Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.17□□□□□ -2.22
GPC3P51654 Y_RNA.243-201ENST00000364481 109 ntBASIC1.16□□□□□ -2.22
GPC3P51654 MIR520G-201ENST00000385064 90 ntBASIC1.16□□□□□ -2.22
GPC3P51654 AC018865.2-201ENST00000423631 129 ntBASIC1.16□□□□□ -2.22
GPC3P51654 AC005002.2-201ENST00000438228 269 ntBASIC1.16□□□□□ -2.22
GPC3P51654 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.16□□□□□ -2.22
GPC3P51654 RPS29P28-201ENST00000446439 141 ntBASIC1.16□□□□□ -2.22
GPC3P51654 AC091951.2-201ENST00000500762 203 ntBASIC1.16□□□□□ -2.22
GPC3P51654 RNU6-875P-201ENST00000516488 106 ntBASIC1.16□□□□□ -2.22
GPC3P51654 Y_RNA.702-201ENST00000516843 96 ntBASIC1.16□□□□□ -2.22
GPC3P51654 RNU6-341P-201ENST00000516973 96 ntBASIC1.16□□□□□ -2.22
GPC3P51654 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.16□□□□□ -2.22
GPC3P51654 AL358944.1-201ENST00000528537 144 ntBASIC1.16□□□□□ -2.22
GPC3P51654 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.16□□□□□ -2.22
GPC3P51654 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.16□□□□□ -2.22
GPC3P51654 AP001094.1-201ENST00000579805 193 ntBASIC1.16□□□□□ -2.22
GPC3P51654 AL022345.2-201ENST00000606307 135 ntBASIC1.16□□□□□ -2.22
GPC3P51654 SNORD114-21-201ENST00000606412 72 ntBASIC1.16□□□□□ -2.22
GPC3P51654 AC073349.3-201ENST00000617616 186 ntBASIC1.16□□□□□ -2.22
GPC3P51654 U2.1-201ENST00000618978 145 ntBASIC1.16□□□□□ -2.22
GPC3P51654 AC127459.3-201ENST00000624328 466 ntBASIC1.16□□□□□ -2.22
GPC3P51654 RNU6-376P-201ENST00000384731 106 ntBASIC1.15□□□□□ -2.23
GPC3P51654 MT-TD-201ENST00000387419 68 ntBASIC1.15□□□□□ -2.23
GPC3P51654 AL606517.2-201ENST00000442855 241 ntBASIC1.15□□□□□ -2.23
GPC3P51654 AL137792.2-201ENST00000443484 235 ntBASIC1.15□□□□□ -2.23
GPC3P51654 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.15□□□□□ -2.23
GPC3P51654 RNU7-152P-201ENST00000458982 64 ntBASIC1.15□□□□□ -2.23
GPC3P51654 OR2A41P-201ENST00000473586 105 ntBASIC1.15□□□□□ -2.23
GPC3P51654 AC105758.1-201ENST00000506038 399 ntBASIC1.15□□□□□ -2.23
GPC3P51654 RNU6-408P-201ENST00000515910 100 ntBASIC1.15□□□□□ -2.23
GPC3P51654 SNORA31.10-201ENST00000516482 106 ntBASIC1.15□□□□□ -2.23
GPC3P51654 RNU2-56P-201ENST00000516826 190 ntBASIC1.15□□□□□ -2.23
GPC3P51654 SNORD116.3-201ENST00000517176 78 ntBASIC1.15□□□□□ -2.23
GPC3P51654 AP002004.2-201ENST00000531656 154 ntBASIC1.15□□□□□ -2.23
GPC3P51654 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.15□□□□□ -2.23
GPC3P51654 VN1R91P-201ENST00000594377 169 ntBASIC1.15□□□□□ -2.23
GPC3P51654 AC012676.2-201ENST00000619258 186 ntBASIC1.15□□□□□ -2.23
GPC3P51654 SNORD3E-202ENST00000627253 216 ntBASIC1.15□□□□□ -2.23
GPC3P51654 MTND4LP32-201ENST00000636111 270 ntBASIC1.15□□□□□ -2.23
GPC3P51654 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
GPC3P51654 Y_RNA.27-201ENST00000362540 103 ntBASIC1.14□□□□□ -2.23
GPC3P51654 Y_RNA.146-201ENST00000363549 102 ntBASIC1.14□□□□□ -2.23
GPC3P51654 Y_RNA.230-201ENST00000364348 109 ntBASIC1.14□□□□□ -2.23
GPC3P51654 MIR518E-201ENST00000385252 88 ntBASIC1.14□□□□□ -2.23
GPC3P51654 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.14□□□□□ -2.23
GPC3P51654 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.14□□□□□ -2.23
GPC3P51654 SNORA70.22-201ENST00000517160 124 ntBASIC1.14□□□□□ -2.23
GPC3P51654 AL355375.2-201ENST00000574825 175 ntBASIC1.14□□□□□ -2.23
GPC3P51654 AL390123.1-201ENST00000603216 237 ntBASIC1.14□□□□□ -2.23
GPC3P51654 AL021879.1-201ENST00000611756 288 ntBASIC1.14□□□□□ -2.23
GPC3P51654 AC084781.2-201ENST00000615568 161 ntBASIC1.14□□□□□ -2.23
GPC3P51654 AC027335.2-201ENST00000624030 375 ntBASIC1.14□□□□□ -2.23
GPC3P51654 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
GPC3P51654 Y_RNA.355-201ENST00000365462 98 ntBASIC1.13□□□□□ -2.23
GPC3P51654 Y_RNA.508-201ENST00000384502 114 ntBASIC1.13□□□□□ -2.23
GPC3P51654 SNORD116-29-201ENST00000384516 83 ntBASIC1.13□□□□□ -2.23
GPC3P51654 MIR520E-201ENST00000384867 87 ntBASIC1.13□□□□□ -2.23
GPC3P51654 MIR559-201ENST00000385188 96 ntBASIC1.13□□□□□ -2.23
GPC3P51654 RNA5SP482-201ENST00000391269 118 ntBASIC1.13□□□□□ -2.23
GPC3P51654 Y_RNA.632-201ENST00000459189 102 ntBASIC1.13□□□□□ -2.23
GPC3P51654 SNORD19B-201ENST00000459623 84 ntBASIC1.13□□□□□ -2.23
GPC3P51654 RPS23P4-201ENST00000487908 423 ntBASIC1.13□□□□□ -2.23
GPC3P51654 SNORA31.4-201ENST00000516049 129 ntBASIC1.13□□□□□ -2.23
GPC3P51654 RNU6-1012P-201ENST00000516606 109 ntBASIC1.13□□□□□ -2.23
GPC3P51654 AC005176.2-201ENST00000596933 147 ntBASIC1.13□□□□□ -2.23
GPC3P51654 HSPE1P19-201ENST00000603327 295 ntBASIC1.13□□□□□ -2.23
GPC3P51654 AL513534.2-201ENST00000603836 250 ntBASIC1.13□□□□□ -2.23
GPC3P51654 AC004467.1-201ENST00000615678 330 ntBASIC1.13□□□□□ -2.23
GPC3P51654 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
GPC3P51654 RNU6-454P-201ENST00000364292 107 ntBASIC1.12□□□□□ -2.23
GPC3P51654 Y_RNA.265-201ENST00000364677 108 ntBASIC1.12□□□□□ -2.23
GPC3P51654 Y_RNA.361-201ENST00000365515 120 ntBASIC1.12□□□□□ -2.23
GPC3P51654 SNORA22-201ENST00000383907 134 ntBASIC1.12□□□□□ -2.23
GPC3P51654 Y_RNA.526-201ENST00000384572 110 ntBASIC1.12□□□□□ -2.23
GPC3P51654 SNORA22C-201ENST00000384614 134 ntBASIC1.12□□□□□ -2.23
GPC3P51654 RNU6-1304P-201ENST00000411374 106 ntBASIC1.12□□□□□ -2.23
GPC3P51654 AL390729.2-201ENST00000416137 156 ntBASIC1.12□□□□□ -2.23
GPC3P51654 RNU7-169P-201ENST00000459456 61 ntBASIC1.12□□□□□ -2.23
GPC3P51654 RNU6-120P-201ENST00000516077 103 ntBASIC1.12□□□□□ -2.23
GPC3P51654 RNU6-976P-201ENST00000516086 111 ntBASIC1.12□□□□□ -2.23
GPC3P51654 SNORD116-28-201ENST00000516123 91 ntBASIC1.12□□□□□ -2.23
GPC3P51654 RNU6-699P-201ENST00000517081 110 ntBASIC1.12□□□□□ -2.23
GPC3P51654 RNU2-12P-201ENST00000517216 168 ntBASIC1.12□□□□□ -2.23
GPC3P51654 AC023442.1-201ENST00000531247 422 ntBASIC1.12□□□□□ -2.23
GPC3P51654 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.12□□□□□ -2.23
GPC3P51654 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.11□□□□□ -2.23
GPC3P51654 RNU4-38P-201ENST00000364472 129 ntBASIC1.11□□□□□ -2.23
GPC3P51654 RNU4-76P-201ENST00000364509 141 ntBASIC1.11□□□□□ -2.23
GPC3P51654 Y_RNA.269-201ENST00000364685 89 ntBASIC1.11□□□□□ -2.23
GPC3P51654 Y_RNA.303-201ENST00000364998 94 ntBASIC1.11□□□□□ -2.23
GPC3P51654 Y_RNA.315-201ENST00000365117 102 ntBASIC1.11□□□□□ -2.23
GPC3P51654 RNU1-115P-201ENST00000365329 160 ntBASIC1.11□□□□□ -2.23
GPC3P51654 Y_RNA.356-201ENST00000365475 113 ntBASIC1.11□□□□□ -2.23
GPC3P51654 MIR660-201ENST00000385235 97 ntBASIC1.11□□□□□ -2.23
GPC3P51654 RNU2-54P-201ENST00000410299 190 ntBASIC1.11□□□□□ -2.23
GPC3P51654 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.11□□□□□ -2.23
GPC3P51654 U8.19-201ENST00000459095 133 ntBASIC1.11□□□□□ -2.23
GPC3P51654 RNU6-113P-201ENST00000516653 101 ntBASIC1.11□□□□□ -2.23
GPC3P51654 Y_RNA.713-201ENST00000517013 96 ntBASIC1.11□□□□□ -2.23
GPC3P51654 AP002001.1-203ENST00000534002 267 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms