Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 MIR4282-201ENST00000583613 67 ntBASIC1.88□□□□□ -2.11
RPL3P39023 MIR4448-201ENST00000584360 86 ntBASIC1.88□□□□□ -2.11
RPL3P39023 AC005357.1-201ENST00000588399 301 ntBASIC1.88□□□□□ -2.11
RPL3P39023 AC007229.1-201ENST00000590455 412 ntBASIC1.88□□□□□ -2.11
RPL3P39023 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
RPL3P39023 Y_RNA.771-201ENST00000598668 102 ntBASIC1.88□□□□□ -2.11
RPL3P39023 AC011921.3-201ENST00000605540 361 ntBASIC1.88□□□□□ -2.11
RPL3P39023 Y_RNA.789-201ENST00000622480 102 ntBASIC1.88□□□□□ -2.11
RPL3P39023 AC012640.5-201ENST00000623897 319 ntBASIC1.88□□□□□ -2.11
RPL3P39023 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.88□□□□□ -2.11
RPL3P39023 AC134026.1-201ENST00000623249 2239 ntBASIC1.88□□□□□ -2.11
RPL3P39023 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
RPL3P39023 Y_RNA.65-201ENST00000362846 100 ntBASIC1.87□□□□□ -2.11
RPL3P39023 SNORA6-201ENST00000384033 151 ntBASIC1.87□□□□□ -2.11
RPL3P39023 Y_RNA.500-201ENST00000384466 111 ntBASIC1.87□□□□□ -2.11
RPL3P39023 RNU6-136P-201ENST00000384663 107 ntBASIC1.87□□□□□ -2.11
RPL3P39023 RNU6-1248P-201ENST00000391096 64 ntBASIC1.87□□□□□ -2.11
RPL3P39023 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.87□□□□□ -2.11
RPL3P39023 AL139156.1-201ENST00000412785 841 ntBASIC1.87□□□□□ -2.11
RPL3P39023 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.87□□□□□ -2.11
RPL3P39023 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.87□□□□□ -2.11
RPL3P39023 SNORD116-28-201ENST00000516123 91 ntBASIC1.87□□□□□ -2.11
RPL3P39023 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
RPL3P39023 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.87□□□□□ -2.11
RPL3P39023 AC073413.2-201ENST00000604332 360 ntBASIC1.87□□□□□ -2.11
RPL3P39023 BX284668.6-201ENST00000606899 438 ntBASIC1.87□□□□□ -2.11
RPL3P39023 AL078604.3-201ENST00000615580 211 ntBASIC1.87□□□□□ -2.11
RPL3P39023 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPL3P39023 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPL3P39023 SNORA16B-201ENST00000364674 135 ntBASIC1.86□□□□□ -2.11
RPL3P39023 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
RPL3P39023 SNORD23.1-201ENST00000408212 104 ntBASIC1.86□□□□□ -2.11
RPL3P39023 RNA5SP501-201ENST00000410990 112 ntBASIC1.86□□□□□ -2.11
RPL3P39023 OOSP1P1-201ENST00000423265 274 ntBASIC1.86□□□□□ -2.11
RPL3P39023 AL445646.1-201ENST00000431784 216 ntBASIC1.86□□□□□ -2.11
RPL3P39023 AC245047.4-201ENST00000433189 144 ntBASIC1.86□□□□□ -2.11
RPL3P39023 AL162725.1-201ENST00000435405 301 ntBASIC1.86□□□□□ -2.11
RPL3P39023 AC104332.1-201ENST00000440471 797 ntBASIC1.86□□□□□ -2.11
RPL3P39023 AL606517.2-201ENST00000442855 241 ntBASIC1.86□□□□□ -2.11
RPL3P39023 RNU7-141P-201ENST00000459304 62 ntBASIC1.86□□□□□ -2.11
RPL3P39023 SNORA59A-201ENST00000459326 152 ntBASIC1.86□□□□□ -2.11
RPL3P39023 RPS26P45-201ENST00000471748 340 ntBASIC1.86□□□□□ -2.11
RPL3P39023 TRBV12-1-201ENST00000479785 344 ntBASIC1.86□□□□□ -2.11
RPL3P39023 RNU7-99P-201ENST00000516271 62 ntBASIC1.86□□□□□ -2.11
RPL3P39023 RNU2-19P-201ENST00000517288 84 ntBASIC1.86□□□□□ -2.11
RPL3P39023 MIR5094-201ENST00000578766 85 ntBASIC1.86□□□□□ -2.11
RPL3P39023 AC091178.2-201ENST00000584401 117 ntBASIC1.86□□□□□ -2.11
RPL3P39023 AL359075.3-201ENST00000613288 217 ntBASIC1.86□□□□□ -2.11
RPL3P39023 AL590808.1-201ENST00000618696 141 ntBASIC1.86□□□□□ -2.11
RPL3P39023 ZNF658B-202ENST00000615961 3375 ntBASIC1.85□□□□□ -2.11
RPL3P39023 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
RPL3P39023 U8.7-201ENST00000364940 136 ntBASIC1.85□□□□□ -2.11
RPL3P39023 RNU6-211P-201ENST00000384047 107 ntBASIC1.85□□□□□ -2.11
RPL3P39023 SNORA48.1-201ENST00000390879 135 ntBASIC1.85□□□□□ -2.11
RPL3P39023 SUMO2P12-201ENST00000405924 140 ntBASIC1.85□□□□□ -2.11
RPL3P39023 AL355497.1-201ENST00000406262 551 ntBASIC1.85□□□□□ -2.11
RPL3P39023 AC055731.1-201ENST00000474387 401 ntBASIC1.85□□□□□ -2.11
RPL3P39023 RPL36AP21-201ENST00000490372 323 ntBASIC1.85□□□□□ -2.11
RPL3P39023 AL163195.1-201ENST00000496941 348 ntBASIC1.85□□□□□ -2.11
RPL3P39023 RNU6-1278P-201ENST00000516130 107 ntBASIC1.85□□□□□ -2.11
RPL3P39023 MIR5089-201ENST00000580047 84 ntBASIC1.85□□□□□ -2.11
RPL3P39023 MIR4435-1-201ENST00000582552 80 ntBASIC1.85□□□□□ -2.11
RPL3P39023 AC090425.1-201ENST00000610007 140 ntBASIC1.85□□□□□ -2.11
RPL3P39023 Y_RNA.783-201ENST00000613546 102 ntBASIC1.85□□□□□ -2.11
RPL3P39023 AC068647.2-201ENST00000637380 353 ntBASIC1.85□□□□□ -2.11
RPL3P39023 RNY1-201ENST00000364228 113 ntBASIC1.84□□□□□ -2.11
RPL3P39023 SNORA8-201ENST00000384574 139 ntBASIC1.84□□□□□ -2.11
RPL3P39023 SNORA64-201ENST00000384674 134 ntBASIC1.84□□□□□ -2.11
RPL3P39023 RNU6-376P-201ENST00000384731 106 ntBASIC1.84□□□□□ -2.11
RPL3P39023 MTCO2P33-201ENST00000402100 465 ntBASIC1.84□□□□□ -2.11
RPL3P39023 Y_RNA.590-201ENST00000410140 107 ntBASIC1.84□□□□□ -2.11
RPL3P39023 RN7SKP192-201ENST00000411291 327 ntBASIC1.84□□□□□ -2.11
RPL3P39023 RNA5SP508-201ENST00000411327 119 ntBASIC1.84□□□□□ -2.11
RPL3P39023 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.84□□□□□ -2.11
RPL3P39023 RPS4XP11-201ENST00000446897 772 ntBASIC1.84□□□□□ -2.11
RPL3P39023 AC091021.1-201ENST00000468051 388 ntBASIC1.84□□□□□ -2.11
RPL3P39023 AC117454.1-201ENST00000491120 168 ntBASIC1.84□□□□□ -2.11
RPL3P39023 RNU7-115P-201ENST00000516433 55 ntBASIC1.84□□□□□ -2.11
RPL3P39023 MIR4529-201ENST00000578110 78 ntBASIC1.84□□□□□ -2.11
RPL3P39023 AC005972.2-201ENST00000604690 348 ntBASIC1.84□□□□□ -2.11
RPL3P39023 AC013791.1-201ENST00000616619 62 ntBASIC1.84□□□□□ -2.11
RPL3P39023 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.84□□□□□ -2.11
RPL3P39023 uc_338.20-201ENST00000621563 178 ntBASIC1.84□□□□□ -2.11
RPL3P39023 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.84□□□□□ -2.11
RPL3P39023 AC064859.1-201ENST00000624741 174 ntBASIC1.84□□□□□ -2.11
RPL3P39023 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.12
RPL3P39023 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.12
RPL3P39023 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RPL3P39023 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
RPL3P39023 Y_RNA.292-201ENST00000364904 97 ntBASIC1.83□□□□□ -2.12
RPL3P39023 RNU6-1318P-201ENST00000365389 103 ntBASIC1.83□□□□□ -2.12
RPL3P39023 MIR515-2-201ENST00000384883 83 ntBASIC1.83□□□□□ -2.12
RPL3P39023 MIR515-1-201ENST00000384884 83 ntBASIC1.83□□□□□ -2.12
RPL3P39023 RNA5SP323-201ENST00000391094 133 ntBASIC1.83□□□□□ -2.12
RPL3P39023 RN7SKP223-201ENST00000410582 62 ntBASIC1.83□□□□□ -2.12
RPL3P39023 RNU2-40P-201ENST00000410833 196 ntBASIC1.83□□□□□ -2.12
RPL3P39023 Z98742.3-201ENST00000418637 326 ntBASIC1.83□□□□□ -2.12
RPL3P39023 HSPE1P21-201ENST00000438283 308 ntBASIC1.83□□□□□ -2.12
RPL3P39023 MTND2P29-201ENST00000438595 412 ntBASIC1.83□□□□□ -2.12
RPL3P39023 RPS27P1-201ENST00000450552 247 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms