Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 RNU6-596P-201ENST00000365395 98 ntBASIC0.14□□□□□ -2.39
ACTBP60709 Y_RNA.372-201ENST00000365599 102 ntBASIC0.14□□□□□ -2.39
ACTBP60709 Y_RNA.490-201ENST00000384413 102 ntBASIC0.14□□□□□ -2.39
ACTBP60709 MIR329-1-201ENST00000385028 80 ntBASIC0.14□□□□□ -2.39
ACTBP60709 MIR516B2-201ENST00000385190 85 ntBASIC0.14□□□□□ -2.39
ACTBP60709 RNU6-1001P-201ENST00000411265 100 ntBASIC0.14□□□□□ -2.39
ACTBP60709 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.14□□□□□ -2.39
ACTBP60709 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.14□□□□□ -2.39
ACTBP60709 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.14□□□□□ -2.39
ACTBP60709 MTATP6P13-201ENST00000438531 667 ntBASIC0.14□□□□□ -2.39
ACTBP60709 AC093023.1-201ENST00000547375 507 ntBASIC0.14□□□□□ -2.39
ACTBP60709 MIR4431-201ENST00000579990 94 ntBASIC0.14□□□□□ -2.39
ACTBP60709 AC125232.2-201ENST00000592457 143 ntBASIC0.14□□□□□ -2.39
ACTBP60709 AC092954.2-201ENST00000609103 430 ntBASIC0.14□□□□□ -2.39
ACTBP60709 AL357075.2-201ENST00000614906 189 ntBASIC0.14□□□□□ -2.39
ACTBP60709 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
ACTBP60709 RNU6-595P-201ENST00000363944 107 ntBASIC0.13□□□□□ -2.39
ACTBP60709 Y_RNA.258-201ENST00000364613 105 ntBASIC0.13□□□□□ -2.39
ACTBP60709 Y_RNA.405-201ENST00000383979 100 ntBASIC0.13□□□□□ -2.39
ACTBP60709 Y_RNA.451-201ENST00000384200 100 ntBASIC0.13□□□□□ -2.39
ACTBP60709 Y_RNA.524-201ENST00000384564 100 ntBASIC0.13□□□□□ -2.39
ACTBP60709 Y_RNA.561-201ENST00000384694 100 ntBASIC0.13□□□□□ -2.39
ACTBP60709 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
ACTBP60709 MTCO3P10-201ENST00000455912 772 ntBASIC0.13□□□□□ -2.39
ACTBP60709 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.13□□□□□ -2.39
ACTBP60709 AC074133.1-201ENST00000515696 183 ntBASIC0.13□□□□□ -2.39
ACTBP60709 AL158211.1-201ENST00000566763 763 ntBASIC0.13□□□□□ -2.39
ACTBP60709 AC124303.1-201ENST00000605703 360 ntBASIC0.13□□□□□ -2.39
ACTBP60709 AC100812.1-201ENST00000607622 580 ntBASIC0.13□□□□□ -2.39
ACTBP60709 MIR1-1-201ENST00000362147 71 ntBASIC0.12□□□□□ -2.39
ACTBP60709 Y_RNA.168-201ENST00000363740 102 ntBASIC0.12□□□□□ -2.39
ACTBP60709 RNU6-454P-201ENST00000364292 107 ntBASIC0.12□□□□□ -2.39
ACTBP60709 RNU4-45P-201ENST00000365469 141 ntBASIC0.12□□□□□ -2.39
ACTBP60709 RNU6-1145P-201ENST00000384246 107 ntBASIC0.12□□□□□ -2.39
ACTBP60709 MIR1197-201ENST00000408818 88 ntBASIC0.12□□□□□ -2.39
ACTBP60709 AL354751.2-201ENST00000415471 210 ntBASIC0.12□□□□□ -2.39
ACTBP60709 USMG5P1-201ENST00000425964 177 ntBASIC0.12□□□□□ -2.39
ACTBP60709 EIF1P2-201ENST00000428233 350 ntBASIC0.12□□□□□ -2.39
ACTBP60709 USP9YP16-201ENST00000430287 407 ntBASIC0.12□□□□□ -2.39
ACTBP60709 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.12□□□□□ -2.39
ACTBP60709 UQCRBP2-201ENST00000447827 297 ntBASIC0.12□□□□□ -2.39
ACTBP60709 USP9YP23-201ENST00000455085 407 ntBASIC0.12□□□□□ -2.39
ACTBP60709 SNORD123-201ENST00000459473 70 ntBASIC0.12□□□□□ -2.39
ACTBP60709 AC105313.1-201ENST00000509121 353 ntBASIC0.12□□□□□ -2.39
ACTBP60709 SNORA18.7-201ENST00000516910 131 ntBASIC0.12□□□□□ -2.39
ACTBP60709 AP003327.1-201ENST00000529684 127 ntBASIC0.12□□□□□ -2.39
ACTBP60709 LRRC34P1-201ENST00000542742 915 ntBASIC0.12□□□□□ -2.39
ACTBP60709 AC090617.3-201ENST00000573670 475 ntBASIC0.12□□□□□ -2.39
ACTBP60709 AC073114.1-201ENST00000612027 490 ntBASIC0.12□□□□□ -2.39
ACTBP60709 ZNF299P-201ENST00000406845 1804 ntBASIC0.12□□□□□ -2.39
ACTBP60709 Y_RNA.85-201ENST00000363014 111 ntBASIC0.11□□□□□ -2.39
ACTBP60709 Y_RNA.243-201ENST00000364481 109 ntBASIC0.11□□□□□ -2.39
ACTBP60709 Y_RNA.409-201ENST00000383990 98 ntBASIC0.11□□□□□ -2.39
ACTBP60709 Y_RNA.533-201ENST00000384596 114 ntBASIC0.11□□□□□ -2.39
ACTBP60709 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
ACTBP60709 ELOCP24-201ENST00000456370 334 ntBASIC0.11□□□□□ -2.39
ACTBP60709 RNU6-956P-201ENST00000458868 103 ntBASIC0.11□□□□□ -2.39
ACTBP60709 RNU6-63P-201ENST00000516690 95 ntBASIC0.11□□□□□ -2.39
ACTBP60709 MTND2P38-201ENST00000522536 667 ntBASIC0.11□□□□□ -2.39
ACTBP60709 ZNF519P2-201ENST00000557032 169 ntBASIC0.11□□□□□ -2.39
ACTBP60709 AC019193.3-201ENST00000609144 554 ntBASIC0.11□□□□□ -2.39
ACTBP60709 AC015726.2-201ENST00000620112 122 ntBASIC0.11□□□□□ -2.39
ACTBP60709 MIR18A-201ENST00000362310 71 ntBASIC0.1□□□□□ -2.39
ACTBP60709 SNORA2B-201ENST00000384583 137 ntBASIC0.1□□□□□ -2.39
ACTBP60709 RNU6-136P-201ENST00000384663 107 ntBASIC0.1□□□□□ -2.39
ACTBP60709 MIR522-201ENST00000385071 87 ntBASIC0.1□□□□□ -2.39
ACTBP60709 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
ACTBP60709 RNU6-1068P-201ENST00000410958 103 ntBASIC0.1□□□□□ -2.39
ACTBP60709 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.1□□□□□ -2.39
ACTBP60709 MIR3908-201ENST00000579798 126 ntBASIC0.1□□□□□ -2.39
ACTBP60709 MIR4300-201ENST00000581016 96 ntBASIC0.1□□□□□ -2.39
ACTBP60709 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.1□□□□□ -2.39
ACTBP60709 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.1□□□□□ -2.39
ACTBP60709 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.1□□□□□ -2.39
ACTBP60709 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.1□□□□□ -2.39
ACTBP60709 MIR103A1-201ENST00000362165 78 ntBASIC0.09□□□□□ -2.4
ACTBP60709 RNA5SP457-201ENST00000363657 124 ntBASIC0.09□□□□□ -2.4
ACTBP60709 RNA5SP63-201ENST00000391225 112 ntBASIC0.09□□□□□ -2.4
ACTBP60709 RNA5SP95-201ENST00000410319 137 ntBASIC0.09□□□□□ -2.4
ACTBP60709 RNA5SP127-201ENST00000411051 133 ntBASIC0.09□□□□□ -2.4
ACTBP60709 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.09□□□□□ -2.4
ACTBP60709 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.09□□□□□ -2.4
ACTBP60709 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.09□□□□□ -2.4
ACTBP60709 RNU6-256P-201ENST00000516747 97 ntBASIC0.09□□□□□ -2.4
ACTBP60709 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.09□□□□□ -2.4
ACTBP60709 AC018448.1-201ENST00000552843 316 ntBASIC0.09□□□□□ -2.4
ACTBP60709 MIR3672-201ENST00000584290 82 ntBASIC0.09□□□□□ -2.4
ACTBP60709 AL355073.2-201ENST00000612106 557 ntBASIC0.09□□□□□ -2.4
ACTBP60709 AL109933.3-201ENST00000619095 188 ntBASIC0.09□□□□□ -2.4
ACTBP60709 MIR4251-201ENST00000635819 61 ntBASIC0.09□□□□□ -2.4
ACTBP60709 Y_RNA.106-201ENST00000363189 100 ntBASIC0.08□□□□□ -2.4
ACTBP60709 SNORD44.1-201ENST00000363202 61 ntBASIC0.08□□□□□ -2.4
ACTBP60709 Y_RNA.212-201ENST00000364177 102 ntBASIC0.08□□□□□ -2.4
ACTBP60709 RNU6-580P-201ENST00000365159 107 ntBASIC0.08□□□□□ -2.4
ACTBP60709 Y_RNA.370-201ENST00000365589 108 ntBASIC0.08□□□□□ -2.4
ACTBP60709 Y_RNA.476-201ENST00000384347 108 ntBASIC0.08□□□□□ -2.4
ACTBP60709 Y_RNA.530-201ENST00000384587 101 ntBASIC0.08□□□□□ -2.4
ACTBP60709 MIR625-201ENST00000385047 85 ntBASIC0.08□□□□□ -2.4
ACTBP60709 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.08□□□□□ -2.4
ACTBP60709 AC116353.2-201ENST00000505332 712 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms