Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC139792.2-201ENST00000624218 587 ntBASIC0.82□□□□□ -2.28
CDH4P55283 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.81□□□□□ -2.28
CDH4P55283 AC008163.1-202ENST00000636004 2889 ntBASIC0.81□□□□□ -2.28
CDH4P55283 RNU6-845P-201ENST00000362578 103 ntBASIC0.81□□□□□ -2.28
CDH4P55283 Y_RNA.361-201ENST00000365515 120 ntBASIC0.81□□□□□ -2.28
CDH4P55283 MIR873-201ENST00000401120 77 ntBASIC0.81□□□□□ -2.28
CDH4P55283 AC114482.1-201ENST00000418010 247 ntBASIC0.81□□□□□ -2.28
CDH4P55283 PDCL2P1-201ENST00000419302 352 ntBASIC0.81□□□□□ -2.28
CDH4P55283 AC104332.1-201ENST00000440471 797 ntBASIC0.81□□□□□ -2.28
CDH4P55283 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.81□□□□□ -2.28
CDH4P55283 AC022493.2-201ENST00000506122 481 ntBASIC0.81□□□□□ -2.28
CDH4P55283 RNU6-120P-201ENST00000516077 103 ntBASIC0.81□□□□□ -2.28
CDH4P55283 RNU6-1291P-201ENST00000516591 104 ntBASIC0.81□□□□□ -2.28
CDH4P55283 RNU7-28P-201ENST00000516759 62 ntBASIC0.81□□□□□ -2.28
CDH4P55283 AC090142.3-201ENST00000519012 385 ntBASIC0.81□□□□□ -2.28
CDH4P55283 AP002004.2-201ENST00000531656 154 ntBASIC0.81□□□□□ -2.28
CDH4P55283 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CDH4P55283 PISRT1.1-201ENST00000616930 107 ntBASIC0.81□□□□□ -2.28
CDH4P55283 AC087588.2-201ENST00000617667 426 ntBASIC0.81□□□□□ -2.28
CDH4P55283 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.81□□□□□ -2.28
CDH4P55283 AC127459.3-201ENST00000624328 466 ntBASIC0.81□□□□□ -2.28
CDH4P55283 AL669831.3-213ENST00000636676 183 ntBASIC0.81□□□□□ -2.28
CDH4P55283 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
CDH4P55283 Y_RNA.269-201ENST00000364685 89 ntBASIC0.8□□□□□ -2.28
CDH4P55283 RNU6-99P-201ENST00000364721 107 ntBASIC0.8□□□□□ -2.28
CDH4P55283 RNU6-376P-201ENST00000384731 106 ntBASIC0.8□□□□□ -2.28
CDH4P55283 MIR200A-201ENST00000384875 90 ntBASIC0.8□□□□□ -2.28
CDH4P55283 MIR562-201ENST00000384894 95 ntBASIC0.8□□□□□ -2.28
CDH4P55283 MIR518E-201ENST00000385252 88 ntBASIC0.8□□□□□ -2.28
CDH4P55283 MIR942-201ENST00000401111 86 ntBASIC0.8□□□□□ -2.28
CDH4P55283 SNORD12B-201ENST00000410433 91 ntBASIC0.8□□□□□ -2.28
CDH4P55283 RNA5SP475-201ENST00000410568 110 ntBASIC0.8□□□□□ -2.28
CDH4P55283 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.8□□□□□ -2.28
CDH4P55283 Z98949.2-201ENST00000440996 144 ntBASIC0.8□□□□□ -2.28
CDH4P55283 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.8□□□□□ -2.28
CDH4P55283 MTND4P17-201ENST00000470444 350 ntBASIC0.8□□□□□ -2.28
CDH4P55283 AC055872.1-201ENST00000570978 278 ntBASIC0.8□□□□□ -2.28
CDH4P55283 AL117336.2-201ENST00000602435 335 ntBASIC0.8□□□□□ -2.28
CDH4P55283 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
CDH4P55283 AL078603.1-201ENST00000603824 313 ntBASIC0.8□□□□□ -2.28
CDH4P55283 MIR6788-201ENST00000618842 66 ntBASIC0.8□□□□□ -2.28
CDH4P55283 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.8□□□□□ -2.28
CDH4P55283 CASC19-280ENST00000642102 1351 ntBASIC0.8□□□□□ -2.28
CDH4P55283 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.8□□□□□ -2.28
CDH4P55283 SNORD114-7-201ENST00000362520 77 ntBASIC0.79□□□□□ -2.28
CDH4P55283 Y_RNA.166-201ENST00000363730 102 ntBASIC0.79□□□□□ -2.28
CDH4P55283 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
CDH4P55283 RNA5SP482-201ENST00000391269 118 ntBASIC0.79□□□□□ -2.28
CDH4P55283 RNU2-64P-201ENST00000411315 191 ntBASIC0.79□□□□□ -2.28
CDH4P55283 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.79□□□□□ -2.28
CDH4P55283 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
CDH4P55283 RNU6-1278P-201ENST00000516130 107 ntBASIC0.79□□□□□ -2.28
CDH4P55283 RNU6-63P-201ENST00000516690 95 ntBASIC0.79□□□□□ -2.28
CDH4P55283 MTND4LP26-201ENST00000518144 282 ntBASIC0.79□□□□□ -2.28
CDH4P55283 AC011604.1-201ENST00000545978 196 ntBASIC0.79□□□□□ -2.28
CDH4P55283 CYP3A137P-201ENST00000562436 69 ntBASIC0.79□□□□□ -2.28
CDH4P55283 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
CDH4P55283 Y_RNA.122-201ENST00000363331 96 ntBASIC0.78□□□□□ -2.28
CDH4P55283 Y_RNA.160-201ENST00000363677 92 ntBASIC0.78□□□□□ -2.28
CDH4P55283 RNU6-961P-201ENST00000363893 105 ntBASIC0.78□□□□□ -2.28
CDH4P55283 SNORD115-30-201ENST00000364117 82 ntBASIC0.78□□□□□ -2.28
CDH4P55283 RNU4-41P-201ENST00000364426 143 ntBASIC0.78□□□□□ -2.28
CDH4P55283 RNY1P14-201ENST00000384426 108 ntBASIC0.78□□□□□ -2.28
CDH4P55283 Y_RNA.508-201ENST00000384502 114 ntBASIC0.78□□□□□ -2.28
CDH4P55283 RNU6-136P-201ENST00000384663 107 ntBASIC0.78□□□□□ -2.28
CDH4P55283 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
CDH4P55283 MIR2053-201ENST00000459295 91 ntBASIC0.78□□□□□ -2.28
CDH4P55283 AL049830.1-201ENST00000468034 425 ntBASIC0.78□□□□□ -2.28
CDH4P55283 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.78□□□□□ -2.28
CDH4P55283 RNU6-197P-201ENST00000516680 100 ntBASIC0.78□□□□□ -2.28
CDH4P55283 RNU6-307P-201ENST00000516743 106 ntBASIC0.78□□□□□ -2.28
CDH4P55283 RNU6-1096P-201ENST00000517089 102 ntBASIC0.78□□□□□ -2.28
CDH4P55283 MIR2355-201ENST00000517199 87 ntBASIC0.78□□□□□ -2.28
CDH4P55283 RNU2-12P-201ENST00000517216 168 ntBASIC0.78□□□□□ -2.28
CDH4P55283 RNU6-1116P-201ENST00000517269 99 ntBASIC0.78□□□□□ -2.28
CDH4P55283 AL358944.1-201ENST00000528537 144 ntBASIC0.78□□□□□ -2.28
CDH4P55283 SNORA4-201ENST00000584302 138 ntBASIC0.78□□□□□ -2.28
CDH4P55283 AC098679.4-201ENST00000624241 654 ntBASIC0.78□□□□□ -2.28
CDH4P55283 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.77□□□□□ -2.29
CDH4P55283 SNORD81.2-201ENST00000365153 76 ntBASIC0.77□□□□□ -2.29
CDH4P55283 RNU6-969P-201ENST00000383900 105 ntBASIC0.77□□□□□ -2.29
CDH4P55283 RNU6-310P-201ENST00000384655 107 ntBASIC0.77□□□□□ -2.29
CDH4P55283 Y_RNA.577-201ENST00000384794 101 ntBASIC0.77□□□□□ -2.29
CDH4P55283 MIR520G-201ENST00000385064 90 ntBASIC0.77□□□□□ -2.29
CDH4P55283 MT-TL1-201ENST00000386347 75 ntBASIC0.77□□□□□ -2.29
CDH4P55283 MIR548J-201ENST00000408833 112 ntBASIC0.77□□□□□ -2.29
CDH4P55283 Y_RNA.592-201ENST00000410274 109 ntBASIC0.77□□□□□ -2.29
CDH4P55283 RNA5SP511-201ENST00000410487 115 ntBASIC0.77□□□□□ -2.29
CDH4P55283 Y_RNA.646-201ENST00000410980 101 ntBASIC0.77□□□□□ -2.29
CDH4P55283 RPS3AP1-201ENST00000413190 320 ntBASIC0.77□□□□□ -2.29
CDH4P55283 MTND4P28-201ENST00000426217 387 ntBASIC0.77□□□□□ -2.29
CDH4P55283 RPL23AP50-201ENST00000434149 455 ntBASIC0.77□□□□□ -2.29
CDH4P55283 SUMO1P2-201ENST00000452524 304 ntBASIC0.77□□□□□ -2.29
CDH4P55283 LINC01399-202ENST00000458450 244 ntBASIC0.77□□□□□ -2.29
CDH4P55283 RPS26P48-201ENST00000491713 339 ntBASIC0.77□□□□□ -2.29
CDH4P55283 RNU6-408P-201ENST00000515910 100 ntBASIC0.77□□□□□ -2.29
CDH4P55283 RNA5SP220-201ENST00000516298 104 ntBASIC0.77□□□□□ -2.29
CDH4P55283 MIR151B-201ENST00000584249 96 ntBASIC0.77□□□□□ -2.29
CDH4P55283 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
CDH4P55283 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms