Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 RNU1-36P-201ENST00000365130 165 ntBASIC0.69□□□□□ -2.3
UBE2NP61088 Y_RNA.361-201ENST00000365515 120 ntBASIC0.69□□□□□ -2.3
UBE2NP61088 SNORA80D-201ENST00000384488 135 ntBASIC0.69□□□□□ -2.3
UBE2NP61088 MIR520G-201ENST00000385064 90 ntBASIC0.69□□□□□ -2.3
UBE2NP61088 SNORD12B-201ENST00000410433 91 ntBASIC0.69□□□□□ -2.3
UBE2NP61088 PIGPP3-201ENST00000425307 415 ntBASIC0.69□□□□□ -2.3
UBE2NP61088 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.69□□□□□ -2.3
UBE2NP61088 RNU7-21P-201ENST00000459430 62 ntBASIC0.69□□□□□ -2.3
UBE2NP61088 RNU6-120P-201ENST00000516077 103 ntBASIC0.69□□□□□ -2.3
UBE2NP61088 RNU6-351P-201ENST00000516097 100 ntBASIC0.69□□□□□ -2.3
UBE2NP61088 AL358944.1-201ENST00000528537 144 ntBASIC0.69□□□□□ -2.3
UBE2NP61088 AC084782.3-201ENST00000612282 578 ntBASIC0.69□□□□□ -2.3
UBE2NP61088 AC092794.2-201ENST00000620933 563 ntBASIC0.69□□□□□ -2.3
UBE2NP61088 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
UBE2NP61088 MIR373-201ENST00000362273 69 ntBASIC0.68□□□□□ -2.3
UBE2NP61088 RNU6-833P-201ENST00000363486 107 ntBASIC0.68□□□□□ -2.3
UBE2NP61088 RNU6-961P-201ENST00000363893 105 ntBASIC0.68□□□□□ -2.3
UBE2NP61088 SNORD114-24-201ENST00000365029 72 ntBASIC0.68□□□□□ -2.3
UBE2NP61088 Y_RNA.482-201ENST00000384377 111 ntBASIC0.68□□□□□ -2.3
UBE2NP61088 MIR891A-201ENST00000401237 79 ntBASIC0.68□□□□□ -2.3
UBE2NP61088 RNU4-14P-201ENST00000410858 122 ntBASIC0.68□□□□□ -2.3
UBE2NP61088 AL354751.2-201ENST00000415471 210 ntBASIC0.68□□□□□ -2.3
UBE2NP61088 POLR2J4-204ENST00000418424 324 ntBASIC0.68□□□□□ -2.3
UBE2NP61088 AC004941.2-201ENST00000427009 228 ntBASIC0.68□□□□□ -2.3
UBE2NP61088 RPEP5-201ENST00000441137 268 ntBASIC0.68□□□□□ -2.3
UBE2NP61088 AC107399.1-201ENST00000451226 265 ntBASIC0.68□□□□□ -2.3
UBE2NP61088 RPL39P39-201ENST00000455840 151 ntBASIC0.68□□□□□ -2.3
UBE2NP61088 LINC01399-202ENST00000458450 244 ntBASIC0.68□□□□□ -2.3
UBE2NP61088 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.68□□□□□ -2.3
UBE2NP61088 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.68□□□□□ -2.3
UBE2NP61088 PDCD5P2-201ENST00000507570 312 ntBASIC0.68□□□□□ -2.3
UBE2NP61088 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.68□□□□□ -2.3
UBE2NP61088 MIR4661-201ENST00000582720 75 ntBASIC0.68□□□□□ -2.3
UBE2NP61088 SNORD115-30-201ENST00000364117 82 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 RNU6-99P-201ENST00000364721 107 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 Y_RNA.336-201ENST00000365307 109 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 SNORA75.4-201ENST00000391278 119 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 AC006461.1-201ENST00000412637 326 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.67□□□□□ -2.3
UBE2NP61088 RPS4XP11-201ENST00000446897 772 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 ELOCP24-201ENST00000456370 334 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 RPL17P19-201ENST00000489069 552 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.67□□□□□ -2.3
UBE2NP61088 RNU6-408P-201ENST00000515910 100 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 SNORD111.1-201ENST00000516421 86 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 RNU6-1337P-201ENST00000516525 95 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 RNU6-197P-201ENST00000516680 100 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 RNU2-12P-201ENST00000517216 168 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 AC023442.1-201ENST00000531247 422 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.67□□□□□ -2.3
UBE2NP61088 AC120024.3-201ENST00000603167 156 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 AL391903.3-201ENST00000612158 163 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 AC106800.4-201ENST00000614905 153 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 AC004467.1-201ENST00000615678 330 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 AC073869.6-201ENST00000640656 341 ntBASIC0.67□□□□□ -2.3
UBE2NP61088 SNORD114-7-201ENST00000362520 77 ntBASIC0.66□□□□□ -2.3
UBE2NP61088 SNORD68-201ENST00000363214 84 ntBASIC0.66□□□□□ -2.3
UBE2NP61088 Y_RNA.172-201ENST00000363765 102 ntBASIC0.66□□□□□ -2.3
UBE2NP61088 MIR605-201ENST00000385078 83 ntBASIC0.66□□□□□ -2.3
UBE2NP61088 MIR100-201ENST00000385259 80 ntBASIC0.66□□□□□ -2.3
UBE2NP61088 AC245047.8-201ENST00000456455 284 ntBASIC0.66□□□□□ -2.3
UBE2NP61088 AC116353.2-201ENST00000505332 712 ntBASIC0.66□□□□□ -2.3
UBE2NP61088 AC114811.1-201ENST00000507207 168 ntBASIC0.66□□□□□ -2.3
UBE2NP61088 AC011604.1-201ENST00000545978 196 ntBASIC0.66□□□□□ -2.3
UBE2NP61088 CYP3A137P-201ENST00000562436 69 ntBASIC0.66□□□□□ -2.3
UBE2NP61088 MIR151B-201ENST00000584249 96 ntBASIC0.66□□□□□ -2.3
UBE2NP61088 AC087588.2-201ENST00000617667 426 ntBASIC0.66□□□□□ -2.3
UBE2NP61088 MIR6788-201ENST00000618842 66 ntBASIC0.66□□□□□ -2.3
UBE2NP61088 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
UBE2NP61088 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.66□□□□□ -2.3
UBE2NP61088 Y_RNA.6-201ENST00000362350 114 ntBASIC0.65□□□□□ -2.31
UBE2NP61088 RNU6-163P-201ENST00000384396 106 ntBASIC0.65□□□□□ -2.31
UBE2NP61088 SNORD116-13-201ENST00000384408 92 ntBASIC0.65□□□□□ -2.31
UBE2NP61088 MIR200A-201ENST00000384875 90 ntBASIC0.65□□□□□ -2.31
UBE2NP61088 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.65□□□□□ -2.31
UBE2NP61088 AL162725.1-201ENST00000435405 301 ntBASIC0.65□□□□□ -2.31
UBE2NP61088 AC093019.1-201ENST00000443135 252 ntBASIC0.65□□□□□ -2.31
UBE2NP61088 SUMO1P2-201ENST00000452524 304 ntBASIC0.65□□□□□ -2.31
UBE2NP61088 CYCTP-201ENST00000504253 315 ntBASIC0.65□□□□□ -2.31
UBE2NP61088 SNORA25.10-201ENST00000515926 124 ntBASIC0.65□□□□□ -2.31
UBE2NP61088 RNA5SP220-201ENST00000516298 104 ntBASIC0.65□□□□□ -2.31
UBE2NP61088 RNU6-358P-201ENST00000516564 75 ntBASIC0.65□□□□□ -2.31
UBE2NP61088 RNU7-30P-201ENST00000516835 62 ntBASIC0.65□□□□□ -2.31
UBE2NP61088 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.65□□□□□ -2.31
UBE2NP61088 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.65□□□□□ -2.31
UBE2NP61088 AC060780.3-201ENST00000589464 80 ntBASIC0.65□□□□□ -2.31
UBE2NP61088 AL591926.4-201ENST00000616895 298 ntBASIC0.65□□□□□ -2.31
UBE2NP61088 PISRT1.1-201ENST00000616930 107 ntBASIC0.65□□□□□ -2.31
UBE2NP61088 AC027279.3-201ENST00000625055 122 ntBASIC0.65□□□□□ -2.31
UBE2NP61088 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.65□□□□□ -2.31
UBE2NP61088 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
UBE2NP61088 Y_RNA.101-201ENST00000363154 102 ntBASIC0.64□□□□□ -2.31
UBE2NP61088 RNU6-926P-201ENST00000384075 107 ntBASIC0.64□□□□□ -2.31
UBE2NP61088 MIR942-201ENST00000401111 86 ntBASIC0.64□□□□□ -2.31
UBE2NP61088 MIR1298-201ENST00000408783 112 ntBASIC0.64□□□□□ -2.31
UBE2NP61088 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.64□□□□□ -2.31
UBE2NP61088 RPL23AP50-201ENST00000434149 455 ntBASIC0.64□□□□□ -2.31
UBE2NP61088 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.64□□□□□ -2.31
UBE2NP61088 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.64□□□□□ -2.31
UBE2NP61088 MIR2053-201ENST00000459295 91 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms