Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 RNU6-326P-201ENST00000365480 107 ntBASIC1.84□□□□□ -2.11
CLDN2P57739 RNU6-296P-201ENST00000384608 107 ntBASIC1.84□□□□□ -2.11
CLDN2P57739 Y_RNA.541-201ENST00000384640 113 ntBASIC1.84□□□□□ -2.11
CLDN2P57739 MIR215-201ENST00000384858 110 ntBASIC1.84□□□□□ -2.11
CLDN2P57739 MIR9-3-201ENST00000385084 90 ntBASIC1.84□□□□□ -2.11
CLDN2P57739 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CLDN2P57739 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.84□□□□□ -2.11
CLDN2P57739 RNU6-1203P-201ENST00000410703 110 ntBASIC1.84□□□□□ -2.11
CLDN2P57739 RPL23AP6-201ENST00000446637 472 ntBASIC1.84□□□□□ -2.11
CLDN2P57739 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.84□□□□□ -2.11
CLDN2P57739 RNA5SP233-201ENST00000459153 113 ntBASIC1.84□□□□□ -2.11
CLDN2P57739 RNA5SP57-201ENST00000459463 123 ntBASIC1.84□□□□□ -2.11
CLDN2P57739 RPS29P11-201ENST00000496507 171 ntBASIC1.84□□□□□ -2.11
CLDN2P57739 RNU2-31P-201ENST00000516954 155 ntBASIC1.84□□□□□ -2.11
CLDN2P57739 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.84□□□□□ -2.11
CLDN2P57739 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.84□□□□□ -2.11
CLDN2P57739 AC073413.2-201ENST00000604332 360 ntBASIC1.84□□□□□ -2.11
CLDN2P57739 MIR6840-201ENST00000611937 71 ntBASIC1.84□□□□□ -2.11
CLDN2P57739 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.83□□□□□ -2.12
CLDN2P57739 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.83□□□□□ -2.12
CLDN2P57739 AL596028.1-201ENST00000326971 197 ntBASIC1.83□□□□□ -2.12
CLDN2P57739 Y_RNA.368-201ENST00000365547 113 ntBASIC1.83□□□□□ -2.12
CLDN2P57739 Y_RNA.418-201ENST00000384029 102 ntBASIC1.83□□□□□ -2.12
CLDN2P57739 Y_RNA.456-201ENST00000384232 111 ntBASIC1.83□□□□□ -2.12
CLDN2P57739 MIR1302-3-201ENST00000408128 138 ntBASIC1.83□□□□□ -2.12
CLDN2P57739 MIR1302-6-201ENST00000408466 90 ntBASIC1.83□□□□□ -2.12
CLDN2P57739 RNU6-855P-201ENST00000410395 104 ntBASIC1.83□□□□□ -2.12
CLDN2P57739 RNU2-7P-201ENST00000410794 178 ntBASIC1.83□□□□□ -2.12
CLDN2P57739 AL356379.1-201ENST00000414105 126 ntBASIC1.83□□□□□ -2.12
CLDN2P57739 MTCYBP9-201ENST00000431021 303 ntBASIC1.83□□□□□ -2.12
CLDN2P57739 MTND3P2-201ENST00000438452 342 ntBASIC1.83□□□□□ -2.12
CLDN2P57739 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.83□□□□□ -2.12
CLDN2P57739 TRBVB-201ENST00000477100 408 ntBASIC1.83□□□□□ -2.12
CLDN2P57739 RNA5SP458-201ENST00000516188 119 ntBASIC1.83□□□□□ -2.12
CLDN2P57739 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.83□□□□□ -2.12
CLDN2P57739 AC084768.2-201ENST00000622736 221 ntBASIC1.83□□□□□ -2.12
CLDN2P57739 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CLDN2P57739 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CLDN2P57739 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLDN2P57739 RNA5SP37-201ENST00000365420 130 ntBASIC1.82□□□□□ -2.12
CLDN2P57739 Y_RNA.376-201ENST00000365638 108 ntBASIC1.82□□□□□ -2.12
CLDN2P57739 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.82□□□□□ -2.12
CLDN2P57739 RNU6-950P-201ENST00000384651 107 ntBASIC1.82□□□□□ -2.12
CLDN2P57739 Y_RNA.556-201ENST00000384677 113 ntBASIC1.82□□□□□ -2.12
CLDN2P57739 MIR520G-201ENST00000385064 90 ntBASIC1.82□□□□□ -2.12
CLDN2P57739 AL162725.1-201ENST00000435405 301 ntBASIC1.82□□□□□ -2.12
CLDN2P57739 AC022254.1-201ENST00000567857 235 ntBASIC1.82□□□□□ -2.12
CLDN2P57739 MIR4299-201ENST00000577899 72 ntBASIC1.82□□□□□ -2.12
CLDN2P57739 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.82□□□□□ -2.12
CLDN2P57739 AL162730.1-201ENST00000605734 292 ntBASIC1.82□□□□□ -2.12
CLDN2P57739 AL627230.6-201ENST00000611129 280 ntBASIC1.82□□□□□ -2.12
CLDN2P57739 MIR6079-201ENST00000635807 62 ntBASIC1.82□□□□□ -2.12
CLDN2P57739 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.81□□□□□ -2.12
CLDN2P57739 SNORA25.1-201ENST00000362326 128 ntBASIC1.81□□□□□ -2.12
CLDN2P57739 RNU4-80P-201ENST00000363200 141 ntBASIC1.81□□□□□ -2.12
CLDN2P57739 Y_RNA.341-201ENST00000365341 102 ntBASIC1.81□□□□□ -2.12
CLDN2P57739 RNU6-514P-201ENST00000384208 107 ntBASIC1.81□□□□□ -2.12
CLDN2P57739 Y_RNA.461-201ENST00000384263 103 ntBASIC1.81□□□□□ -2.12
CLDN2P57739 Y_RNA.512-201ENST00000384518 102 ntBASIC1.81□□□□□ -2.12
CLDN2P57739 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.81□□□□□ -2.12
CLDN2P57739 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.81□□□□□ -2.12
CLDN2P57739 RPS27P21-201ENST00000486977 252 ntBASIC1.81□□□□□ -2.12
CLDN2P57739 SNORA25.15-201ENST00000516487 89 ntBASIC1.81□□□□□ -2.12
CLDN2P57739 SNORA31.17-201ENST00000516953 127 ntBASIC1.81□□□□□ -2.12
CLDN2P57739 RNU6-570P-201ENST00000517051 105 ntBASIC1.81□□□□□ -2.12
CLDN2P57739 AL161670.1-201ENST00000554348 137 ntBASIC1.81□□□□□ -2.12
CLDN2P57739 MIR3145-201ENST00000580727 82 ntBASIC1.81□□□□□ -2.12
CLDN2P57739 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.81□□□□□ -2.12
CLDN2P57739 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CLDN2P57739 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CLDN2P57739 Y_RNA.310-201ENST00000365063 113 ntBASIC1.8□□□□□ -2.12
CLDN2P57739 AL627390.1-201ENST00000396055 340 ntBASIC1.8□□□□□ -2.12
CLDN2P57739 RNA5SP511-201ENST00000410487 115 ntBASIC1.8□□□□□ -2.12
CLDN2P57739 MTCO1P5-201ENST00000433573 344 ntBASIC1.8□□□□□ -2.12
CLDN2P57739 RPS27P1-201ENST00000450552 247 ntBASIC1.8□□□□□ -2.12
CLDN2P57739 RPS20P10-201ENST00000451209 253 ntBASIC1.8□□□□□ -2.12
CLDN2P57739 SERF1AP1-201ENST00000514575 187 ntBASIC1.8□□□□□ -2.12
CLDN2P57739 RNU6-191P-201ENST00000516295 94 ntBASIC1.8□□□□□ -2.12
CLDN2P57739 RNU6-1338P-201ENST00000516328 91 ntBASIC1.8□□□□□ -2.12
CLDN2P57739 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.8□□□□□ -2.12
CLDN2P57739 RNU6-63P-201ENST00000516690 95 ntBASIC1.8□□□□□ -2.12
CLDN2P57739 RNU6-341P-201ENST00000516973 96 ntBASIC1.8□□□□□ -2.12
CLDN2P57739 RNA5SP437-201ENST00000517249 129 ntBASIC1.8□□□□□ -2.12
CLDN2P57739 AC015720.1-201ENST00000565251 277 ntBASIC1.8□□□□□ -2.12
CLDN2P57739 MIR4713-201ENST00000582691 75 ntBASIC1.8□□□□□ -2.12
CLDN2P57739 AC091178.2-201ENST00000584401 117 ntBASIC1.8□□□□□ -2.12
CLDN2P57739 AC022217.4-201ENST00000604389 163 ntBASIC1.8□□□□□ -2.12
CLDN2P57739 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CLDN2P57739 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CLDN2P57739 MIR335-201ENST00000362173 94 ntBASIC1.79□□□□□ -2.12
CLDN2P57739 RNU4-13P-201ENST00000364019 141 ntBASIC1.79□□□□□ -2.12
CLDN2P57739 RNA5SP190-201ENST00000365222 118 ntBASIC1.79□□□□□ -2.12
CLDN2P57739 SNORD116-13-201ENST00000384408 92 ntBASIC1.79□□□□□ -2.12
CLDN2P57739 Y_RNA.518-201ENST00000384552 113 ntBASIC1.79□□□□□ -2.12
CLDN2P57739 RNU6-360P-201ENST00000390944 104 ntBASIC1.79□□□□□ -2.12
CLDN2P57739 snosnR66.1-201ENST00000391095 99 ntBASIC1.79□□□□□ -2.12
CLDN2P57739 SNORA17.3-201ENST00000391159 129 ntBASIC1.79□□□□□ -2.12
CLDN2P57739 AC245047.3-201ENST00000429428 127 ntBASIC1.79□□□□□ -2.12
CLDN2P57739 SNORD13-201ENST00000459299 104 ntBASIC1.79□□□□□ -2.12
CLDN2P57739 AC136628.3-201ENST00000521868 290 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms