Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 SNORA26.7-201ENST00000391288 122 ntBASIC2.54□□□□□ -2
HMGA2P52926 AL451046.2-201ENST00000403074 277 ntBASIC2.54□□□□□ -2
HMGA2P52926 AC097462.1-201ENST00000514125 324 ntBASIC2.54□□□□□ -2
HMGA2P52926 RNA5SP20-201ENST00000515976 84 ntBASIC2.54□□□□□ -2
HMGA2P52926 RNU6-795P-201ENST00000516323 103 ntBASIC2.54□□□□□ -2
HMGA2P52926 RNU6-826P-201ENST00000516827 104 ntBASIC2.54□□□□□ -2
HMGA2P52926 AC019288.1-201ENST00000557918 224 ntBASIC2.54□□□□□ -2
HMGA2P52926 AC034105.4-201ENST00000568304 277 ntBASIC2.54□□□□□ -2
HMGA2P52926 AC069200.1-201ENST00000609511 323 ntBASIC2.54□□□□□ -2
HMGA2P52926 XIST_intron.1-201ENST00000619444 68 ntBASIC2.54□□□□□ -2
HMGA2P52926 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HMGA2P52926 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.54□□□□□ -2
HMGA2P52926 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
HMGA2P52926 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.53□□□□□ -2
HMGA2P52926 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
HMGA2P52926 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.53□□□□□ -2
HMGA2P52926 RNU6-349P-201ENST00000362402 107 ntBASIC2.53□□□□□ -2
HMGA2P52926 SNORD115-13-201ENST00000363358 82 ntBASIC2.53□□□□□ -2
HMGA2P52926 SNORD115-16-201ENST00000363887 82 ntBASIC2.53□□□□□ -2
HMGA2P52926 SNORD115-1-201ENST00000364961 82 ntBASIC2.53□□□□□ -2
HMGA2P52926 MIR134-201ENST00000385258 73 ntBASIC2.53□□□□□ -2
HMGA2P52926 RNA5SP354-201ENST00000391247 136 ntBASIC2.53□□□□□ -2
HMGA2P52926 BTF3P4-201ENST00000418852 495 ntBASIC2.53□□□□□ -2
HMGA2P52926 RPS4XP11-201ENST00000446897 772 ntBASIC2.53□□□□□ -2
HMGA2P52926 snoU13.4-201ENST00000458916 104 ntBASIC2.53□□□□□ -2
HMGA2P52926 snoU13.14-201ENST00000459372 104 ntBASIC2.53□□□□□ -2
HMGA2P52926 RPS26P48-201ENST00000491713 339 ntBASIC2.53□□□□□ -2
HMGA2P52926 RNU6-1270P-201ENST00000517128 108 ntBASIC2.53□□□□□ -2
HMGA2P52926 DEFB131E-201ENST00000532329 154 ntBASIC2.53□□□□□ -2
HMGA2P52926 MIR3670-2-201ENST00000582974 65 ntBASIC2.53□□□□□ -2
HMGA2P52926 MIR3158-1-201ENST00000583596 81 ntBASIC2.53□□□□□ -2
HMGA2P52926 MIR3670-1-201ENST00000584160 65 ntBASIC2.53□□□□□ -2
HMGA2P52926 MIR3670-3-201ENST00000584855 65 ntBASIC2.53□□□□□ -2
HMGA2P52926 HSPE1P7-201ENST00000604681 321 ntBASIC2.53□□□□□ -2
HMGA2P52926 AC019176.2-201ENST00000611579 315 ntBASIC2.53□□□□□ -2
HMGA2P52926 MIR3670-4-201ENST00000612260 65 ntBASIC2.53□□□□□ -2
HMGA2P52926 AC034229.5-201ENST00000624258 185 ntBASIC2.53□□□□□ -2
HMGA2P52926 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.53□□□□□ -2
HMGA2P52926 AL162726.3-218ENST00000636401 95 ntBASIC2.53□□□□□ -2
HMGA2P52926 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
HMGA2P52926 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.53□□□□□ -2
HMGA2P52926 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HMGA2P52926 U8.9-201ENST00000365667 134 ntBASIC2.52□□□□□ -2.01
HMGA2P52926 AC023141.4-201ENST00000412031 328 ntBASIC2.52□□□□□ -2.01
HMGA2P52926 AC080013.2-201ENST00000460866 323 ntBASIC2.52□□□□□ -2.01
HMGA2P52926 OR9P1P-201ENST00000496431 281 ntBASIC2.52□□□□□ -2.01
HMGA2P52926 SCGB1D5P-201ENST00000515134 247 ntBASIC2.52□□□□□ -2.01
HMGA2P52926 RNU6-928P-201ENST00000516876 104 ntBASIC2.52□□□□□ -2.01
HMGA2P52926 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.52□□□□□ -2.01
HMGA2P52926 AC004486.1-201ENST00000546846 233 ntBASIC2.52□□□□□ -2.01
HMGA2P52926 MIR3117-201ENST00000584034 78 ntBASIC2.52□□□□□ -2.01
HMGA2P52926 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.52□□□□□ -2.01
HMGA2P52926 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.52□□□□□ -2.01
HMGA2P52926 AC091304.10-201ENST00000641554 121 ntBASIC2.52□□□□□ -2.01
HMGA2P52926 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
HMGA2P52926 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HMGA2P52926 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.52□□□□□ -2.01
HMGA2P52926 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HMGA2P52926 FAM35CP-201ENST00000554755 2470 ntBASIC2.51□□□□□ -2.01
HMGA2P52926 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.51□□□□□ -2.01
HMGA2P52926 AL139811.1-201ENST00000424779 2299 ntBASIC2.51□□□□□ -2.01
HMGA2P52926 SNORA25.6-201ENST00000364121 118 ntBASIC2.51□□□□□ -2.01
HMGA2P52926 SNORA62.3-201ENST00000365110 153 ntBASIC2.51□□□□□ -2.01
HMGA2P52926 SNORD115-35-201ENST00000365122 82 ntBASIC2.51□□□□□ -2.01
HMGA2P52926 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
HMGA2P52926 AC010598.1-201ENST00000510378 103 ntBASIC2.51□□□□□ -2.01
HMGA2P52926 MRPS17P9-201ENST00000511924 393 ntBASIC2.51□□□□□ -2.01
HMGA2P52926 SNORA67.7-201ENST00000516664 135 ntBASIC2.51□□□□□ -2.01
HMGA2P52926 RNU6-1098P-201ENST00000516772 96 ntBASIC2.51□□□□□ -2.01
HMGA2P52926 SUMO2P16-201ENST00000519475 264 ntBASIC2.51□□□□□ -2.01
HMGA2P52926 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.51□□□□□ -2.01
HMGA2P52926 AC027176.1-201ENST00000560204 514 ntBASIC2.51□□□□□ -2.01
HMGA2P52926 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.51□□□□□ -2.01
HMGA2P52926 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.51□□□□□ -2.01
HMGA2P52926 AL161431.1-201ENST00000618966 4205 ntBASIC2.51□□□□□ -2.01
HMGA2P52926 AC010680.1-201ENST00000590024 3590 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 RNU6-888P-201ENST00000363010 101 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 Y_RNA.298-201ENST00000364960 107 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 SNORA26-201ENST00000391286 122 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 SNORA11B-201ENST00000408175 129 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 AL353813.1-201ENST00000440700 253 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 AC012308.1-201ENST00000451232 178 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 RPS3P1-201ENST00000456781 192 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 RNU7-57P-201ENST00000459540 60 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 AC023141.12-201ENST00000512399 199 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 Y_RNA.666-201ENST00000516187 112 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 HSPE1P18-201ENST00000517602 280 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.5□□□□□ -2.01
HMGA2P52926 MIR4777-201ENST00000583710 86 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 RPS15AP11-201ENST00000594193 385 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 RNA5SP108-201ENST00000605921 117 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 AC006111.3-201ENST00000622137 383 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 AL353746.1-201ENST00000566293 6881 ntBASIC2.5□□□□□ -2.01
HMGA2P52926 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HMGA2P52926 snoU2_19.1-201ENST00000362361 80 ntBASIC2.49□□□□□ -2.01
HMGA2P52926 RNU6-170P-201ENST00000362832 104 ntBASIC2.49□□□□□ -2.01
HMGA2P52926 Y_RNA.94-201ENST00000363068 106 ntBASIC2.49□□□□□ -2.01
HMGA2P52926 RNU6-944P-201ENST00000364023 107 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms