Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RNU6-690P-201ENST00000365242 106 ntBASIC3.89□□□□□ -1.79
CLCN1P35523 SNORA51.5-201ENST00000384126 131 ntBASIC3.89□□□□□ -1.79
CLCN1P35523 RNU6-160P-201ENST00000384591 107 ntBASIC3.89□□□□□ -1.79
CLCN1P35523 AC003685.2-201ENST00000422795 395 ntBASIC3.89□□□□□ -1.79
CLCN1P35523 AL163195.1-201ENST00000496941 348 ntBASIC3.89□□□□□ -1.79
CLCN1P35523 RNU7-70P-201ENST00000516941 66 ntBASIC3.89□□□□□ -1.79
CLCN1P35523 AC024995.1-201ENST00000523014 93 ntBASIC3.89□□□□□ -1.79
CLCN1P35523 AC004486.1-201ENST00000546846 233 ntBASIC3.89□□□□□ -1.79
CLCN1P35523 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.89□□□□□ -1.79
CLCN1P35523 AL021368.2-201ENST00000606125 5352 ntBASIC3.89□□□□□ -1.79
CLCN1P35523 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.88□□□□□ -1.79
CLCN1P35523 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.88□□□□□ -1.79
CLCN1P35523 Y_RNA.49-201ENST00000362714 112 ntBASIC3.88□□□□□ -1.79
CLCN1P35523 RNU6-1072P-201ENST00000384703 107 ntBASIC3.88□□□□□ -1.79
CLCN1P35523 RNU6-443P-201ENST00000384780 107 ntBASIC3.88□□□□□ -1.79
CLCN1P35523 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCN1P35523 TRBV12-1-201ENST00000479785 344 ntBASIC3.88□□□□□ -1.79
CLCN1P35523 RNU7-25P-201ENST00000516544 62 ntBASIC3.88□□□□□ -1.79
CLCN1P35523 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCN1P35523 AC006441.5-201ENST00000612680 209 ntBASIC3.88□□□□□ -1.79
CLCN1P35523 AL035470.1-201ENST00000622571 220 ntBASIC3.88□□□□□ -1.79
CLCN1P35523 AL589743.1-201ENST00000551932 2712 ntBASIC3.88□□□□□ -1.79
CLCN1P35523 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLCN1P35523 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.88□□□□□ -1.79
CLCN1P35523 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CLCN1P35523 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.87□□□□□ -1.79
CLCN1P35523 ICE2P2-201ENST00000483823 2787 ntBASIC3.87□□□□□ -1.79
CLCN1P35523 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLCN1P35523 Y_RNA.198-201ENST00000364013 98 ntBASIC3.87□□□□□ -1.79
CLCN1P35523 Y_RNA.213-201ENST00000364178 111 ntBASIC3.87□□□□□ -1.79
CLCN1P35523 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.87□□□□□ -1.79
CLCN1P35523 snoU2-30.1-201ENST00000365012 70 ntBASIC3.87□□□□□ -1.79
CLCN1P35523 Y_RNA.328-201ENST00000365208 113 ntBASIC3.87□□□□□ -1.79
CLCN1P35523 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CLCN1P35523 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.87□□□□□ -1.79
CLCN1P35523 CST2P1-201ENST00000425770 87 ntBASIC3.87□□□□□ -1.79
CLCN1P35523 HMGN2P32-201ENST00000444648 269 ntBASIC3.87□□□□□ -1.79
CLCN1P35523 SCARNA13-201ENST00000516672 275 ntBASIC3.87□□□□□ -1.79
CLCN1P35523 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.87□□□□□ -1.79
CLCN1P35523 AC039056.2-201ENST00000622261 511 ntBASIC3.87□□□□□ -1.79
CLCN1P35523 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLCN1P35523 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.86□□□□□ -1.79
CLCN1P35523 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLCN1P35523 SNORA71.3-201ENST00000362582 128 ntBASIC3.86□□□□□ -1.79
CLCN1P35523 SNORD115-28-201ENST00000363931 81 ntBASIC3.86□□□□□ -1.79
CLCN1P35523 RNA5SP51-201ENST00000364750 119 ntBASIC3.86□□□□□ -1.79
CLCN1P35523 RNU6-1014P-201ENST00000383940 103 ntBASIC3.86□□□□□ -1.79
CLCN1P35523 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CLCN1P35523 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CLCN1P35523 RPL39P34-201ENST00000477141 156 ntBASIC3.86□□□□□ -1.79
CLCN1P35523 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.86□□□□□ -1.79
CLCN1P35523 RNA5SP217-201ENST00000515959 91 ntBASIC3.86□□□□□ -1.79
CLCN1P35523 RNY4P20-201ENST00000516678 93 ntBASIC3.86□□□□□ -1.79
CLCN1P35523 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.86□□□□□ -1.79
CLCN1P35523 CTSLP2-204ENST00000629029 392 ntBASIC3.86□□□□□ -1.79
CLCN1P35523 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.86□□□□□ -1.79
CLCN1P35523 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.86□□□□□ -1.79
CLCN1P35523 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLCN1P35523 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLCN1P35523 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.85□□□□□ -1.79
CLCN1P35523 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLCN1P35523 RNU6-862P-201ENST00000362804 105 ntBASIC3.85□□□□□ -1.79
CLCN1P35523 MIR7-3-201ENST00000384898 110 ntBASIC3.85□□□□□ -1.79
CLCN1P35523 MIR759-201ENST00000390224 91 ntBASIC3.85□□□□□ -1.79
CLCN1P35523 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.85□□□□□ -1.79
CLCN1P35523 MIR4762-201ENST00000585261 75 ntBASIC3.85□□□□□ -1.79
CLCN1P35523 Z83843.1-201ENST00000604070 3685 ntBASIC3.85□□□□□ -1.79
CLCN1P35523 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CLCN1P35523 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLCN1P35523 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLCN1P35523 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLCN1P35523 ZNF720P1-201ENST00000562403 1939 ntBASIC3.84□□□□□ -1.79
CLCN1P35523 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLCN1P35523 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLCN1P35523 SNORA63.1-201ENST00000362493 131 ntBASIC3.84□□□□□ -1.79
CLCN1P35523 Y_RNA.37-201ENST00000362606 108 ntBASIC3.84□□□□□ -1.79
CLCN1P35523 RNY4P6-201ENST00000363667 96 ntBASIC3.84□□□□□ -1.79
CLCN1P35523 RNU6-414P-201ENST00000363705 104 ntBASIC3.84□□□□□ -1.79
CLCN1P35523 RNU6-268P-201ENST00000364174 107 ntBASIC3.84□□□□□ -1.79
CLCN1P35523 Y_RNA.348-201ENST00000365403 103 ntBASIC3.84□□□□□ -1.79
CLCN1P35523 RNU6-905P-201ENST00000384434 107 ntBASIC3.84□□□□□ -1.79
CLCN1P35523 SNORA46-201ENST00000384762 135 ntBASIC3.84□□□□□ -1.79
CLCN1P35523 MIR449B-201ENST00000384995 97 ntBASIC3.84□□□□□ -1.79
CLCN1P35523 MIR483-201ENST00000385070 76 ntBASIC3.84□□□□□ -1.79
CLCN1P35523 MIR181B1-201ENST00000385240 110 ntBASIC3.84□□□□□ -1.79
CLCN1P35523 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLCN1P35523 RN7SL594P-201ENST00000470590 287 ntBASIC3.84□□□□□ -1.79
CLCN1P35523 RN7SL499P-201ENST00000481141 276 ntBASIC3.84□□□□□ -1.79
CLCN1P35523 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CLCN1P35523 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.84□□□□□ -1.8
CLCN1P35523 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CLCN1P35523 RNU6-461P-201ENST00000364195 107 ntBASIC3.83□□□□□ -1.8
CLCN1P35523 U8.5-201ENST00000364528 136 ntBASIC3.83□□□□□ -1.8
CLCN1P35523 Y_RNA.547-201ENST00000384654 119 ntBASIC3.83□□□□□ -1.8
CLCN1P35523 SNORA26.7-201ENST00000391288 122 ntBASIC3.83□□□□□ -1.8
CLCN1P35523 MIR887-201ENST00000401258 79 ntBASIC3.83□□□□□ -1.8
CLCN1P35523 MIR1262-201ENST00000408276 93 ntBASIC3.83□□□□□ -1.8
CLCN1P35523 AL445646.1-201ENST00000431784 216 ntBASIC3.83□□□□□ -1.8
CLCN1P35523 AC107083.1-201ENST00000439643 279 ntBASIC3.83□□□□□ -1.8
CLCN1P35523 AC009238.1-201ENST00000442165 424 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms