Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC011476.5-201ENST00000615594 130 ntBASIC1.88□□□□□ -2.11
RHBDL3P58872 RNU4-50P-201ENST00000364361 141 ntBASIC1.87□□□□□ -2.11
RHBDL3P58872 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.87□□□□□ -2.11
RHBDL3P58872 AC024067.1-201ENST00000426199 223 ntBASIC1.87□□□□□ -2.11
RHBDL3P58872 U8.19-201ENST00000459095 133 ntBASIC1.87□□□□□ -2.11
RHBDL3P58872 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.87□□□□□ -2.11
RHBDL3P58872 AC022616.4-201ENST00000522985 181 ntBASIC1.87□□□□□ -2.11
RHBDL3P58872 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.87□□□□□ -2.11
RHBDL3P58872 AC055872.1-201ENST00000570978 278 ntBASIC1.87□□□□□ -2.11
RHBDL3P58872 AL512598.1-201ENST00000610158 273 ntBASIC1.87□□□□□ -2.11
RHBDL3P58872 RNU6-708P-201ENST00000384217 107 ntBASIC1.86□□□□□ -2.11
RHBDL3P58872 AL162725.1-201ENST00000435405 301 ntBASIC1.86□□□□□ -2.11
RHBDL3P58872 U8.20-201ENST00000459445 131 ntBASIC1.86□□□□□ -2.11
RHBDL3P58872 AL049830.1-201ENST00000468034 425 ntBASIC1.86□□□□□ -2.11
RHBDL3P58872 AC005840.1-201ENST00000498412 377 ntBASIC1.86□□□□□ -2.11
RHBDL3P58872 RNU6-1337P-201ENST00000516525 95 ntBASIC1.86□□□□□ -2.11
RHBDL3P58872 SUMO2P16-201ENST00000519475 264 ntBASIC1.86□□□□□ -2.11
RHBDL3P58872 AC006157.1-201ENST00000611750 366 ntBASIC1.86□□□□□ -2.11
RHBDL3P58872 AC104985.2-201ENST00000620598 500 ntBASIC1.86□□□□□ -2.11
RHBDL3P58872 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.86□□□□□ -2.11
RHBDL3P58872 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
RHBDL3P58872 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RHBDL3P58872 SNORA1B-201ENST00000362535 133 ntBASIC1.85□□□□□ -2.11
RHBDL3P58872 RNU6-1175P-201ENST00000365200 107 ntBASIC1.85□□□□□ -2.11
RHBDL3P58872 Y_RNA.395-201ENST00000383945 109 ntBASIC1.85□□□□□ -2.11
RHBDL3P58872 RNU6-997P-201ENST00000384725 107 ntBASIC1.85□□□□□ -2.11
RHBDL3P58872 Y_RNA.570-201ENST00000384750 101 ntBASIC1.85□□□□□ -2.11
RHBDL3P58872 RNU2-61P-201ENST00000411069 191 ntBASIC1.85□□□□□ -2.11
RHBDL3P58872 RPS27P16-201ENST00000425758 201 ntBASIC1.85□□□□□ -2.11
RHBDL3P58872 AC233266.1-201ENST00000454518 96 ntBASIC1.85□□□□□ -2.11
RHBDL3P58872 RPL39P38-201ENST00000467018 153 ntBASIC1.85□□□□□ -2.11
RHBDL3P58872 RNU6-1291P-201ENST00000516591 104 ntBASIC1.85□□□□□ -2.11
RHBDL3P58872 AL161670.1-201ENST00000554348 137 ntBASIC1.85□□□□□ -2.11
RHBDL3P58872 AC024614.2-201ENST00000577584 372 ntBASIC1.85□□□□□ -2.11
RHBDL3P58872 SNORD53B-201ENST00000577887 78 ntBASIC1.85□□□□□ -2.11
RHBDL3P58872 BX248123.2-201ENST00000606318 124 ntBASIC1.85□□□□□ -2.11
RHBDL3P58872 AC242852.1-201ENST00000612151 96 ntBASIC1.85□□□□□ -2.11
RHBDL3P58872 AC090971.5-201ENST00000621102 293 ntBASIC1.85□□□□□ -2.11
RHBDL3P58872 AC244015.1-201ENST00000622301 99 ntBASIC1.85□□□□□ -2.11
RHBDL3P58872 AL161722.3-201ENST00000605789 2983 ntBASIC1.84□□□□□ -2.11
RHBDL3P58872 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.11
RHBDL3P58872 RNU4-76P-201ENST00000364509 141 ntBASIC1.84□□□□□ -2.11
RHBDL3P58872 Y_RNA.439-201ENST00000384119 94 ntBASIC1.84□□□□□ -2.11
RHBDL3P58872 RNY1P14-201ENST00000384426 108 ntBASIC1.84□□□□□ -2.11
RHBDL3P58872 RPS29P23-201ENST00000458635 123 ntBASIC1.84□□□□□ -2.11
RHBDL3P58872 TRMT112P2-201ENST00000512910 132 ntBASIC1.84□□□□□ -2.11
RHBDL3P58872 Y_RNA.673-201ENST00000516306 88 ntBASIC1.84□□□□□ -2.11
RHBDL3P58872 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RHBDL3P58872 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.84□□□□□ -2.11
RHBDL3P58872 AC015720.1-201ENST00000565251 277 ntBASIC1.84□□□□□ -2.11
RHBDL3P58872 MIR4423-201ENST00000580922 80 ntBASIC1.84□□□□□ -2.11
RHBDL3P58872 AL365434.2-201ENST00000607979 234 ntBASIC1.84□□□□□ -2.11
RHBDL3P58872 AL078604.3-201ENST00000615580 211 ntBASIC1.84□□□□□ -2.11
RHBDL3P58872 Y_RNA.226-201ENST00000364337 114 ntBASIC1.83□□□□□ -2.12
RHBDL3P58872 RNU6-424P-201ENST00000384367 105 ntBASIC1.83□□□□□ -2.12
RHBDL3P58872 RNU6-1105P-201ENST00000384774 107 ntBASIC1.83□□□□□ -2.12
RHBDL3P58872 MIR1302-11-201ENST00000408051 138 ntBASIC1.83□□□□□ -2.12
RHBDL3P58872 MIR1302-9-201ENST00000408365 138 ntBASIC1.83□□□□□ -2.12
RHBDL3P58872 MIR1302-10-201ENST00000408734 138 ntBASIC1.83□□□□□ -2.12
RHBDL3P58872 MIR1302-2-201ENST00000607096 138 ntBASIC1.83□□□□□ -2.12
RHBDL3P58872 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
RHBDL3P58872 RNU6-199P-201ENST00000362954 107 ntBASIC1.82□□□□□ -2.12
RHBDL3P58872 RNU5E-4P-201ENST00000364931 120 ntBASIC1.82□□□□□ -2.12
RHBDL3P58872 SNORD14.1-201ENST00000365609 90 ntBASIC1.82□□□□□ -2.12
RHBDL3P58872 Y_RNA.424-201ENST00000384063 103 ntBASIC1.82□□□□□ -2.12
RHBDL3P58872 Y_RNA.458-201ENST00000384240 102 ntBASIC1.82□□□□□ -2.12
RHBDL3P58872 MIR517C-201ENST00000385103 95 ntBASIC1.82□□□□□ -2.12
RHBDL3P58872 SNORA67.6-201ENST00000391093 99 ntBASIC1.82□□□□□ -2.12
RHBDL3P58872 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.82□□□□□ -2.12
RHBDL3P58872 AL354751.2-201ENST00000415471 210 ntBASIC1.82□□□□□ -2.12
RHBDL3P58872 AC092473.1-201ENST00000441098 221 ntBASIC1.82□□□□□ -2.12
RHBDL3P58872 OR9P1P-201ENST00000496431 281 ntBASIC1.82□□□□□ -2.12
RHBDL3P58872 RNU6-436P-201ENST00000516171 114 ntBASIC1.82□□□□□ -2.12
RHBDL3P58872 RNA5SP168-201ENST00000516642 112 ntBASIC1.82□□□□□ -2.12
RHBDL3P58872 AL513534.2-201ENST00000603836 250 ntBASIC1.82□□□□□ -2.12
RHBDL3P58872 AC011373.1-201ENST00000607270 237 ntBASIC1.82□□□□□ -2.12
RHBDL3P58872 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.82□□□□□ -2.12
RHBDL3P58872 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
RHBDL3P58872 RNY1P10-201ENST00000363268 113 ntBASIC1.81□□□□□ -2.12
RHBDL3P58872 RNU6-867P-201ENST00000364956 107 ntBASIC1.81□□□□□ -2.12
RHBDL3P58872 Y_RNA.460-201ENST00000384255 102 ntBASIC1.81□□□□□ -2.12
RHBDL3P58872 SNORD63-201ENST00000384262 68 ntBASIC1.81□□□□□ -2.12
RHBDL3P58872 RNU6-136P-201ENST00000384663 107 ntBASIC1.81□□□□□ -2.12
RHBDL3P58872 RNA5SP511-201ENST00000410487 115 ntBASIC1.81□□□□□ -2.12
RHBDL3P58872 RN7SKP51-201ENST00000410781 304 ntBASIC1.81□□□□□ -2.12
RHBDL3P58872 RNU6-1199P-201ENST00000411249 104 ntBASIC1.81□□□□□ -2.12
RHBDL3P58872 MCFD2P1-201ENST00000417812 300 ntBASIC1.81□□□□□ -2.12
RHBDL3P58872 AL135790.2-201ENST00000437701 267 ntBASIC1.81□□□□□ -2.12
RHBDL3P58872 Y_RNA.639-201ENST00000458981 102 ntBASIC1.81□□□□□ -2.12
RHBDL3P58872 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.81□□□□□ -2.12
RHBDL3P58872 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.81□□□□□ -2.12
RHBDL3P58872 RNU6-322P-201ENST00000516010 103 ntBASIC1.81□□□□□ -2.12
RHBDL3P58872 RNU6-63P-201ENST00000516690 95 ntBASIC1.81□□□□□ -2.12
RHBDL3P58872 SNORD58B-201ENST00000607313 66 ntBASIC1.81□□□□□ -2.12
RHBDL3P58872 uc_338.22-201ENST00000622722 187 ntBASIC1.81□□□□□ -2.12
RHBDL3P58872 AC090574.1-201ENST00000623186 233 ntBASIC1.81□□□□□ -2.12
RHBDL3P58872 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RHBDL3P58872 Y_RNA.331-201ENST00000365267 102 ntBASIC1.8□□□□□ -2.12
RHBDL3P58872 SNORA63.7-201ENST00000365579 123 ntBASIC1.8□□□□□ -2.12
RHBDL3P58872 SNORA12.1-201ENST00000390873 148 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 303.9 ms