Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MTND4LP26-201ENST00000518144 282 ntBASIC0.43□□□□□ -2.34
CLDN6P56747 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.43□□□□□ -2.34
CLDN6P56747 MIR3672-201ENST00000584290 82 ntBASIC0.43□□□□□ -2.34
CLDN6P56747 MIR3611-201ENST00000584484 83 ntBASIC0.43□□□□□ -2.34
CLDN6P56747 AL162413.1-201ENST00000603198 110 ntBASIC0.43□□□□□ -2.34
CLDN6P56747 AC124864.2-201ENST00000624736 186 ntBASIC0.43□□□□□ -2.34
CLDN6P56747 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
CLDN6P56747 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
CLDN6P56747 SNORD68-201ENST00000363214 84 ntBASIC0.42□□□□□ -2.34
CLDN6P56747 RNU6-136P-201ENST00000384663 107 ntBASIC0.42□□□□□ -2.34
CLDN6P56747 MIR1185-1-201ENST00000408598 86 ntBASIC0.42□□□□□ -2.34
CLDN6P56747 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.42□□□□□ -2.34
CLDN6P56747 AC100812.1-201ENST00000607622 580 ntBASIC0.42□□□□□ -2.34
CLDN6P56747 AC063944.3-201ENST00000609969 533 ntBASIC0.42□□□□□ -2.34
CLDN6P56747 RNU6-595P-201ENST00000363944 107 ntBASIC0.41□□□□□ -2.34
CLDN6P56747 RNU6-117P-201ENST00000365415 107 ntBASIC0.41□□□□□ -2.34
CLDN6P56747 RNU6-259P-201ENST00000383999 107 ntBASIC0.41□□□□□ -2.34
CLDN6P56747 MIR873-201ENST00000401120 77 ntBASIC0.41□□□□□ -2.34
CLDN6P56747 ELOCP21-201ENST00000412558 336 ntBASIC0.41□□□□□ -2.34
CLDN6P56747 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.41□□□□□ -2.34
CLDN6P56747 AC114811.1-201ENST00000507207 168 ntBASIC0.41□□□□□ -2.34
CLDN6P56747 RNU6-1110P-201ENST00000516462 101 ntBASIC0.41□□□□□ -2.34
CLDN6P56747 Y_RNA.704-201ENST00000516851 102 ntBASIC0.41□□□□□ -2.34
CLDN6P56747 AC090617.3-201ENST00000573670 475 ntBASIC0.41□□□□□ -2.34
CLDN6P56747 AC125232.2-201ENST00000592457 143 ntBASIC0.41□□□□□ -2.34
CLDN6P56747 Z83818.1-201ENST00000603584 150 ntBASIC0.41□□□□□ -2.34
CLDN6P56747 RN7SKP299-201ENST00000606679 301 ntBASIC0.41□□□□□ -2.34
CLDN6P56747 RNU6-94P-201ENST00000607728 107 ntBASIC0.41□□□□□ -2.34
CLDN6P56747 AL136317.1-201ENST00000612653 226 ntBASIC0.41□□□□□ -2.34
CLDN6P56747 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.41□□□□□ -2.34
CLDN6P56747 MTND5P16-201ENST00000460269 1703 ntBASIC0.41□□□□□ -2.34
CLDN6P56747 Y_RNA.106-201ENST00000363189 100 ntBASIC0.4□□□□□ -2.35
CLDN6P56747 Y_RNA.490-201ENST00000384413 102 ntBASIC0.4□□□□□ -2.35
CLDN6P56747 MIR520C-201ENST00000385005 87 ntBASIC0.4□□□□□ -2.35
CLDN6P56747 MIR516B2-201ENST00000385190 85 ntBASIC0.4□□□□□ -2.35
CLDN6P56747 RNU1-119P-201ENST00000391122 165 ntBASIC0.4□□□□□ -2.35
CLDN6P56747 MIR1298-201ENST00000408783 112 ntBASIC0.4□□□□□ -2.35
CLDN6P56747 RNU6-994P-201ENST00000410507 111 ntBASIC0.4□□□□□ -2.35
CLDN6P56747 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.4□□□□□ -2.35
CLDN6P56747 RNU7-41P-201ENST00000515917 61 ntBASIC0.4□□□□□ -2.35
CLDN6P56747 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
CLDN6P56747 AP003716.2-201ENST00000528260 108 ntBASIC0.4□□□□□ -2.35
CLDN6P56747 AC011195.1-201ENST00000578177 177 ntBASIC0.4□□□□□ -2.35
CLDN6P56747 U6.115-201ENST00000636045 103 ntBASIC0.4□□□□□ -2.35
CLDN6P56747 MIR3974-201ENST00000637126 96 ntBASIC0.4□□□□□ -2.35
CLDN6P56747 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
CLDN6P56747 Y_RNA.256-201ENST00000364594 104 ntBASIC0.39□□□□□ -2.35
CLDN6P56747 SNORD14.1-201ENST00000365609 90 ntBASIC0.39□□□□□ -2.35
CLDN6P56747 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CLDN6P56747 SNORD116-11-201ENST00000383882 92 ntBASIC0.39□□□□□ -2.35
CLDN6P56747 Y_RNA.414-201ENST00000384011 101 ntBASIC0.39□□□□□ -2.35
CLDN6P56747 RNU6-483P-201ENST00000384088 108 ntBASIC0.39□□□□□ -2.35
CLDN6P56747 RNU6-1067P-201ENST00000384752 107 ntBASIC0.39□□□□□ -2.35
CLDN6P56747 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
CLDN6P56747 RNU6-780P-201ENST00000391030 104 ntBASIC0.39□□□□□ -2.35
CLDN6P56747 MTCYBP10-201ENST00000424905 650 ntBASIC0.39□□□□□ -2.35
CLDN6P56747 RNU6-63P-201ENST00000516690 95 ntBASIC0.39□□□□□ -2.35
CLDN6P56747 SNORA74.3-201ENST00000517108 154 ntBASIC0.39□□□□□ -2.35
CLDN6P56747 AL357075.2-201ENST00000614906 189 ntBASIC0.39□□□□□ -2.35
CLDN6P56747 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.39□□□□□ -2.35
CLDN6P56747 Y_RNA.280-201ENST00000364765 112 ntBASIC0.38□□□□□ -2.35
CLDN6P56747 RNU6-596P-201ENST00000365395 98 ntBASIC0.38□□□□□ -2.35
CLDN6P56747 RNU6-1237P-201ENST00000384777 107 ntBASIC0.38□□□□□ -2.35
CLDN6P56747 MIR329-1-201ENST00000385028 80 ntBASIC0.38□□□□□ -2.35
CLDN6P56747 RNU6-908P-201ENST00000410160 94 ntBASIC0.38□□□□□ -2.35
CLDN6P56747 RNA5SP222-201ENST00000411039 105 ntBASIC0.38□□□□□ -2.35
CLDN6P56747 Y_RNA.621-201ENST00000411065 96 ntBASIC0.38□□□□□ -2.35
CLDN6P56747 AC244098.3-201ENST00000424803 96 ntBASIC0.38□□□□□ -2.35
CLDN6P56747 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.38□□□□□ -2.35
CLDN6P56747 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.38□□□□□ -2.35
CLDN6P56747 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.38□□□□□ -2.35
CLDN6P56747 RNU4-77P-201ENST00000516692 156 ntBASIC0.38□□□□□ -2.35
CLDN6P56747 AC104260.1-201ENST00000616660 539 ntBASIC0.38□□□□□ -2.35
CLDN6P56747 AP000770.2-201ENST00000623694 100 ntBASIC0.38□□□□□ -2.35
CLDN6P56747 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
CLDN6P56747 RNA5SP48-201ENST00000363969 126 ntBASIC0.37□□□□□ -2.35
CLDN6P56747 SNORA36.2-201ENST00000384004 127 ntBASIC0.37□□□□□ -2.35
CLDN6P56747 Y_RNA.498-201ENST00000384460 102 ntBASIC0.37□□□□□ -2.35
CLDN6P56747 RNU6-35P-201ENST00000384530 107 ntBASIC0.37□□□□□ -2.35
CLDN6P56747 RNU2-66P-201ENST00000410650 161 ntBASIC0.37□□□□□ -2.35
CLDN6P56747 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.37□□□□□ -2.35
CLDN6P56747 EIF1P2-201ENST00000428233 350 ntBASIC0.37□□□□□ -2.35
CLDN6P56747 ELOCP24-201ENST00000456370 334 ntBASIC0.37□□□□□ -2.35
CLDN6P56747 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.37□□□□□ -2.35
CLDN6P56747 AC019235.1-201ENST00000503847 207 ntBASIC0.37□□□□□ -2.35
CLDN6P56747 RN7SKP164-201ENST00000516138 266 ntBASIC0.37□□□□□ -2.35
CLDN6P56747 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.37□□□□□ -2.35
CLDN6P56747 AC018448.1-201ENST00000552843 316 ntBASIC0.37□□□□□ -2.35
CLDN6P56747 NBR2-204ENST00000587322 63 ntBASIC0.37□□□□□ -2.35
CLDN6P56747 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
CLDN6P56747 RNU6-1059P-201ENST00000363752 98 ntBASIC0.36□□□□□ -2.35
CLDN6P56747 MIR136-201ENST00000385207 82 ntBASIC0.36□□□□□ -2.35
CLDN6P56747 RNU6-332P-201ENST00000391193 108 ntBASIC0.36□□□□□ -2.35
CLDN6P56747 SNORD111-201ENST00000408139 94 ntBASIC0.36□□□□□ -2.35
CLDN6P56747 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.36□□□□□ -2.35
CLDN6P56747 AC074133.1-201ENST00000515696 183 ntBASIC0.36□□□□□ -2.35
CLDN6P56747 SNORA62.5-201ENST00000516634 120 ntBASIC0.36□□□□□ -2.35
CLDN6P56747 SNORA18.7-201ENST00000516910 131 ntBASIC0.36□□□□□ -2.35
CLDN6P56747 RNU6-273P-201ENST00000516937 96 ntBASIC0.36□□□□□ -2.35
CLDN6P56747 AP003327.1-201ENST00000529684 127 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 291.8 ms