Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RPS29P30-201ENST00000600975 111 ntBASIC1.5□□□□□ -2.17
LIMK1P53667 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
LIMK1P53667 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LIMK1P53667 Y_RNA.36-201ENST00000362602 112 ntBASIC1.49□□□□□ -2.17
LIMK1P53667 RNU4-13P-201ENST00000364019 141 ntBASIC1.49□□□□□ -2.17
LIMK1P53667 MIR513A1-201ENST00000385138 129 ntBASIC1.49□□□□□ -2.17
LIMK1P53667 MIR320A-201ENST00000385302 82 ntBASIC1.49□□□□□ -2.17
LIMK1P53667 MRPL35P1-201ENST00000404272 572 ntBASIC1.49□□□□□ -2.17
LIMK1P53667 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.49□□□□□ -2.17
LIMK1P53667 SDAD1P3-201ENST00000427380 333 ntBASIC1.49□□□□□ -2.17
LIMK1P53667 AC233266.1-201ENST00000454518 96 ntBASIC1.49□□□□□ -2.17
LIMK1P53667 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.49□□□□□ -2.17
LIMK1P53667 SNORA70.12-201ENST00000516084 153 ntBASIC1.49□□□□□ -2.17
LIMK1P53667 RNU6-976P-201ENST00000516086 111 ntBASIC1.49□□□□□ -2.17
LIMK1P53667 RNU6-1012P-201ENST00000516606 109 ntBASIC1.49□□□□□ -2.17
LIMK1P53667 RNU2-56P-201ENST00000516826 190 ntBASIC1.49□□□□□ -2.17
LIMK1P53667 SUMO2P16-201ENST00000519475 264 ntBASIC1.49□□□□□ -2.17
LIMK1P53667 AL162424.1-201ENST00000602325 221 ntBASIC1.49□□□□□ -2.17
LIMK1P53667 AC242852.1-201ENST00000612151 96 ntBASIC1.49□□□□□ -2.17
LIMK1P53667 AC040896.1-201ENST00000613819 479 ntBASIC1.49□□□□□ -2.17
LIMK1P53667 AC104985.2-201ENST00000620598 500 ntBASIC1.49□□□□□ -2.17
LIMK1P53667 AC244015.1-201ENST00000622301 99 ntBASIC1.49□□□□□ -2.17
LIMK1P53667 AC138305.3-201ENST00000624988 240 ntBASIC1.49□□□□□ -2.17
LIMK1P53667 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
LIMK1P53667 RNU4-79P-201ENST00000362764 141 ntBASIC1.48□□□□□ -2.17
LIMK1P53667 Y_RNA.243-201ENST00000364481 109 ntBASIC1.48□□□□□ -2.17
LIMK1P53667 RNU1-93P-201ENST00000364704 169 ntBASIC1.48□□□□□ -2.17
LIMK1P53667 MIR562-201ENST00000384894 95 ntBASIC1.48□□□□□ -2.17
LIMK1P53667 STAG3L5P-204ENST00000443759 179 ntBASIC1.48□□□□□ -2.17
LIMK1P53667 RNU6-1170P-201ENST00000515974 106 ntBASIC1.48□□□□□ -2.17
LIMK1P53667 AL160236.1-201ENST00000556317 195 ntBASIC1.48□□□□□ -2.17
LIMK1P53667 SNORA28-201ENST00000606769 126 ntBASIC1.48□□□□□ -2.17
LIMK1P53667 AC021506.2-201ENST00000612354 169 ntBASIC1.48□□□□□ -2.17
LIMK1P53667 AC240442.1-201ENST00000616055 283 ntBASIC1.48□□□□□ -2.17
LIMK1P53667 AL138825.1-201ENST00000618587 192 ntBASIC1.48□□□□□ -2.17
LIMK1P53667 U6.92-201ENST00000636464 89 ntBASIC1.48□□□□□ -2.17
LIMK1P53667 MIR26B-201ENST00000362251 77 ntBASIC1.47□□□□□ -2.17
LIMK1P53667 RNU6-1123P-201ENST00000362347 106 ntBASIC1.47□□□□□ -2.17
LIMK1P53667 RNU6-1115P-201ENST00000362490 106 ntBASIC1.47□□□□□ -2.17
LIMK1P53667 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.47□□□□□ -2.17
LIMK1P53667 RNU6-1065P-201ENST00000384513 106 ntBASIC1.47□□□□□ -2.17
LIMK1P53667 MIR150-201ENST00000385048 84 ntBASIC1.47□□□□□ -2.17
LIMK1P53667 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.47□□□□□ -2.17
LIMK1P53667 AL137792.2-201ENST00000443484 235 ntBASIC1.47□□□□□ -2.17
LIMK1P53667 CHEK2P4-201ENST00000450340 246 ntBASIC1.47□□□□□ -2.17
LIMK1P53667 AC091021.1-201ENST00000468051 388 ntBASIC1.47□□□□□ -2.17
LIMK1P53667 RNU6-155P-201ENST00000516347 100 ntBASIC1.47□□□□□ -2.17
LIMK1P53667 AC006157.1-201ENST00000611750 366 ntBASIC1.47□□□□□ -2.17
LIMK1P53667 MIR4272-201ENST00000635924 64 ntBASIC1.47□□□□□ -2.17
LIMK1P53667 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
LIMK1P53667 MIR302D-201ENST00000362275 68 ntBASIC1.46□□□□□ -2.18
LIMK1P53667 MIR96-201ENST00000362288 78 ntBASIC1.46□□□□□ -2.18
LIMK1P53667 Y_RNA.124-201ENST00000363339 93 ntBASIC1.46□□□□□ -2.18
LIMK1P53667 Y_RNA.315-201ENST00000365117 102 ntBASIC1.46□□□□□ -2.18
LIMK1P53667 Y_RNA.431-201ENST00000384086 102 ntBASIC1.46□□□□□ -2.18
LIMK1P53667 MIR1323-201ENST00000408090 73 ntBASIC1.46□□□□□ -2.18
LIMK1P53667 AF228730.4-201ENST00000421457 183 ntBASIC1.46□□□□□ -2.18
LIMK1P53667 AL160004.2-201ENST00000432935 350 ntBASIC1.46□□□□□ -2.18
LIMK1P53667 AC027119.1-201ENST00000440877 241 ntBASIC1.46□□□□□ -2.18
LIMK1P53667 RNU6-1291P-201ENST00000516591 104 ntBASIC1.46□□□□□ -2.18
LIMK1P53667 RNU6-63P-201ENST00000516690 95 ntBASIC1.46□□□□□ -2.18
LIMK1P53667 RNU6-1223P-201ENST00000517124 104 ntBASIC1.46□□□□□ -2.18
LIMK1P53667 RAB11AP2-201ENST00000545905 639 ntBASIC1.46□□□□□ -2.18
LIMK1P53667 AC055872.1-201ENST00000570978 278 ntBASIC1.46□□□□□ -2.18
LIMK1P53667 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.46□□□□□ -2.18
LIMK1P53667 Y_RNA.772-201ENST00000606692 102 ntBASIC1.46□□□□□ -2.18
LIMK1P53667 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.46□□□□□ -2.18
LIMK1P53667 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.46□□□□□ -2.18
LIMK1P53667 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.46□□□□□ -2.18
LIMK1P53667 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
LIMK1P53667 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LIMK1P53667 Y_RNA.101-201ENST00000363154 102 ntBASIC1.45□□□□□ -2.18
LIMK1P53667 Y_RNA.197-201ENST00000364004 102 ntBASIC1.45□□□□□ -2.18
LIMK1P53667 Y_RNA.252-201ENST00000364556 101 ntBASIC1.45□□□□□ -2.18
LIMK1P53667 MIR598-201ENST00000384868 97 ntBASIC1.45□□□□□ -2.18
LIMK1P53667 MIR194-1-201ENST00000384892 85 ntBASIC1.45□□□□□ -2.18
LIMK1P53667 RNU2-54P-201ENST00000410299 190 ntBASIC1.45□□□□□ -2.18
LIMK1P53667 Y_RNA.621-201ENST00000411065 96 ntBASIC1.45□□□□□ -2.18
LIMK1P53667 SNX2P2-201ENST00000424553 323 ntBASIC1.45□□□□□ -2.18
LIMK1P53667 AL135790.2-201ENST00000437701 267 ntBASIC1.45□□□□□ -2.18
LIMK1P53667 PGBD4P5-201ENST00000445958 426 ntBASIC1.45□□□□□ -2.18
LIMK1P53667 AC092991.1-201ENST00000477176 376 ntBASIC1.45□□□□□ -2.18
LIMK1P53667 RNU6-341P-201ENST00000516973 96 ntBASIC1.45□□□□□ -2.18
LIMK1P53667 RNU2-12P-201ENST00000517216 168 ntBASIC1.45□□□□□ -2.18
LIMK1P53667 AC015688.6-201ENST00000577737 104 ntBASIC1.45□□□□□ -2.18
LIMK1P53667 LARP7P1-201ENST00000605576 316 ntBASIC1.45□□□□□ -2.18
LIMK1P53667 AL133255.1-201ENST00000606374 441 ntBASIC1.45□□□□□ -2.18
LIMK1P53667 AC073349.3-201ENST00000617616 186 ntBASIC1.45□□□□□ -2.18
LIMK1P53667 SNORD3E-202ENST00000627253 216 ntBASIC1.45□□□□□ -2.18
LIMK1P53667 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
LIMK1P53667 AP000648.3-201ENST00000623539 4507 ntBASIC1.44□□□□□ -2.18
LIMK1P53667 Y_RNA.80-201ENST00000362996 102 ntBASIC1.44□□□□□ -2.18
LIMK1P53667 Y_RNA.485-201ENST00000384395 102 ntBASIC1.44□□□□□ -2.18
LIMK1P53667 RNU6-505P-201ENST00000384427 107 ntBASIC1.44□□□□□ -2.18
LIMK1P53667 Y_RNA.496-201ENST00000384444 101 ntBASIC1.44□□□□□ -2.18
LIMK1P53667 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.44□□□□□ -2.18
LIMK1P53667 RPL30P7-201ENST00000479312 323 ntBASIC1.44□□□□□ -2.18
LIMK1P53667 MIR5188-201ENST00000583467 113 ntBASIC1.44□□□□□ -2.18
LIMK1P53667 AC005828.6-201ENST00000606610 232 ntBASIC1.44□□□□□ -2.18
LIMK1P53667 AL606534.2-204ENST00000635008 178 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms