Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC022616.4-201ENST00000522985 181 ntBASIC1.04□□□□□ -2.24
LIM2P55344 AC023442.1-201ENST00000531247 422 ntBASIC1.04□□□□□ -2.24
LIM2P55344 MIR4801-201ENST00000582704 82 ntBASIC1.04□□□□□ -2.24
LIM2P55344 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.04□□□□□ -2.24
LIM2P55344 AC005176.2-201ENST00000596933 147 ntBASIC1.04□□□□□ -2.24
LIM2P55344 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.04□□□□□ -2.24
LIM2P55344 7SK.8-201ENST00000612110 250 ntBASIC1.04□□□□□ -2.24
LIM2P55344 7SK.11-201ENST00000615477 250 ntBASIC1.04□□□□□ -2.24
LIM2P55344 AC010205.1-201ENST00000616668 449 ntBASIC1.04□□□□□ -2.24
LIM2P55344 7SK.13-201ENST00000622040 250 ntBASIC1.04□□□□□ -2.24
LIM2P55344 AC091925.1-201ENST00000623204 462 ntBASIC1.04□□□□□ -2.24
LIM2P55344 Y_RNA.267-201ENST00000364679 109 ntBASIC1.03□□□□□ -2.24
LIM2P55344 RNU1-115P-201ENST00000365329 160 ntBASIC1.03□□□□□ -2.24
LIM2P55344 SNORA2.2-201ENST00000365473 135 ntBASIC1.03□□□□□ -2.24
LIM2P55344 MIR150-201ENST00000385048 84 ntBASIC1.03□□□□□ -2.24
LIM2P55344 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.03□□□□□ -2.24
LIM2P55344 AL390729.2-201ENST00000416137 156 ntBASIC1.03□□□□□ -2.24
LIM2P55344 MRPS18CP6-201ENST00000423587 223 ntBASIC1.03□□□□□ -2.24
LIM2P55344 AC236972.2-201ENST00000434979 310 ntBASIC1.03□□□□□ -2.24
LIM2P55344 SNORD19B-201ENST00000459623 84 ntBASIC1.03□□□□□ -2.24
LIM2P55344 AL049830.1-201ENST00000468034 425 ntBASIC1.03□□□□□ -2.24
LIM2P55344 AC092991.1-201ENST00000477176 376 ntBASIC1.03□□□□□ -2.24
LIM2P55344 AC091951.2-201ENST00000500762 203 ntBASIC1.03□□□□□ -2.24
LIM2P55344 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.03□□□□□ -2.24
LIM2P55344 RNU6-875P-201ENST00000516488 106 ntBASIC1.03□□□□□ -2.24
LIM2P55344 RNU6-1096P-201ENST00000517089 102 ntBASIC1.03□□□□□ -2.24
LIM2P55344 SNORD116.3-201ENST00000517176 78 ntBASIC1.03□□□□□ -2.24
LIM2P55344 AC019288.1-201ENST00000557918 224 ntBASIC1.03□□□□□ -2.24
LIM2P55344 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
LIM2P55344 AL357312.1-201ENST00000603879 298 ntBASIC1.03□□□□□ -2.24
LIM2P55344 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.03□□□□□ -2.24
LIM2P55344 GHRLOS.1-201ENST00000610995 70 ntBASIC1.03□□□□□ -2.24
LIM2P55344 AC091895.1-201ENST00000624494 256 ntBASIC1.03□□□□□ -2.24
LIM2P55344 AC027279.3-201ENST00000625055 122 ntBASIC1.03□□□□□ -2.24
LIM2P55344 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
LIM2P55344 SNORA70.7-201ENST00000384159 133 ntBASIC1.02□□□□□ -2.25
LIM2P55344 Y_RNA.463-201ENST00000384271 102 ntBASIC1.02□□□□□ -2.25
LIM2P55344 MIR618-201ENST00000385287 98 ntBASIC1.02□□□□□ -2.25
LIM2P55344 AL031003.1-201ENST00000404229 172 ntBASIC1.02□□□□□ -2.25
LIM2P55344 RNU2-61P-201ENST00000411069 191 ntBASIC1.02□□□□□ -2.25
LIM2P55344 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.02□□□□□ -2.25
LIM2P55344 MTND5P20-201ENST00000448677 143 ntBASIC1.02□□□□□ -2.25
LIM2P55344 RNU6-699P-201ENST00000517081 110 ntBASIC1.02□□□□□ -2.25
LIM2P55344 MTND4LP32-201ENST00000636111 270 ntBASIC1.02□□□□□ -2.25
LIM2P55344 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.02□□□□□ -2.25
LIM2P55344 MIRLET7C-201ENST00000362160 84 ntBASIC1.01□□□□□ -2.25
LIM2P55344 RNU6-1115P-201ENST00000362490 106 ntBASIC1.01□□□□□ -2.25
LIM2P55344 RNU6-833P-201ENST00000363486 107 ntBASIC1.01□□□□□ -2.25
LIM2P55344 U8.5-201ENST00000364528 136 ntBASIC1.01□□□□□ -2.25
LIM2P55344 Y_RNA.252-201ENST00000364556 101 ntBASIC1.01□□□□□ -2.25
LIM2P55344 Y_RNA.303-201ENST00000364998 94 ntBASIC1.01□□□□□ -2.25
LIM2P55344 Y_RNA.462-201ENST00000384268 102 ntBASIC1.01□□□□□ -2.25
LIM2P55344 U8.16-201ENST00000391279 133 ntBASIC1.01□□□□□ -2.25
LIM2P55344 AL451046.2-201ENST00000403074 277 ntBASIC1.01□□□□□ -2.25
LIM2P55344 RNU6-1304P-201ENST00000411374 106 ntBASIC1.01□□□□□ -2.25
LIM2P55344 CALM2P4-201ENST00000430810 426 ntBASIC1.01□□□□□ -2.25
LIM2P55344 Y_RNA.632-201ENST00000459189 102 ntBASIC1.01□□□□□ -2.25
LIM2P55344 AC087343.1-201ENST00000477341 475 ntBASIC1.01□□□□□ -2.25
LIM2P55344 RNU6-976P-201ENST00000516086 111 ntBASIC1.01□□□□□ -2.25
LIM2P55344 RNU6-1337P-201ENST00000516525 95 ntBASIC1.01□□□□□ -2.25
LIM2P55344 RNU6-1291P-201ENST00000516591 104 ntBASIC1.01□□□□□ -2.25
LIM2P55344 AL355375.2-201ENST00000574825 175 ntBASIC1.01□□□□□ -2.25
LIM2P55344 MIR4659A-201ENST00000580269 81 ntBASIC1.01□□□□□ -2.25
LIM2P55344 MIR4423-201ENST00000580922 80 ntBASIC1.01□□□□□ -2.25
LIM2P55344 AC022441.3-201ENST00000605737 136 ntBASIC1.01□□□□□ -2.25
LIM2P55344 MIR4272-201ENST00000635924 64 ntBASIC1.01□□□□□ -2.25
LIM2P55344 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.01□□□□□ -2.25
LIM2P55344 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
LIM2P55344 Y_RNA.101-201ENST00000363154 102 ntBASIC1□□□□□ -2.25
LIM2P55344 RNU6-626P-201ENST00000363354 107 ntBASIC1□□□□□ -2.25
LIM2P55344 Y_RNA.146-201ENST00000363549 102 ntBASIC1□□□□□ -2.25
LIM2P55344 SNORA25.8-201ENST00000364831 128 ntBASIC1□□□□□ -2.25
LIM2P55344 RNU6-20P-201ENST00000384106 107 ntBASIC1□□□□□ -2.25
LIM2P55344 Y_RNA.526-201ENST00000384572 110 ntBASIC1□□□□□ -2.25
LIM2P55344 RNU6-1105P-201ENST00000384774 107 ntBASIC1□□□□□ -2.25
LIM2P55344 RNU6-710P-201ENST00000410424 105 ntBASIC1□□□□□ -2.25
LIM2P55344 RNU6-1054P-201ENST00000411293 104 ntBASIC1□□□□□ -2.25
LIM2P55344 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1□□□□□ -2.25
LIM2P55344 RPS29P28-201ENST00000446439 141 ntBASIC1□□□□□ -2.25
LIM2P55344 CHEK2P4-201ENST00000450340 246 ntBASIC1□□□□□ -2.25
LIM2P55344 RNU7-169P-201ENST00000459456 61 ntBASIC1□□□□□ -2.25
LIM2P55344 CYCTP-201ENST00000504253 315 ntBASIC1□□□□□ -2.25
LIM2P55344 Y_RNA.702-201ENST00000516843 96 ntBASIC1□□□□□ -2.25
LIM2P55344 Y_RNA.713-201ENST00000517013 96 ntBASIC1□□□□□ -2.25
LIM2P55344 RNU6-165P-201ENST00000517170 99 ntBASIC1□□□□□ -2.25
LIM2P55344 RN7SKP295-201ENST00000517264 153 ntBASIC1□□□□□ -2.25
LIM2P55344 AC055872.1-201ENST00000570978 278 ntBASIC1□□□□□ -2.25
LIM2P55344 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1□□□□□ -2.25
LIM2P55344 MIR4762-201ENST00000585261 75 ntBASIC1□□□□□ -2.25
LIM2P55344 SNORD114-21-201ENST00000606412 72 ntBASIC1□□□□□ -2.25
LIM2P55344 U6.92-201ENST00000636464 89 ntBASIC1□□□□□ -2.25
LIM2P55344 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
LIM2P55344 Y_RNA.39-201ENST00000362620 98 ntBASIC0.99□□□□□ -2.25
LIM2P55344 RNU6-926P-201ENST00000384075 107 ntBASIC0.99□□□□□ -2.25
LIM2P55344 Y_RNA.446-201ENST00000384178 104 ntBASIC0.99□□□□□ -2.25
LIM2P55344 MT-TD-201ENST00000387419 68 ntBASIC0.99□□□□□ -2.25
LIM2P55344 RNU6-1199P-201ENST00000411249 104 ntBASIC0.99□□□□□ -2.25
LIM2P55344 AL354751.2-201ENST00000415471 210 ntBASIC0.99□□□□□ -2.25
LIM2P55344 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.99□□□□□ -2.25
LIM2P55344 COX6CP14-201ENST00000469580 174 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms