Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 uc_338.4-201ENST00000616635 176 ntBASIC-0.63□□□□□ -2.51
GTF2A1P52655 MTND1P7-201ENST00000632801 297 ntBASIC-0.63□□□□□ -2.51
GTF2A1P52655 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 SNORD50.1-201ENST00000362987 71 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 RNU6-280P-201ENST00000364145 104 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 RNY4P34-201ENST00000364779 95 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 RNU6-46P-201ENST00000383860 107 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 MIR196A2-201ENST00000385189 110 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 RNA5SP300-201ENST00000391197 107 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 RNU6-903P-201ENST00000391270 109 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 MIR873-201ENST00000401120 77 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 RNA5SP163-201ENST00000410304 99 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 RNU6-195P-201ENST00000411352 109 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.64□□□□□ -2.51
GTF2A1P52655 AL354751.2-201ENST00000415471 210 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 AC092447.3-201ENST00000426027 686 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 RNU6-329P-201ENST00000459618 107 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 AC091959.1-201ENST00000495857 238 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.64□□□□□ -2.51
GTF2A1P52655 AC138869.1-201ENST00000568623 124 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 Z94722.1-201ENST00000604328 474 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 MIR3666-201ENST00000607845 111 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 MIR8064-201ENST00000612863 90 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 AC009248.2-201ENST00000619826 254 ntBASIC-0.64□□□□□ -2.51
GTF2A1P52655 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.65□□□□□ -2.51
GTF2A1P52655 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.65□□□□□ -2.51
GTF2A1P52655 MIR153-2-201ENST00000385225 87 ntBASIC-0.65□□□□□ -2.51
GTF2A1P52655 SUMO1P3-201ENST00000439961 304 ntBASIC-0.65□□□□□ -2.51
GTF2A1P52655 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.65□□□□□ -2.51
GTF2A1P52655 RNU6-469P-201ENST00000516253 101 ntBASIC-0.65□□□□□ -2.51
GTF2A1P52655 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.65□□□□□ -2.51
GTF2A1P52655 RNU6-504P-201ENST00000516568 104 ntBASIC-0.65□□□□□ -2.51
GTF2A1P52655 PIGPP4-201ENST00000584447 307 ntBASIC-0.65□□□□□ -2.51
GTF2A1P52655 AC011921.3-201ENST00000605540 361 ntBASIC-0.65□□□□□ -2.51
GTF2A1P52655 uc_338.36-201ENST00000622331 158 ntBASIC-0.65□□□□□ -2.51
GTF2A1P52655 RNU6-500P-201ENST00000362349 107 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 SNORD50B-201ENST00000364995 70 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 SNORA32.3-201ENST00000384772 121 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 AC090844.1-201ENST00000422019 156 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 AL358934.1-201ENST00000432346 324 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 AC009961.2-201ENST00000435771 251 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 MIR18B-201ENST00000454574 71 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 RNU7-185P-201ENST00000459215 60 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.66□□□□□ -2.52
GTF2A1P52655 CCDC34P1-201ENST00000507441 517 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 AC010486.3-201ENST00000511602 785 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 AC018448.1-201ENST00000552843 316 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 AC090617.3-201ENST00000573670 475 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 MIR3152-201ENST00000579801 74 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.66□□□□□ -2.52
GTF2A1P52655 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 RNU1-29P-201ENST00000606574 126 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 MIR548AZ-201ENST00000616567 95 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 FTX_2.1-201ENST00000618816 94 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 AC010332.2-201ENST00000613083 1904 ntBASIC-0.66□□□□□ -2.52
GTF2A1P52655 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.67□□□□□ -2.52
GTF2A1P52655 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.67□□□□□ -2.52
GTF2A1P52655 AL590002.1-201ENST00000406554 418 ntBASIC-0.67□□□□□ -2.52
GTF2A1P52655 MIR1257-201ENST00000408490 117 ntBASIC-0.67□□□□□ -2.52
GTF2A1P52655 SNRPGP10-201ENST00000432323 225 ntBASIC-0.67□□□□□ -2.52
GTF2A1P52655 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.67□□□□□ -2.52
GTF2A1P52655 RNU7-180P-201ENST00000459240 63 ntBASIC-0.67□□□□□ -2.52
GTF2A1P52655 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.67□□□□□ -2.52
GTF2A1P52655 AC005828.6-201ENST00000606610 232 ntBASIC-0.67□□□□□ -2.52
GTF2A1P52655 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.67□□□□□ -2.52
GTF2A1P52655 HULC.1-201ENST00000612720 240 ntBASIC-0.67□□□□□ -2.52
GTF2A1P52655 AC006504.8-201ENST00000621046 635 ntBASIC-0.67□□□□□ -2.52
GTF2A1P52655 uc_338.22-201ENST00000622722 187 ntBASIC-0.67□□□□□ -2.52
GTF2A1P52655 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.67□□□□□ -2.52
GTF2A1P52655 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 RNU6-652P-201ENST00000365488 107 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.68□□□□□ -2.52
GTF2A1P52655 HMGN2P22-201ENST00000427588 175 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 AC073464.1-201ENST00000429823 534 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.68□□□□□ -2.52
GTF2A1P52655 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 AC046134.1-201ENST00000514454 666 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 RNA5SP285-201ENST00000516619 119 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 RNU6-180P-201ENST00000516697 61 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 AL157687.1-201ENST00000554853 619 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 MIR4752-201ENST00000579672 72 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 MIR4791-201ENST00000607666 84 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 AL157392.4-201ENST00000609756 345 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 AC087683.2-201ENST00000611384 326 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 AC016597.2-201ENST00000613256 341 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 AC240442.1-201ENST00000616055 283 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 MIR7844-201ENST00000616161 122 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 MIR6740-201ENST00000618268 113 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 U6.115-201ENST00000636045 103 ntBASIC-0.68□□□□□ -2.52
GTF2A1P52655 RNA5SP257-201ENST00000363023 116 ntBASIC-0.69□□□□□ -2.52
GTF2A1P52655 SNORA63C-201ENST00000364578 129 ntBASIC-0.69□□□□□ -2.52
GTF2A1P52655 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.69□□□□□ -2.52
GTF2A1P52655 RPL30P16-201ENST00000419341 429 ntBASIC-0.69□□□□□ -2.52
GTF2A1P52655 MTCO2P27-201ENST00000420740 428 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms