Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 RNVU1-2-201ENST00000516326 135 ntBASIC2.2□□□□□ -2.06
ITGA8P53708 RNU7-172P-201ENST00000517125 64 ntBASIC2.2□□□□□ -2.06
ITGA8P53708 RNU6-111P-201ENST00000517179 105 ntBASIC2.2□□□□□ -2.06
ITGA8P53708 AC027419.1-201ENST00000522976 328 ntBASIC2.2□□□□□ -2.06
ITGA8P53708 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.2□□□□□ -2.06
ITGA8P53708 AC141273.2-201ENST00000618989 130 ntBASIC2.2□□□□□ -2.06
ITGA8P53708 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.2□□□□□ -2.06
ITGA8P53708 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
ITGA8P53708 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ITGA8P53708 RNA5SP276-201ENST00000362580 94 ntBASIC2.19□□□□□ -2.06
ITGA8P53708 RNU6-662P-201ENST00000384253 104 ntBASIC2.19□□□□□ -2.06
ITGA8P53708 RNU6-763P-201ENST00000390865 106 ntBASIC2.19□□□□□ -2.06
ITGA8P53708 RNA5SP467-201ENST00000391274 118 ntBASIC2.19□□□□□ -2.06
ITGA8P53708 SNORA3.2-201ENST00000408221 125 ntBASIC2.19□□□□□ -2.06
ITGA8P53708 RNU6-847P-201ENST00000411115 108 ntBASIC2.19□□□□□ -2.06
ITGA8P53708 AC104332.1-201ENST00000440471 797 ntBASIC2.19□□□□□ -2.06
ITGA8P53708 AC025033.1-201ENST00000463883 194 ntBASIC2.19□□□□□ -2.06
ITGA8P53708 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.19□□□□□ -2.06
ITGA8P53708 RNU4-71P-201ENST00000516258 113 ntBASIC2.19□□□□□ -2.06
ITGA8P53708 RNU6-794P-201ENST00000517261 64 ntBASIC2.19□□□□□ -2.06
ITGA8P53708 AC015720.1-201ENST00000565251 277 ntBASIC2.19□□□□□ -2.06
ITGA8P53708 AC069114.2-201ENST00000604699 304 ntBASIC2.19□□□□□ -2.06
ITGA8P53708 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.19□□□□□ -2.06
ITGA8P53708 AC245060.5-201ENST00000610778 3293 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 Y_RNA.76-201ENST00000362931 109 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 RNA5SP138-201ENST00000365098 114 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.18□□□□□ -2.06
ITGA8P53708 SNORA8-201ENST00000384574 139 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 RNU6-651P-201ENST00000411040 105 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 RNU2-14P-201ENST00000411053 191 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 COX6CP14-201ENST00000469580 174 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 AC079804.2-201ENST00000490376 200 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 RNU1-40P-201ENST00000516816 164 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 RNU1-97P-201ENST00000516872 164 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 SUB1P4-201ENST00000566062 339 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 MIR5094-201ENST00000578766 85 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 AC091178.2-201ENST00000584401 117 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 AC009779.6-201ENST00000603972 165 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 AL008718.3-201ENST00000610217 321 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 AL773524.1-201ENST00000614065 229 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 MIR6132-201ENST00000622083 109 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 snoU18.1-201ENST00000629629 71 ntBASIC2.18□□□□□ -2.06
ITGA8P53708 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
ITGA8P53708 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
ITGA8P53708 ZNF658B-202ENST00000615961 3375 ntBASIC2.17□□□□□ -2.06
ITGA8P53708 AL596028.1-201ENST00000326971 197 ntBASIC2.17□□□□□ -2.06
ITGA8P53708 Y_RNA.117-201ENST00000363294 101 ntBASIC2.17□□□□□ -2.06
ITGA8P53708 SNORD27-201ENST00000363981 72 ntBASIC2.17□□□□□ -2.06
ITGA8P53708 RNU6-1019P-201ENST00000364424 107 ntBASIC2.17□□□□□ -2.06
ITGA8P53708 SNORA70B-201ENST00000384210 135 ntBASIC2.17□□□□□ -2.06
ITGA8P53708 RNU11-5P-201ENST00000391216 129 ntBASIC2.17□□□□□ -2.06
ITGA8P53708 RNA5SP511-201ENST00000410487 115 ntBASIC2.17□□□□□ -2.06
ITGA8P53708 AL139156.1-201ENST00000412785 841 ntBASIC2.17□□□□□ -2.06
ITGA8P53708 AL135786.1-201ENST00000415892 214 ntBASIC2.17□□□□□ -2.06
ITGA8P53708 Z98742.3-201ENST00000418637 326 ntBASIC2.17□□□□□ -2.06
ITGA8P53708 AC245047.4-201ENST00000433189 144 ntBASIC2.17□□□□□ -2.06
ITGA8P53708 AC010409.1-201ENST00000487382 476 ntBASIC2.17□□□□□ -2.06
ITGA8P53708 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.17□□□□□ -2.06
ITGA8P53708 SCARNA16.3-201ENST00000516595 184 ntBASIC2.17□□□□□ -2.06
ITGA8P53708 AC005357.1-201ENST00000588399 301 ntBASIC2.17□□□□□ -2.06
ITGA8P53708 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.17□□□□□ -2.06
ITGA8P53708 AP003357.1-201ENST00000604497 148 ntBASIC2.17□□□□□ -2.06
ITGA8P53708 AC005972.2-201ENST00000604690 348 ntBASIC2.17□□□□□ -2.06
ITGA8P53708 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.17□□□□□ -2.06
ITGA8P53708 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ITGA8P53708 U8.2-201ENST00000363156 134 ntBASIC2.16□□□□□ -2.06
ITGA8P53708 RNU6-338P-201ENST00000383888 105 ntBASIC2.16□□□□□ -2.06
ITGA8P53708 Y_RNA.552-201ENST00000384665 112 ntBASIC2.16□□□□□ -2.06
ITGA8P53708 AL356379.1-201ENST00000414105 126 ntBASIC2.16□□□□□ -2.06
ITGA8P53708 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.16□□□□□ -2.06
ITGA8P53708 AC244636.1-201ENST00000421152 228 ntBASIC2.16□□□□□ -2.06
ITGA8P53708 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.16□□□□□ -2.06
ITGA8P53708 AC069257.2-201ENST00000441819 155 ntBASIC2.16□□□□□ -2.06
ITGA8P53708 RPL23AP6-201ENST00000446637 472 ntBASIC2.16□□□□□ -2.06
ITGA8P53708 RNA5SP233-201ENST00000459153 113 ntBASIC2.16□□□□□ -2.06
ITGA8P53708 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.16□□□□□ -2.06
ITGA8P53708 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.16□□□□□ -2.06
ITGA8P53708 RNU7-115P-201ENST00000516433 55 ntBASIC2.16□□□□□ -2.06
ITGA8P53708 RNU1-142P-201ENST00000516682 145 ntBASIC2.16□□□□□ -2.06
ITGA8P53708 RNU6-63P-201ENST00000516690 95 ntBASIC2.16□□□□□ -2.06
ITGA8P53708 RNU7-116P-201ENST00000516940 62 ntBASIC2.16□□□□□ -2.06
ITGA8P53708 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.16□□□□□ -2.06
ITGA8P53708 AC002984.1-201ENST00000591692 448 ntBASIC2.16□□□□□ -2.06
ITGA8P53708 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.16□□□□□ -2.06
ITGA8P53708 AL442067.1-201ENST00000613261 223 ntBASIC2.16□□□□□ -2.06
ITGA8P53708 AC013791.1-201ENST00000616619 62 ntBASIC2.16□□□□□ -2.06
ITGA8P53708 AC073349.3-201ENST00000617616 186 ntBASIC2.16□□□□□ -2.06
ITGA8P53708 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.16□□□□□ -2.06
ITGA8P53708 AC018630.2-201ENST00000534866 2403 ntBASIC2.15□□□□□ -2.07
ITGA8P53708 Y_RNA.54-201ENST00000362766 105 ntBASIC2.15□□□□□ -2.07
ITGA8P53708 Y_RNA.269-201ENST00000364685 89 ntBASIC2.15□□□□□ -2.07
ITGA8P53708 RNY4P28-201ENST00000365281 93 ntBASIC2.15□□□□□ -2.07
ITGA8P53708 RNU6-211P-201ENST00000384047 107 ntBASIC2.15□□□□□ -2.07
ITGA8P53708 MIR520G-201ENST00000385064 90 ntBASIC2.15□□□□□ -2.07
ITGA8P53708 RNA5SP425-201ENST00000410336 112 ntBASIC2.15□□□□□ -2.07
ITGA8P53708 RNU7-141P-201ENST00000459304 62 ntBASIC2.15□□□□□ -2.07
ITGA8P53708 Y_RNA.638-201ENST00000459374 113 ntBASIC2.15□□□□□ -2.07
ITGA8P53708 RPS27P21-201ENST00000486977 252 ntBASIC2.15□□□□□ -2.07
ITGA8P53708 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms