Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 MIR6132-201ENST00000622083 109 ntBASIC2.39□□□□□ -2.03
NPTX2P47972 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NPTX2P47972 Y_RNA.233-201ENST00000364407 101 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 RNU6-1062P-201ENST00000383908 107 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 Y_RNA.435-201ENST00000384095 112 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 MIR1262-201ENST00000408276 93 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NPTX2P47972 RPS27P22-201ENST00000478056 241 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 RNU6-63P-201ENST00000516690 95 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 IGLV3-17-201ENST00000519099 244 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.38□□□□□ -2.03
NPTX2P47972 MIR3945-201ENST00000581853 98 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 U2.15-201ENST00000611544 191 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 U2.16-201ENST00000613119 191 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.38□□□□□ -2.03
NPTX2P47972 U2.12-201ENST00000613778 191 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 U2.20-201ENST00000613956 192 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 U2.9-201ENST00000615427 191 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 U2.11-201ENST00000616345 191 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 U2.2-201ENST00000616535 191 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 U2.3-201ENST00000617785 191 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 U2.19-201ENST00000618602 191 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 RNU2-1-201ENST00000618664 191 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 U2.6-201ENST00000619225 191 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 U2.5-201ENST00000619465 191 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 U2.10-201ENST00000620268 191 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 AC068647.2-201ENST00000637380 353 ntBASIC2.38□□□□□ -2.03
NPTX2P47972 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NPTX2P47972 CENPCP1-201ENST00000533085 2578 ntBASIC2.37□□□□□ -2.03
NPTX2P47972 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.37□□□□□ -2.03
NPTX2P47972 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.37□□□□□ -2.03
NPTX2P47972 Y_RNA.99-201ENST00000363138 105 ntBASIC2.37□□□□□ -2.03
NPTX2P47972 RNU4-10P-201ENST00000364383 140 ntBASIC2.37□□□□□ -2.03
NPTX2P47972 U8.7-201ENST00000364940 136 ntBASIC2.37□□□□□ -2.03
NPTX2P47972 RNU6-117P-201ENST00000365415 107 ntBASIC2.37□□□□□ -2.03
NPTX2P47972 RNU4-17P-201ENST00000365598 141 ntBASIC2.37□□□□□ -2.03
NPTX2P47972 SNORA70B-201ENST00000384210 135 ntBASIC2.37□□□□□ -2.03
NPTX2P47972 SNORA64-201ENST00000384674 134 ntBASIC2.37□□□□□ -2.03
NPTX2P47972 SNORA48.3-201ENST00000391081 134 ntBASIC2.37□□□□□ -2.03
NPTX2P47972 SNORA11.4-201ENST00000408823 129 ntBASIC2.37□□□□□ -2.03
NPTX2P47972 RN7SKP51-201ENST00000410781 304 ntBASIC2.37□□□□□ -2.03
NPTX2P47972 RN7SKP284-201ENST00000411002 343 ntBASIC2.37□□□□□ -2.03
NPTX2P47972 RN7SKP192-201ENST00000411291 327 ntBASIC2.37□□□□□ -2.03
NPTX2P47972 HSPE1P21-201ENST00000438283 308 ntBASIC2.37□□□□□ -2.03
NPTX2P47972 SUMO1P3-201ENST00000439961 304 ntBASIC2.37□□□□□ -2.03
NPTX2P47972 AC074198.2-201ENST00000508153 258 ntBASIC2.37□□□□□ -2.03
NPTX2P47972 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.37□□□□□ -2.03
NPTX2P47972 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.37□□□□□ -2.03
NPTX2P47972 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.37□□□□□ -2.03
NPTX2P47972 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.37□□□□□ -2.03
NPTX2P47972 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NPTX2P47972 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
NPTX2P47972 U8.2-201ENST00000363156 134 ntBASIC2.36□□□□□ -2.03
NPTX2P47972 SNORD114-6-201ENST00000364393 72 ntBASIC2.36□□□□□ -2.03
NPTX2P47972 SNORA16B-201ENST00000364674 135 ntBASIC2.36□□□□□ -2.03
NPTX2P47972 Y_RNA.293-201ENST00000364908 93 ntBASIC2.36□□□□□ -2.03
NPTX2P47972 MIR518A2-201ENST00000384966 87 ntBASIC2.36□□□□□ -2.03
NPTX2P47972 AL023284.1-201ENST00000403956 276 ntBASIC2.36□□□□□ -2.03
NPTX2P47972 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.36□□□□□ -2.03
NPTX2P47972 RPL36AP21-201ENST00000490372 323 ntBASIC2.36□□□□□ -2.03
NPTX2P47972 AC117454.1-201ENST00000491120 168 ntBASIC2.36□□□□□ -2.03
NPTX2P47972 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.36□□□□□ -2.03
NPTX2P47972 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.36□□□□□ -2.03
NPTX2P47972 RNU7-115P-201ENST00000516433 55 ntBASIC2.36□□□□□ -2.03
NPTX2P47972 MIR4438-201ENST00000585271 93 ntBASIC2.36□□□□□ -2.03
NPTX2P47972 MIR548AY-201ENST00000617669 107 ntBASIC2.36□□□□□ -2.03
NPTX2P47972 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NPTX2P47972 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NPTX2P47972 RNU1-22P-201ENST00000363334 158 ntBASIC2.35□□□□□ -2.03
NPTX2P47972 RNU6-1205P-201ENST00000363625 106 ntBASIC2.35□□□□□ -2.03
NPTX2P47972 SNORA67.3-201ENST00000384366 140 ntBASIC2.35□□□□□ -2.03
NPTX2P47972 Y_RNA.571-201ENST00000384753 98 ntBASIC2.35□□□□□ -2.03
NPTX2P47972 AL603908.1-201ENST00000406098 201 ntBASIC2.35□□□□□ -2.03
NPTX2P47972 MIR1253-201ENST00000408273 105 ntBASIC2.35□□□□□ -2.03
NPTX2P47972 HMGN2P34-201ENST00000437647 269 ntBASIC2.35□□□□□ -2.03
NPTX2P47972 RPS29P21-201ENST00000496272 170 ntBASIC2.35□□□□□ -2.03
NPTX2P47972 AC011406.1-201ENST00000512440 370 ntBASIC2.35□□□□□ -2.03
NPTX2P47972 AC097462.1-201ENST00000514125 324 ntBASIC2.35□□□□□ -2.03
NPTX2P47972 RNU6-1219P-201ENST00000516143 112 ntBASIC2.35□□□□□ -2.03
NPTX2P47972 AC005972.2-201ENST00000604690 348 ntBASIC2.35□□□□□ -2.03
NPTX2P47972 AL365434.2-201ENST00000607979 234 ntBASIC2.35□□□□□ -2.03
NPTX2P47972 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.35□□□□□ -2.03
NPTX2P47972 U6.106-201ENST00000636360 105 ntBASIC2.35□□□□□ -2.03
NPTX2P47972 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
NPTX2P47972 AC008555.8-201ENST00000623602 2168 ntBASIC2.34□□□□□ -2.03
NPTX2P47972 Y_RNA.240-201ENST00000364469 95 ntBASIC2.34□□□□□ -2.03
NPTX2P47972 RNU6-1323P-201ENST00000384025 107 ntBASIC2.34□□□□□ -2.03
NPTX2P47972 SNORA8.3-201ENST00000384679 139 ntBASIC2.34□□□□□ -2.03
NPTX2P47972 MIR626-201ENST00000385032 94 ntBASIC2.34□□□□□ -2.03
NPTX2P47972 RNU6-381P-201ENST00000391259 108 ntBASIC2.34□□□□□ -2.03
NPTX2P47972 RNU2-2P-201ENST00000410396 191 ntBASIC2.34□□□□□ -2.03
NPTX2P47972 RNA5SP511-201ENST00000410487 115 ntBASIC2.34□□□□□ -2.03
NPTX2P47972 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.34□□□□□ -2.03
NPTX2P47972 AC104435.1-201ENST00000483483 166 ntBASIC2.34□□□□□ -2.03
NPTX2P47972 AC121758.2-201ENST00000553271 193 ntBASIC2.34□□□□□ -2.03
NPTX2P47972 AL137100.2-201ENST00000555786 315 ntBASIC2.34□□□□□ -2.03
NPTX2P47972 AC015720.1-201ENST00000565251 277 ntBASIC2.34□□□□□ -2.03
NPTX2P47972 MIR4648-201ENST00000580107 72 ntBASIC2.34□□□□□ -2.03
NPTX2P47972 MIR5002-201ENST00000584713 97 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms