Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 AL354751.2-201ENST00000415471 210 ntBASIC-0.63□□□□□ -2.51
SDC4P31431 RPL30P16-201ENST00000419341 429 ntBASIC-0.63□□□□□ -2.51
SDC4P31431 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.63□□□□□ -2.51
SDC4P31431 AL358934.1-201ENST00000432346 324 ntBASIC-0.63□□□□□ -2.51
SDC4P31431 AL512286.1-201ENST00000439244 400 ntBASIC-0.63□□□□□ -2.51
SDC4P31431 RNU7-185P-201ENST00000459215 60 ntBASIC-0.63□□□□□ -2.51
SDC4P31431 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.63□□□□□ -2.51
SDC4P31431 SNORA25.10-201ENST00000515926 124 ntBASIC-0.63□□□□□ -2.51
SDC4P31431 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.63□□□□□ -2.51
SDC4P31431 AC006380.1-201ENST00000603598 186 ntBASIC-0.63□□□□□ -2.51
SDC4P31431 U2.17-201ENST00000611454 95 ntBASIC-0.63□□□□□ -2.51
SDC4P31431 AC009248.2-201ENST00000619826 254 ntBASIC-0.63□□□□□ -2.51
SDC4P31431 MIR6759-201ENST00000638110 65 ntBASIC-0.63□□□□□ -2.51
SDC4P31431 AC068137.4-201ENST00000638485 296 ntBASIC-0.63□□□□□ -2.51
SDC4P31431 RNY4P34-201ENST00000364779 95 ntBASIC-0.64□□□□□ -2.51
SDC4P31431 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.64□□□□□ -2.51
SDC4P31431 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.64□□□□□ -2.51
SDC4P31431 RNU6-606P-201ENST00000384721 111 ntBASIC-0.64□□□□□ -2.51
SDC4P31431 MIR501-201ENST00000390204 84 ntBASIC-0.64□□□□□ -2.51
SDC4P31431 RNU6-325P-201ENST00000411132 105 ntBASIC-0.64□□□□□ -2.51
SDC4P31431 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.64□□□□□ -2.51
SDC4P31431 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.64□□□□□ -2.51
SDC4P31431 SNORD126-201ENST00000459475 77 ntBASIC-0.64□□□□□ -2.51
SDC4P31431 RNA5SP285-201ENST00000516619 119 ntBASIC-0.64□□□□□ -2.51
SDC4P31431 RNU6-180P-201ENST00000516697 61 ntBASIC-0.64□□□□□ -2.51
SDC4P31431 MIR3152-201ENST00000579801 74 ntBASIC-0.64□□□□□ -2.51
SDC4P31431 SNORD50.1-201ENST00000362987 71 ntBASIC-0.65□□□□□ -2.51
SDC4P31431 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.65□□□□□ -2.51
SDC4P31431 RNU6-636P-201ENST00000384598 107 ntBASIC-0.65□□□□□ -2.51
SDC4P31431 AL590002.1-201ENST00000406554 418 ntBASIC-0.65□□□□□ -2.51
SDC4P31431 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.65□□□□□ -2.51
SDC4P31431 MIR4645-201ENST00000583158 77 ntBASIC-0.65□□□□□ -2.51
SDC4P31431 AP000811.1-201ENST00000603803 651 ntBASIC-0.65□□□□□ -2.51
SDC4P31431 AC069431.2-201ENST00000604149 1099 ntBASIC-0.65□□□□□ -2.51
SDC4P31431 MIR4791-201ENST00000607666 84 ntBASIC-0.65□□□□□ -2.51
SDC4P31431 AC016597.2-201ENST00000613256 341 ntBASIC-0.65□□□□□ -2.51
SDC4P31431 uc_338.4-201ENST00000616635 176 ntBASIC-0.65□□□□□ -2.51
SDC4P31431 uc_338.11-201ENST00000619132 160 ntBASIC-0.65□□□□□ -2.51
SDC4P31431 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.66□□□□□ -2.52
SDC4P31431 RNU6-923P-201ENST00000364753 107 ntBASIC-0.66□□□□□ -2.52
SDC4P31431 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.66□□□□□ -2.52
SDC4P31431 RNU6-159P-201ENST00000391080 106 ntBASIC-0.66□□□□□ -2.52
SDC4P31431 RNU2-72P-201ENST00000411175 163 ntBASIC-0.66□□□□□ -2.52
SDC4P31431 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.66□□□□□ -2.52
SDC4P31431 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.66□□□□□ -2.52
SDC4P31431 AC092447.3-201ENST00000426027 686 ntBASIC-0.66□□□□□ -2.52
SDC4P31431 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.66□□□□□ -2.52
SDC4P31431 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.66□□□□□ -2.52
SDC4P31431 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.66□□□□□ -2.52
SDC4P31431 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.66□□□□□ -2.52
SDC4P31431 CCDC34P1-201ENST00000507441 517 ntBASIC-0.66□□□□□ -2.52
SDC4P31431 AC093303.1-201ENST00000514549 295 ntBASIC-0.66□□□□□ -2.52
SDC4P31431 RNU6-469P-201ENST00000516253 101 ntBASIC-0.66□□□□□ -2.52
SDC4P31431 AL137161.1-201ENST00000532231 390 ntBASIC-0.66□□□□□ -2.52
SDC4P31431 CPDP1-201ENST00000579660 283 ntBASIC-0.66□□□□□ -2.52
SDC4P31431 uc_338.22-201ENST00000622722 187 ntBASIC-0.66□□□□□ -2.52
SDC4P31431 AC106754.1-201ENST00000562632 1513 ntBASIC-0.67□□□□□ -2.52
SDC4P31431 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.67□□□□□ -2.52
SDC4P31431 SNORD114-28-201ENST00000363610 72 ntBASIC-0.67□□□□□ -2.52
SDC4P31431 RNU6-652P-201ENST00000365488 107 ntBASIC-0.67□□□□□ -2.52
SDC4P31431 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.67□□□□□ -2.52
SDC4P31431 RNU6-903P-201ENST00000391270 109 ntBASIC-0.67□□□□□ -2.52
SDC4P31431 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.67□□□□□ -2.52
SDC4P31431 MIR1257-201ENST00000408490 117 ntBASIC-0.67□□□□□ -2.52
SDC4P31431 MTCO1P5-201ENST00000433573 344 ntBASIC-0.67□□□□□ -2.52
SDC4P31431 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.67□□□□□ -2.52
SDC4P31431 RNU7-181P-201ENST00000517234 74 ntBASIC-0.67□□□□□ -2.52
SDC4P31431 MIR4999-201ENST00000585029 91 ntBASIC-0.67□□□□□ -2.52
SDC4P31431 MIR3666-201ENST00000607845 111 ntBASIC-0.67□□□□□ -2.52
SDC4P31431 TUSC7.1-201ENST00000610969 165 ntBASIC-0.67□□□□□ -2.52
SDC4P31431 AC087683.2-201ENST00000611384 326 ntBASIC-0.67□□□□□ -2.52
SDC4P31431 FAM157A-202ENST00000615155 405 ntBASIC-0.67□□□□□ -2.52
SDC4P31431 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.68□□□□□ -2.52
SDC4P31431 RNU6-108P-201ENST00000365558 107 ntBASIC-0.68□□□□□ -2.52
SDC4P31431 RNU6-46P-201ENST00000383860 107 ntBASIC-0.68□□□□□ -2.52
SDC4P31431 RNU6-1000P-201ENST00000391066 106 ntBASIC-0.68□□□□□ -2.52
SDC4P31431 AC073464.1-201ENST00000429823 534 ntBASIC-0.68□□□□□ -2.52
SDC4P31431 MTND1P17-201ENST00000448961 204 ntBASIC-0.68□□□□□ -2.52
SDC4P31431 AC010486.3-201ENST00000511602 785 ntBASIC-0.68□□□□□ -2.52
SDC4P31431 AC046134.1-201ENST00000514454 666 ntBASIC-0.68□□□□□ -2.52
SDC4P31431 RNU6-897P-201ENST00000517135 105 ntBASIC-0.68□□□□□ -2.52
SDC4P31431 RNA5SP47-201ENST00000517230 109 ntBASIC-0.68□□□□□ -2.52
SDC4P31431 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.68□□□□□ -2.52
SDC4P31431 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.68□□□□□ -2.52
SDC4P31431 MIR3925-201ENST00000584674 77 ntBASIC-0.68□□□□□ -2.52
SDC4P31431 AL442067.1-201ENST00000613261 223 ntBASIC-0.68□□□□□ -2.52
SDC4P31431 AC006504.8-201ENST00000621046 635 ntBASIC-0.68□□□□□ -2.52
SDC4P31431 U6.115-201ENST00000636045 103 ntBASIC-0.68□□□□□ -2.52
SDC4P31431 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.69□□□□□ -2.52
SDC4P31431 U8.17-201ENST00000391292 132 ntBASIC-0.69□□□□□ -2.52
SDC4P31431 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.69□□□□□ -2.52
SDC4P31431 MTCYBP4-201ENST00000401524 249 ntBASIC-0.69□□□□□ -2.52
SDC4P31431 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.69□□□□□ -2.52
SDC4P31431 MCFD2P1-201ENST00000417812 300 ntBASIC-0.69□□□□□ -2.52
SDC4P31431 AC133104.1-201ENST00000429100 218 ntBASIC-0.69□□□□□ -2.52
SDC4P31431 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.69□□□□□ -2.52
SDC4P31431 GMFBP1-201ENST00000467831 427 ntBASIC-0.69□□□□□ -2.52
SDC4P31431 RPL30P10-201ENST00000488148 337 ntBASIC-0.69□□□□□ -2.52
SDC4P31431 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.69□□□□□ -2.52
SDC4P31431 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms