Protein–RNA interactions for Protein: P53420

COL4A4, Collagen alpha-4(IV) chain, humanhuman

Predicted RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4P53420 Z82195.2-201ENST00000612348 18351 ntBASIC1.49□□□□□ -2.17
COL4A4P53420 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.49□□□□□ -2.17
COL4A4P53420 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.49□□□□□ -2.17
COL4A4P53420 Y_RNA.75-201ENST00000362927 97 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 RNU6-799P-201ENST00000363567 107 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 Y_RNA.179-201ENST00000363844 90 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 RNU6-1080P-201ENST00000383982 107 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 RNU6-1289P-201ENST00000384431 106 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 Y_RNA.568-201ENST00000384742 113 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 RNU6-131P-201ENST00000391144 107 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 RNA5SP390-201ENST00000410191 113 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 RNU6-1077P-201ENST00000410506 102 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A4P53420 AC009237.7-201ENST00000447357 229 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 AC007215.1-201ENST00000464893 276 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 RPL30P12-201ENST00000474666 353 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 RPL31P41-201ENST00000477967 372 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.48□□□□□ -2.17
COL4A4P53420 HMGB1P22-201ENST00000505315 124 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 RNU6-436P-201ENST00000516171 114 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 AP004371.1-201ENST00000525240 214 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 AC021231.3-201ENST00000558497 370 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 MIR5571-201ENST00000577998 113 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 AC010999.1-201ENST00000611856 324 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 MIR6840-201ENST00000611937 71 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 AC008133.2-201ENST00000624540 351 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 Y_RNA.101-201ENST00000363154 102 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 RNU6-873P-201ENST00000363833 107 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 SNORA72.2-201ENST00000365028 127 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 RNU6-245P-201ENST00000384020 107 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 RNU6-211P-201ENST00000384047 107 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 SNORA70.7-201ENST00000384159 133 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 RNU6-80P-201ENST00000384195 107 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A4P53420 AL162725.1-201ENST00000435405 301 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 AC005002.2-201ENST00000438228 269 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A4P53420 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A4P53420 AC012308.1-201ENST00000451232 178 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A4P53420 RPL23AP3-201ENST00000453844 468 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 AC016632.1-201ENST00000503994 196 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.48□□□□□ -2.17
COL4A4P53420 RNU6-1219P-201ENST00000516143 112 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 RNA5SP395-201ENST00000516567 118 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 RNU6-1234P-201ENST00000516877 103 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 AC005176.2-201ENST00000596933 147 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 AL008718.3-201ENST00000610217 321 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 AL138880.2-201ENST00000616214 239 ntBASIC1.48□□□□□ -2.17
COL4A4P53420 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
COL4A4P53420 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
COL4A4P53420 RNA5SP361-201ENST00000362686 118 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 Y_RNA.81-201ENST00000362997 102 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 RNA5SP457-201ENST00000363657 124 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 RNU4-84P-201ENST00000364200 139 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 Y_RNA.217-201ENST00000364214 105 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 SNORD56.5-201ENST00000364281 72 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 RNU6-1325P-201ENST00000364905 105 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 RNU6-968P-201ENST00000384076 107 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 RNU6-1310P-201ENST00000384153 107 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 Y_RNA.498-201ENST00000384460 102 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 RNU6-1154P-201ENST00000391001 104 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.47□□□□□ -2.17
COL4A4P53420 MIR888-201ENST00000401186 77 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 Y_RNA.597-201ENST00000410463 100 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 GPM6BP3-201ENST00000442797 145 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.47□□□□□ -2.17
COL4A4P53420 Y_RNA.641-201ENST00000459414 105 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 AC091021.1-201ENST00000468051 388 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 AC010285.1-201ENST00000470580 392 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.47□□□□□ -2.17
COL4A4P53420 RNU6-581P-201ENST00000516214 105 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 RNU2-44P-201ENST00000516795 194 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.47□□□□□ -2.17
COL4A4P53420 NACAP3-201ENST00000552100 481 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.47□□□□□ -2.17
COL4A4P53420 MIR3684-201ENST00000579779 74 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 MIR4431-201ENST00000579990 94 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 AL138963.2-201ENST00000605137 226 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 AL357075.2-201ENST00000614906 189 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 AL365265.1-201ENST00000621045 234 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 AC091895.1-201ENST00000624494 256 ntBASIC1.47□□□□□ -2.17
COL4A4P53420 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.47□□□□□ -2.17
COL4A4P53420 Y_RNA.71-201ENST00000362892 104 ntBASIC1.46□□□□□ -2.18
COL4A4P53420 SNORD56.1-201ENST00000362913 68 ntBASIC1.46□□□□□ -2.18
COL4A4P53420 RNA5SP139-201ENST00000364340 117 ntBASIC1.46□□□□□ -2.18
COL4A4P53420 RNU6-818P-201ENST00000364837 108 ntBASIC1.46□□□□□ -2.18
COL4A4P53420 Y_RNA.319-201ENST00000365138 92 ntBASIC1.46□□□□□ -2.18
COL4A4P53420 MIR487A-201ENST00000385009 80 ntBASIC1.46□□□□□ -2.18
COL4A4P53420 RNU2-54P-201ENST00000410299 190 ntBASIC1.46□□□□□ -2.18
COL4A4P53420 RNU6-735P-201ENST00000410612 107 ntBASIC1.46□□□□□ -2.18
COL4A4P53420 AC244670.1-201ENST00000436879 112 ntBASIC1.46□□□□□ -2.18
COL4A4P53420 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.46□□□□□ -2.18
COL4A4P53420 AC091874.1-201ENST00000511402 339 ntBASIC1.46□□□□□ -2.18
COL4A4P53420 RNU5F-2P-201ENST00000516066 82 ntBASIC1.46□□□□□ -2.18
COL4A4P53420 RNU6-567P-201ENST00000516746 107 ntBASIC1.46□□□□□ -2.18
COL4A4P53420 SNORA31.23-201ENST00000517219 133 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 227.4 ms