□□□□□ -2.15
RPS3AP61247 RNU6-101P-201ENST00000410323 104 ntBASIC1.61□□□□□ -2.15
RPS3AP61247 RNU6-121P-201ENST00000410525 99 ntBASIC1.61□□□□□ -2.15
RPS3AP61247 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.61□□□□□ -2.15
RPS3AP61247 AC024067.1-201ENST00000426199 223 ntBASIC1.61□□□□□ -2.15
RPS3AP61247 AC233266.1-201ENST00000454518 96 ntBASIC1.61□□□□□ -2.15
RPS3AP61247 RNU6-897P-201ENST00000517135 105 ntBASIC1.61□□□□□ -2.15
RPS3AP61247 RNU6-902P-201ENST00000517212 91 ntBASIC1.61□□□□□ -2.15
RPS3AP61247 MIR3618-201ENST00000580330 88 ntBASIC1.61□□□□□ -2.15
RPS3AP61247 MIR4524B-201ENST00000581569 115 ntBASIC1.61□□□□□ -2.15
RPS3AP61247 AC242852.1-201ENST00000612151 96 ntBASIC1.61□□□□□ -2.15
RPS3AP61247 AC244015.1-201ENST00000622301 99 ntBASIC1.61□□□□□ -2.15
RPS3AP61247 RNU4-13P-201ENST00000364019 141 ntBASIC1.6□□□□□ -2.15
RPS3AP61247 Y_RNA.286-201ENST00000364813 102 ntBASIC1.6□□□□□ -2.15
RPS3AP61247 RNA5SP259-201ENST00000365541 109 ntBASIC1.6□□□□□ -2.15
RPS3AP61247 RNU6-1065P-201ENST00000384513 106 ntBASIC1.6□□□□□ -2.15
RPS3AP61247 RNU6-21P-201ENST00000384710 107 ntBASIC1.6□□□□□ -2.15
RPS3AP61247 MIR660-201ENST00000385235 97 ntBASIC1.6□□□□□ -2.15
RPS3AP61247 RPL30P13-201ENST00000418873 348 ntBASIC1.6□□□□□ -2.15
RPS3AP61247 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.6□□□□□ -2.15
RPS3AP61247 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.6□□□□□ -2.15
RPS3AP61247 AC003989.2-201ENST00000440224 169 ntBASIC1.6□□□□□ -2.15
RPS3AP61247 AL049830.1-201ENST00000468034 425 ntBASIC1.6□□□□□ -2.15
RPS3AP61247 OR9P1P-201ENST00000496431 281 ntBASIC1.6□□□□□ -2.15
RPS3AP61247 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.6□□□□□ -2.15
RPS3AP61247 SNORA25.15-201ENST00000516487 89 ntBASIC1.6□□□□□ -2.15
RPS3AP61247 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.6□□□□□ -2.15
RPS3AP61247 MIR4300-201ENST00000581016 96 ntBASIC1.6□□□□□ -2.15
RPS3AP61247 PRR13P7-201ENST00000605538 430 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms