Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC009474.2-201ENST00000451383 136 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 RPS27P22-201ENST00000478056 241 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 AL163540.1-201ENST00000485382 386 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 RPL36AP21-201ENST00000490372 323 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.31□□□□□ -2.2
HMGCLP35914 Y_RNA.713-201ENST00000517013 96 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 AC023157.2-201ENST00000540596 141 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 MIR4422-201ENST00000581938 83 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 MIR3660-201ENST00000584845 100 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 MIR8054-201ENST00000620877 86 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
HMGCLP35914 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMGCLP35914 SNORD81.1-201ENST00000363064 77 ntBASIC1.3□□□□□ -2.2
HMGCLP35914 Y_RNA.813-201ENST00000364639 102 ntBASIC1.3□□□□□ -2.2
HMGCLP35914 SNORD14.1-201ENST00000365609 90 ntBASIC1.3□□□□□ -2.2
HMGCLP35914 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
HMGCLP35914 RNU6-308P-201ENST00000390957 107 ntBASIC1.3□□□□□ -2.2
HMGCLP35914 AL031003.1-201ENST00000404229 172 ntBASIC1.3□□□□□ -2.2
HMGCLP35914 U8.20-201ENST00000459445 131 ntBASIC1.3□□□□□ -2.2
HMGCLP35914 Y_RNA.701-201ENST00000516812 110 ntBASIC1.3□□□□□ -2.2
HMGCLP35914 RNU7-172P-201ENST00000517125 64 ntBASIC1.3□□□□□ -2.2
HMGCLP35914 AL358944.1-201ENST00000528537 144 ntBASIC1.3□□□□□ -2.2
HMGCLP35914 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.3□□□□□ -2.2
HMGCLP35914 AC015688.6-201ENST00000577737 104 ntBASIC1.3□□□□□ -2.2
HMGCLP35914 Y_RNA.772-201ENST00000606692 102 ntBASIC1.3□□□□□ -2.2
HMGCLP35914 AC095038.3-201ENST00000634439 195 ntBASIC1.3□□□□□ -2.2
HMGCLP35914 SNORA22B-201ENST00000383876 138 ntBASIC1.29□□□□□ -2.2
HMGCLP35914 RNU6-1227P-201ENST00000383981 107 ntBASIC1.29□□□□□ -2.2
HMGCLP35914 SNORD26-201ENST00000384147 75 ntBASIC1.29□□□□□ -2.2
HMGCLP35914 RNU6-950P-201ENST00000384651 107 ntBASIC1.29□□□□□ -2.2
HMGCLP35914 RNU6-1031P-201ENST00000384773 107 ntBASIC1.29□□□□□ -2.2
HMGCLP35914 RNU6-823P-201ENST00000391042 103 ntBASIC1.29□□□□□ -2.2
HMGCLP35914 SNORA40.6-201ENST00000391153 128 ntBASIC1.29□□□□□ -2.2
HMGCLP35914 MRPL42P3-201ENST00000401492 326 ntBASIC1.29□□□□□ -2.2
HMGCLP35914 RNU6-1186P-201ENST00000410429 97 ntBASIC1.29□□□□□ -2.2
HMGCLP35914 AC010154.1-201ENST00000425857 269 ntBASIC1.29□□□□□ -2.2
HMGCLP35914 AC004223.1-201ENST00000479840 271 ntBASIC1.29□□□□□ -2.2
HMGCLP35914 RNA5SP458-201ENST00000516188 119 ntBASIC1.29□□□□□ -2.2
HMGCLP35914 RNU6-341P-201ENST00000516973 96 ntBASIC1.29□□□□□ -2.2
HMGCLP35914 AC068338.1-201ENST00000565567 176 ntBASIC1.29□□□□□ -2.2
HMGCLP35914 MIR3171-201ENST00000584270 74 ntBASIC1.29□□□□□ -2.2
HMGCLP35914 RPS29P30-201ENST00000600975 111 ntBASIC1.29□□□□□ -2.2
HMGCLP35914 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.29□□□□□ -2.2
HMGCLP35914 MIR6079-201ENST00000635807 62 ntBASIC1.29□□□□□ -2.2
HMGCLP35914 MIR26B-201ENST00000362251 77 ntBASIC1.28□□□□□ -2.2
HMGCLP35914 Y_RNA.158-201ENST00000363651 101 ntBASIC1.28□□□□□ -2.2
HMGCLP35914 Y_RNA.222-201ENST00000364264 102 ntBASIC1.28□□□□□ -2.2
HMGCLP35914 Y_RNA.276-201ENST00000364732 109 ntBASIC1.28□□□□□ -2.2
HMGCLP35914 RNU6-1175P-201ENST00000365200 107 ntBASIC1.28□□□□□ -2.2
HMGCLP35914 AC117470.1-201ENST00000381974 330 ntBASIC1.28□□□□□ -2.2
HMGCLP35914 RNU6-505P-201ENST00000384427 107 ntBASIC1.28□□□□□ -2.2
HMGCLP35914 RNA5SP323-201ENST00000391094 133 ntBASIC1.28□□□□□ -2.2
HMGCLP35914 RNU11-5P-201ENST00000391216 129 ntBASIC1.28□□□□□ -2.2
HMGCLP35914 MIR1252-201ENST00000408861 65 ntBASIC1.28□□□□□ -2.2
HMGCLP35914 SNORA70.12-201ENST00000516084 153 ntBASIC1.28□□□□□ -2.2
HMGCLP35914 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.28□□□□□ -2.2
HMGCLP35914 AC073413.2-201ENST00000604332 360 ntBASIC1.28□□□□□ -2.2
HMGCLP35914 AC021506.2-201ENST00000612354 169 ntBASIC1.28□□□□□ -2.2
HMGCLP35914 AC127459.3-201ENST00000624328 466 ntBASIC1.28□□□□□ -2.2
HMGCLP35914 Y_RNA.380-201ENST00000365663 111 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.27□□□□□ -2.21
HMGCLP35914 Y_RNA.439-201ENST00000384119 94 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 MIR562-201ENST00000384894 95 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 RNU6-440P-201ENST00000390882 105 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 RNU1-78P-201ENST00000391248 165 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.27□□□□□ -2.21
HMGCLP35914 MTND1P14-201ENST00000427400 950 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 MTCO2P12-201ENST00000427426 682 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 AC245047.3-201ENST00000429428 127 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 AL162725.1-201ENST00000435405 301 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 AC005042.3-201ENST00000453230 174 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 RPS29P29-201ENST00000456396 171 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 AC005908.1-201ENST00000468701 347 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 AC010655.3-201ENST00000478818 450 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 RNU6-1278P-201ENST00000516130 107 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 Y_RNA.715-201ENST00000517082 110 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 Y_RNA.721-201ENST00000517207 102 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 RNU6-988P-201ENST00000519081 107 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.27□□□□□ -2.21
HMGCLP35914 AC136932.1-201ENST00000574771 208 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 MIR4709-201ENST00000577272 72 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 AL162424.1-201ENST00000602325 221 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 AL929325.1-201ENST00000603096 117 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 AC006380.1-201ENST00000603598 186 ntBASIC1.27□□□□□ -2.21
HMGCLP35914 RNU6-1123P-201ENST00000362347 106 ntBASIC1.26□□□□□ -2.21
HMGCLP35914 RNU6-414P-201ENST00000363705 104 ntBASIC1.26□□□□□ -2.21
HMGCLP35914 Y_RNA.183-201ENST00000363882 113 ntBASIC1.26□□□□□ -2.21
HMGCLP35914 SNORD115-46-201ENST00000390982 71 ntBASIC1.26□□□□□ -2.21
HMGCLP35914 RNU2-7P-201ENST00000410794 178 ntBASIC1.26□□□□□ -2.21
HMGCLP35914 AC004965.1-201ENST00000413033 213 ntBASIC1.26□□□□□ -2.21
HMGCLP35914 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.26□□□□□ -2.21
HMGCLP35914 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.26□□□□□ -2.21
HMGCLP35914 AC245517.4-201ENST00000448601 281 ntBASIC1.26□□□□□ -2.21
HMGCLP35914 RNU6-1337P-201ENST00000516525 95 ntBASIC1.26□□□□□ -2.21
HMGCLP35914 AC027419.1-201ENST00000522976 328 ntBASIC1.26□□□□□ -2.21
HMGCLP35914 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.26□□□□□ -2.21
HMGCLP35914 AC044792.1-201ENST00000593294 196 ntBASIC1.26□□□□□ -2.21
HMGCLP35914 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.26□□□□□ -2.21
HMGCLP35914 AL353770.2-201ENST00000620024 78 ntBASIC1.26□□□□□ -2.21
HMGCLP35914 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms