Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RNU6-1278P-201ENST00000516130 107 ntBASIC2.21□□□□□ -2.06
COPAP53621 RNA5SP200-201ENST00000516360 103 ntBASIC2.21□□□□□ -2.06
COPAP53621 Y_RNA.680-201ENST00000516441 93 ntBASIC2.21□□□□□ -2.06
COPAP53621 RNU6-1337P-201ENST00000516525 95 ntBASIC2.21□□□□□ -2.06
COPAP53621 RNU1-142P-201ENST00000516682 145 ntBASIC2.21□□□□□ -2.06
COPAP53621 MIR4299-201ENST00000577899 72 ntBASIC2.21□□□□□ -2.06
COPAP53621 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.21□□□□□ -2.06
COPAP53621 AC010900.2-201ENST00000604508 210 ntBASIC2.21□□□□□ -2.06
COPAP53621 AL359075.3-201ENST00000613288 217 ntBASIC2.21□□□□□ -2.06
COPAP53621 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.21□□□□□ -2.06
COPAP53621 U6.73-201ENST00000619194 103 ntBASIC2.21□□□□□ -2.06
COPAP53621 AC009831.4-201ENST00000620744 325 ntBASIC2.21□□□□□ -2.06
COPAP53621 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.2□□□□□ -2.06
COPAP53621 Y_RNA.20-201ENST00000362479 113 ntBASIC2.2□□□□□ -2.06
COPAP53621 RNA5SP276-201ENST00000362580 94 ntBASIC2.2□□□□□ -2.06
COPAP53621 RNU6-740P-201ENST00000364734 105 ntBASIC2.2□□□□□ -2.06
COPAP53621 Y_RNA.456-201ENST00000384232 111 ntBASIC2.2□□□□□ -2.06
COPAP53621 RNU6-662P-201ENST00000384253 104 ntBASIC2.2□□□□□ -2.06
COPAP53621 MIR515-2-201ENST00000384883 83 ntBASIC2.2□□□□□ -2.06
COPAP53621 MIR515-1-201ENST00000384884 83 ntBASIC2.2□□□□□ -2.06
COPAP53621 MIR676-201ENST00000390702 67 ntBASIC2.2□□□□□ -2.06
COPAP53621 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.2□□□□□ -2.06
COPAP53621 HMGN2P19-201ENST00000425149 265 ntBASIC2.2□□□□□ -2.06
COPAP53621 RNVU1-2-201ENST00000516326 135 ntBASIC2.2□□□□□ -2.06
COPAP53621 SCARNA16.3-201ENST00000516595 184 ntBASIC2.2□□□□□ -2.06
COPAP53621 MIR4769-201ENST00000584126 77 ntBASIC2.2□□□□□ -2.06
COPAP53621 AL162424.1-201ENST00000602325 221 ntBASIC2.2□□□□□ -2.06
COPAP53621 AC069114.2-201ENST00000604699 304 ntBASIC2.2□□□□□ -2.06
COPAP53621 AL773524.1-201ENST00000614065 229 ntBASIC2.2□□□□□ -2.06
COPAP53621 U1.36-201ENST00000620684 176 ntBASIC2.2□□□□□ -2.06
COPAP53621 MIR219B-201ENST00000637023 88 ntBASIC2.2□□□□□ -2.06
COPAP53621 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COPAP53621 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
COPAP53621 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
COPAP53621 AL356292.1-201ENST00000283110 373 ntBASIC2.19□□□□□ -2.06
COPAP53621 SNORA33-201ENST00000363664 130 ntBASIC2.19□□□□□ -2.06
COPAP53621 RNU6-379P-201ENST00000363813 104 ntBASIC2.19□□□□□ -2.06
COPAP53621 Y_RNA.368-201ENST00000365547 113 ntBASIC2.19□□□□□ -2.06
COPAP53621 RNU4-52P-201ENST00000384209 138 ntBASIC2.19□□□□□ -2.06
COPAP53621 SNORA48.1-201ENST00000390879 135 ntBASIC2.19□□□□□ -2.06
COPAP53621 Y_RNA.590-201ENST00000410140 107 ntBASIC2.19□□□□□ -2.06
COPAP53621 AL591806.2-201ENST00000433122 173 ntBASIC2.19□□□□□ -2.06
COPAP53621 AC097462.1-201ENST00000514125 324 ntBASIC2.19□□□□□ -2.06
COPAP53621 Y_RNA.679-201ENST00000516416 91 ntBASIC2.19□□□□□ -2.06
COPAP53621 RNU7-172P-201ENST00000517125 64 ntBASIC2.19□□□□□ -2.06
COPAP53621 AC136628.3-201ENST00000521868 290 ntBASIC2.19□□□□□ -2.06
COPAP53621 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.19□□□□□ -2.06
COPAP53621 AP000553.5-201ENST00000641933 54 ntBASIC2.19□□□□□ -2.06
COPAP53621 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COPAP53621 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COPAP53621 RNU1-22P-201ENST00000363334 158 ntBASIC2.18□□□□□ -2.06
COPAP53621 RNU6-1289P-201ENST00000384431 106 ntBASIC2.18□□□□□ -2.06
COPAP53621 SNORA8-201ENST00000384574 139 ntBASIC2.18□□□□□ -2.06
COPAP53621 Y_RNA.552-201ENST00000384665 112 ntBASIC2.18□□□□□ -2.06
COPAP53621 RNU6-376P-201ENST00000384731 106 ntBASIC2.18□□□□□ -2.06
COPAP53621 RNU11-5P-201ENST00000391216 129 ntBASIC2.18□□□□□ -2.06
COPAP53621 RNA5SP212-201ENST00000391223 107 ntBASIC2.18□□□□□ -2.06
COPAP53621 AC244636.1-201ENST00000421152 228 ntBASIC2.18□□□□□ -2.06
COPAP53621 RNU6-717P-201ENST00000459076 104 ntBASIC2.18□□□□□ -2.06
COPAP53621 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.18□□□□□ -2.06
COPAP53621 AC005357.1-201ENST00000588399 301 ntBASIC2.18□□□□□ -2.06
COPAP53621 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.18□□□□□ -2.06
COPAP53621 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.18□□□□□ -2.06
COPAP53621 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
COPAP53621 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
COPAP53621 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
COPAP53621 RNU6-1272P-201ENST00000362776 107 ntBASIC2.17□□□□□ -2.06
COPAP53621 Y_RNA.65-201ENST00000362846 100 ntBASIC2.17□□□□□ -2.06
COPAP53621 Y_RNA.217-201ENST00000364214 105 ntBASIC2.17□□□□□ -2.06
COPAP53621 RNU6-847P-201ENST00000411115 108 ntBASIC2.17□□□□□ -2.06
COPAP53621 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.17□□□□□ -2.06
COPAP53621 EBAG9P1-201ENST00000418955 543 ntBASIC2.17□□□□□ -2.06
COPAP53621 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
COPAP53621 Y_RNA.641-201ENST00000459414 105 ntBASIC2.17□□□□□ -2.06
COPAP53621 RNU7-99P-201ENST00000516271 62 ntBASIC2.17□□□□□ -2.06
COPAP53621 RNU6-388P-201ENST00000517012 105 ntBASIC2.17□□□□□ -2.06
COPAP53621 RNU6-389P-201ENST00000517048 105 ntBASIC2.17□□□□□ -2.06
COPAP53621 AC024995.1-201ENST00000523014 93 ntBASIC2.17□□□□□ -2.06
COPAP53621 MIR6132-201ENST00000622083 109 ntBASIC2.17□□□□□ -2.06
COPAP53621 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
COPAP53621 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
COPAP53621 Y_RNA.117-201ENST00000363294 101 ntBASIC2.16□□□□□ -2.06
COPAP53621 RNU4-13P-201ENST00000364019 141 ntBASIC2.16□□□□□ -2.06
COPAP53621 RNU6-1019P-201ENST00000364424 107 ntBASIC2.16□□□□□ -2.06
COPAP53621 Y_RNA.310-201ENST00000365063 113 ntBASIC2.16□□□□□ -2.06
COPAP53621 BTF3P11-201ENST00000426582 477 ntBASIC2.16□□□□□ -2.06
COPAP53621 HSPE1P21-201ENST00000438283 308 ntBASIC2.16□□□□□ -2.06
COPAP53621 RPS20P10-201ENST00000451209 253 ntBASIC2.16□□□□□ -2.06
COPAP53621 RPL23AP42-201ENST00000471152 471 ntBASIC2.16□□□□□ -2.06
COPAP53621 RNU4-71P-201ENST00000516258 113 ntBASIC2.16□□□□□ -2.06
COPAP53621 RNU6-111P-201ENST00000517179 105 ntBASIC2.16□□□□□ -2.06
COPAP53621 AC015712.3-201ENST00000559380 164 ntBASIC2.16□□□□□ -2.06
COPAP53621 DEFB122-202ENST00000569013 197 ntBASIC2.16□□□□□ -2.06
COPAP53621 AC073413.2-201ENST00000604332 360 ntBASIC2.16□□□□□ -2.06
COPAP53621 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.16□□□□□ -2.06
COPAP53621 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
COPAP53621 Y_RNA.82-201ENST00000363000 102 ntBASIC2.15□□□□□ -2.07
COPAP53621 Y_RNA.92-201ENST00000363043 102 ntBASIC2.15□□□□□ -2.07
COPAP53621 Y_RNA.235-201ENST00000364412 102 ntBASIC2.15□□□□□ -2.07
COPAP53621 Y_RNA.306-201ENST00000365015 102 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms