Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 SNORA79-201ENST00000408376 140 ntBASIC2.47□□□□□ -2.01
CLK3P49761 RNU6-1064P-201ENST00000410626 104 ntBASIC2.47□□□□□ -2.01
CLK3P49761 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.47□□□□□ -2.01
CLK3P49761 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.47□□□□□ -2.01
CLK3P49761 RNU7-26P-201ENST00000458980 63 ntBASIC2.47□□□□□ -2.01
CLK3P49761 SNORA48.11-201ENST00000517015 89 ntBASIC2.47□□□□□ -2.01
CLK3P49761 GTF3AP2-201ENST00000557014 266 ntBASIC2.47□□□□□ -2.01
CLK3P49761 POLR3GP1-201ENST00000594073 261 ntBASIC2.47□□□□□ -2.01
CLK3P49761 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.47□□□□□ -2.01
CLK3P49761 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.47□□□□□ -2.01
CLK3P49761 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.47□□□□□ -2.01
CLK3P49761 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
CLK3P49761 SNORD45.3-201ENST00000363836 72 ntBASIC2.46□□□□□ -2.02
CLK3P49761 RNU6-915P-201ENST00000364943 103 ntBASIC2.46□□□□□ -2.02
CLK3P49761 SNORD116-13-201ENST00000384408 92 ntBASIC2.46□□□□□ -2.02
CLK3P49761 SNORA80E-201ENST00000384744 137 ntBASIC2.46□□□□□ -2.02
CLK3P49761 MIR1283-1-201ENST00000408494 87 ntBASIC2.46□□□□□ -2.02
CLK3P49761 RN7SKP101-201ENST00000411376 320 ntBASIC2.46□□□□□ -2.02
CLK3P49761 AC025750.2-201ENST00000442609 450 ntBASIC2.46□□□□□ -2.02
CLK3P49761 SNRPGP8-201ENST00000454064 226 ntBASIC2.46□□□□□ -2.02
CLK3P49761 RNU7-57P-201ENST00000459540 60 ntBASIC2.46□□□□□ -2.02
CLK3P49761 RPS26P55-201ENST00000471178 356 ntBASIC2.46□□□□□ -2.02
CLK3P49761 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.46□□□□□ -2.02
CLK3P49761 AC010598.1-201ENST00000510378 103 ntBASIC2.46□□□□□ -2.02
CLK3P49761 Y_RNA.712-201ENST00000517011 92 ntBASIC2.46□□□□□ -2.02
CLK3P49761 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.46□□□□□ -2.02
CLK3P49761 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.46□□□□□ -2.02
CLK3P49761 MIR378D2-201ENST00000580636 98 ntBASIC2.46□□□□□ -2.02
CLK3P49761 MIR4635-201ENST00000583759 79 ntBASIC2.46□□□□□ -2.02
CLK3P49761 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.46□□□□□ -2.02
CLK3P49761 AC005972.2-201ENST00000604690 348 ntBASIC2.46□□□□□ -2.02
CLK3P49761 snoZ196.1-201ENST00000625269 89 ntBASIC2.46□□□□□ -2.02
CLK3P49761 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CLK3P49761 Z82209.1-201ENST00000422141 2135 ntBASIC2.45□□□□□ -2.02
CLK3P49761 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.45□□□□□ -2.02
CLK3P49761 RNU6-859P-201ENST00000362728 107 ntBASIC2.45□□□□□ -2.02
CLK3P49761 RNY1P11-201ENST00000363759 113 ntBASIC2.45□□□□□ -2.02
CLK3P49761 SNORA5B-201ENST00000363786 132 ntBASIC2.45□□□□□ -2.02
CLK3P49761 RNU6-674P-201ENST00000363831 107 ntBASIC2.45□□□□□ -2.02
CLK3P49761 RNU6-944P-201ENST00000364023 107 ntBASIC2.45□□□□□ -2.02
CLK3P49761 RNU1-112P-201ENST00000364401 164 ntBASIC2.45□□□□□ -2.02
CLK3P49761 MIR561-201ENST00000385216 97 ntBASIC2.45□□□□□ -2.02
CLK3P49761 Y_RNA.622-201ENST00000411091 108 ntBASIC2.45□□□□□ -2.02
CLK3P49761 RNU2-55P-201ENST00000411146 174 ntBASIC2.45□□□□□ -2.02
CLK3P49761 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.45□□□□□ -2.02
CLK3P49761 AC063976.3-201ENST00000426849 329 ntBASIC2.45□□□□□ -2.02
CLK3P49761 RNU7-107P-201ENST00000459121 61 ntBASIC2.45□□□□□ -2.02
CLK3P49761 SNORD65B-201ENST00000459126 73 ntBASIC2.45□□□□□ -2.02
CLK3P49761 RNU6-437P-201ENST00000459408 95 ntBASIC2.45□□□□□ -2.02
CLK3P49761 RNU6-221P-201ENST00000459541 99 ntBASIC2.45□□□□□ -2.02
CLK3P49761 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.45□□□□□ -2.02
CLK3P49761 AC090142.3-201ENST00000519012 385 ntBASIC2.45□□□□□ -2.02
CLK3P49761 EIF4BP1-201ENST00000554881 351 ntBASIC2.45□□□□□ -2.02
CLK3P49761 MIR4753-201ENST00000585119 83 ntBASIC2.45□□□□□ -2.02
CLK3P49761 AC120024.3-201ENST00000603167 156 ntBASIC2.45□□□□□ -2.02
CLK3P49761 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
CLK3P49761 SNORA80A-201ENST00000363922 136 ntBASIC2.44□□□□□ -2.02
CLK3P49761 RNU6-1082P-201ENST00000364574 107 ntBASIC2.44□□□□□ -2.02
CLK3P49761 RNU6-975P-201ENST00000384296 105 ntBASIC2.44□□□□□ -2.02
CLK3P49761 RNU6-476P-201ENST00000384726 107 ntBASIC2.44□□□□□ -2.02
CLK3P49761 Y_RNA.584-201ENST00000391090 114 ntBASIC2.44□□□□□ -2.02
CLK3P49761 AL512604.1-201ENST00000404812 257 ntBASIC2.44□□□□□ -2.02
CLK3P49761 MIR1294-201ENST00000408503 142 ntBASIC2.44□□□□□ -2.02
CLK3P49761 AL135786.1-201ENST00000415892 214 ntBASIC2.44□□□□□ -2.02
CLK3P49761 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.44□□□□□ -2.02
CLK3P49761 AC245047.4-201ENST00000433189 144 ntBASIC2.44□□□□□ -2.02
CLK3P49761 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.44□□□□□ -2.02
CLK3P49761 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.44□□□□□ -2.02
CLK3P49761 SNORD109B-201ENST00000458961 67 ntBASIC2.44□□□□□ -2.02
CLK3P49761 SNORD109A-201ENST00000459128 67 ntBASIC2.44□□□□□ -2.02
CLK3P49761 RNU7-14P-201ENST00000459331 62 ntBASIC2.44□□□□□ -2.02
CLK3P49761 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.44□□□□□ -2.02
CLK3P49761 RPL23AP54-201ENST00000495129 419 ntBASIC2.44□□□□□ -2.02
CLK3P49761 PDCD5P2-201ENST00000507570 312 ntBASIC2.44□□□□□ -2.02
CLK3P49761 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.44□□□□□ -2.02
CLK3P49761 RNU1-104P-201ENST00000517280 175 ntBASIC2.44□□□□□ -2.02
CLK3P49761 IGLV3-17-201ENST00000519099 244 ntBASIC2.44□□□□□ -2.02
CLK3P49761 CYCSP26-201ENST00000534107 320 ntBASIC2.44□□□□□ -2.02
CLK3P49761 PRELID2P1-201ENST00000552837 301 ntBASIC2.44□□□□□ -2.02
CLK3P49761 MIR4658-201ENST00000584344 65 ntBASIC2.44□□□□□ -2.02
CLK3P49761 U4atac.1-201ENST00000618345 95 ntBASIC2.44□□□□□ -2.02
CLK3P49761 AC009487.4-201ENST00000624969 3585 ntBASIC2.44□□□□□ -2.02
CLK3P49761 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLK3P49761 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.43□□□□□ -2.02
CLK3P49761 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.43□□□□□ -2.02
CLK3P49761 RNU1-23P-201ENST00000363361 144 ntBASIC2.43□□□□□ -2.02
CLK3P49761 SNORA38-201ENST00000363946 132 ntBASIC2.43□□□□□ -2.02
CLK3P49761 RNU6-546P-201ENST00000383991 107 ntBASIC2.43□□□□□ -2.02
CLK3P49761 RNU6-1144P-201ENST00000384247 104 ntBASIC2.43□□□□□ -2.02
CLK3P49761 RNU6-429P-201ENST00000384582 108 ntBASIC2.43□□□□□ -2.02
CLK3P49761 MIR196B-201ENST00000384852 84 ntBASIC2.43□□□□□ -2.02
CLK3P49761 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CLK3P49761 RNY4P18-201ENST00000391107 89 ntBASIC2.43□□□□□ -2.02
CLK3P49761 RNU2-32P-201ENST00000411193 191 ntBASIC2.43□□□□□ -2.02
CLK3P49761 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.43□□□□□ -2.02
CLK3P49761 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.43□□□□□ -2.02
CLK3P49761 RNU6-197P-201ENST00000516680 100 ntBASIC2.43□□□□□ -2.02
CLK3P49761 AC018630.3-201ENST00000542637 96 ntBASIC2.43□□□□□ -2.02
CLK3P49761 AL160236.1-201ENST00000556317 195 ntBASIC2.43□□□□□ -2.02
CLK3P49761 Y_RNA.757-201ENST00000578934 114 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms