Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RNA5SP330-201ENST00000517096 96 ntBASIC-0.08□□□□□ -2.42
CLDN12P56749 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.08□□□□□ -2.42
CLDN12P56749 AL355375.2-201ENST00000574825 175 ntBASIC-0.08□□□□□ -2.42
CLDN12P56749 MIR5190-201ENST00000581537 80 ntBASIC-0.08□□□□□ -2.42
CLDN12P56749 U6.115-201ENST00000636045 103 ntBASIC-0.08□□□□□ -2.42
CLDN12P56749 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.09□□□□□ -2.42
CLDN12P56749 SNORD114-26-201ENST00000363543 72 ntBASIC-0.09□□□□□ -2.42
CLDN12P56749 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.09□□□□□ -2.42
CLDN12P56749 MIR520F-201ENST00000384824 87 ntBASIC-0.09□□□□□ -2.42
CLDN12P56749 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.09□□□□□ -2.42
CLDN12P56749 AL031667.1-201ENST00000440222 725 ntBASIC-0.09□□□□□ -2.42
CLDN12P56749 MTND1P26-201ENST00000440488 538 ntBASIC-0.09□□□□□ -2.42
CLDN12P56749 RNU6-977P-201ENST00000516411 103 ntBASIC-0.09□□□□□ -2.42
CLDN12P56749 AC022960.3-201ENST00000619794 441 ntBASIC-0.09□□□□□ -2.42
CLDN12P56749 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.1□□□□□ -2.42
CLDN12P56749 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.1□□□□□ -2.43
CLDN12P56749 RNA5SP517-201ENST00000364724 117 ntBASIC-0.1□□□□□ -2.43
CLDN12P56749 MIR514A2-201ENST00000385131 88 ntBASIC-0.1□□□□□ -2.43
CLDN12P56749 MIR514A3-201ENST00000385132 88 ntBASIC-0.1□□□□□ -2.43
CLDN12P56749 RNU6-679P-201ENST00000391003 106 ntBASIC-0.1□□□□□ -2.43
CLDN12P56749 AL139396.1-201ENST00000421137 167 ntBASIC-0.1□□□□□ -2.43
CLDN12P56749 USMG5P1-201ENST00000425964 177 ntBASIC-0.1□□□□□ -2.43
CLDN12P56749 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.1□□□□□ -2.43
CLDN12P56749 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.1□□□□□ -2.43
CLDN12P56749 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.1□□□□□ -2.43
CLDN12P56749 AC022616.4-201ENST00000522985 181 ntBASIC-0.1□□□□□ -2.43
CLDN12P56749 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.1□□□□□ -2.43
CLDN12P56749 AC090617.3-201ENST00000573670 475 ntBASIC-0.1□□□□□ -2.43
CLDN12P56749 AC104260.1-201ENST00000616660 539 ntBASIC-0.1□□□□□ -2.43
CLDN12P56749 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.1□□□□□ -2.43
CLDN12P56749 SNORD118-201ENST00000363593 134 ntBASIC-0.11□□□□□ -2.43
CLDN12P56749 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
CLDN12P56749 SNORD83.1-201ENST00000411362 77 ntBASIC-0.11□□□□□ -2.43
CLDN12P56749 AC083798.1-201ENST00000472671 131 ntBASIC-0.11□□□□□ -2.43
CLDN12P56749 SNORD45.4-201ENST00000516629 73 ntBASIC-0.11□□□□□ -2.43
CLDN12P56749 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.11□□□□□ -2.43
CLDN12P56749 AC112693.2-201ENST00000556538 232 ntBASIC-0.11□□□□□ -2.43
CLDN12P56749 AC040904.1-201ENST00000590850 223 ntBASIC-0.11□□□□□ -2.43
CLDN12P56749 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
CLDN12P56749 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.12□□□□□ -2.43
CLDN12P56749 SNORD114-9-201ENST00000364370 72 ntBASIC-0.12□□□□□ -2.43
CLDN12P56749 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.12□□□□□ -2.43
CLDN12P56749 RNU4-20P-201ENST00000365601 151 ntBASIC-0.12□□□□□ -2.43
CLDN12P56749 ELOCP21-201ENST00000412558 336 ntBASIC-0.12□□□□□ -2.43
CLDN12P56749 AL354751.2-201ENST00000415471 210 ntBASIC-0.12□□□□□ -2.43
CLDN12P56749 AL353193.1-201ENST00000421444 268 ntBASIC-0.12□□□□□ -2.43
CLDN12P56749 UQCRBP2-201ENST00000447827 297 ntBASIC-0.12□□□□□ -2.43
CLDN12P56749 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.12□□□□□ -2.43
CLDN12P56749 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.12□□□□□ -2.43
CLDN12P56749 MIR4290-201ENST00000583807 95 ntBASIC-0.12□□□□□ -2.43
CLDN12P56749 AP001330.5-201ENST00000607176 411 ntBASIC-0.12□□□□□ -2.43
CLDN12P56749 AC092954.2-201ENST00000609103 430 ntBASIC-0.12□□□□□ -2.43
CLDN12P56749 MIR2909-201ENST00000617113 69 ntBASIC-0.12□□□□□ -2.43
CLDN12P56749 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.12□□□□□ -2.43
CLDN12P56749 AC099654.12-201ENST00000639868 649 ntBASIC-0.12□□□□□ -2.43
CLDN12P56749 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.13□□□□□ -2.43
CLDN12P56749 RNU6-254P-201ENST00000363377 107 ntBASIC-0.13□□□□□ -2.43
CLDN12P56749 RNA5SP214-201ENST00000363378 118 ntBASIC-0.13□□□□□ -2.43
CLDN12P56749 RNU6-934P-201ENST00000365154 107 ntBASIC-0.13□□□□□ -2.43
CLDN12P56749 MIR522-201ENST00000385071 87 ntBASIC-0.13□□□□□ -2.43
CLDN12P56749 RNA5SP95-201ENST00000410319 137 ntBASIC-0.13□□□□□ -2.43
CLDN12P56749 RN7SKP287-201ENST00000516546 266 ntBASIC-0.13□□□□□ -2.43
CLDN12P56749 AC093023.1-201ENST00000547375 507 ntBASIC-0.13□□□□□ -2.43
CLDN12P56749 MIR4804-201ENST00000581683 73 ntBASIC-0.13□□□□□ -2.43
CLDN12P56749 SNORA25.18-201ENST00000607153 114 ntBASIC-0.13□□□□□ -2.43
CLDN12P56749 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.13□□□□□ -2.43
CLDN12P56749 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.13□□□□□ -2.43
CLDN12P56749 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.14□□□□□ -2.43
CLDN12P56749 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.14□□□□□ -2.43
CLDN12P56749 SNORD114-5-201ENST00000362928 70 ntBASIC-0.14□□□□□ -2.43
CLDN12P56749 SNORA72.3-201ENST00000365074 132 ntBASIC-0.14□□□□□ -2.43
CLDN12P56749 RNU6-700P-201ENST00000391043 107 ntBASIC-0.14□□□□□ -2.43
CLDN12P56749 SNORD100-201ENST00000408573 76 ntBASIC-0.14□□□□□ -2.43
CLDN12P56749 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.14□□□□□ -2.43
CLDN12P56749 AL353997.1-201ENST00000432936 108 ntBASIC-0.14□□□□□ -2.43
CLDN12P56749 MTND3P16-201ENST00000452205 344 ntBASIC-0.14□□□□□ -2.43
CLDN12P56749 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.14□□□□□ -2.43
CLDN12P56749 AC010486.3-201ENST00000511602 785 ntBASIC-0.14□□□□□ -2.43
CLDN12P56749 RNA5SP94-201ENST00000516917 108 ntBASIC-0.14□□□□□ -2.43
CLDN12P56749 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.14□□□□□ -2.43
CLDN12P56749 AC141557.1-201ENST00000540982 400 ntBASIC-0.14□□□□□ -2.43
CLDN12P56749 MIR548AO-201ENST00000579992 96 ntBASIC-0.14□□□□□ -2.43
CLDN12P56749 AC027449.1-201ENST00000608890 407 ntBASIC-0.14□□□□□ -2.43
CLDN12P56749 AL603755.1-201ENST00000619504 163 ntBASIC-0.14□□□□□ -2.43
CLDN12P56749 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.15□□□□□ -2.43
CLDN12P56749 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.15□□□□□ -2.43
CLDN12P56749 RNU6-596P-201ENST00000365395 98 ntBASIC-0.15□□□□□ -2.43
CLDN12P56749 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.15□□□□□ -2.43
CLDN12P56749 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.15□□□□□ -2.43
CLDN12P56749 RNU6-136P-201ENST00000384663 107 ntBASIC-0.15□□□□□ -2.43
CLDN12P56749 USP9YP16-201ENST00000430287 407 ntBASIC-0.15□□□□□ -2.43
CLDN12P56749 USP9YP23-201ENST00000455085 407 ntBASIC-0.15□□□□□ -2.43
CLDN12P56749 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.15□□□□□ -2.43
CLDN12P56749 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.15□□□□□ -2.43
CLDN12P56749 MIR4528-201ENST00000577763 90 ntBASIC-0.15□□□□□ -2.43
CLDN12P56749 MIR6779-201ENST00000617283 64 ntBASIC-0.15□□□□□ -2.43
CLDN12P56749 Z69908.1-201ENST00000622603 247 ntBASIC-0.15□□□□□ -2.43
CLDN12P56749 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.16□□□□□ -2.44
CLDN12P56749 RNU6-522P-201ENST00000364497 107 ntBASIC-0.16□□□□□ -2.44
CLDN12P56749 RNU6-95P-201ENST00000384697 107 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms