Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MTCO2P16-201ENST00000436962 677 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 AC073415.1-201ENST00000449240 153 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 MTND2P39-201ENST00000457230 764 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 AC108740.1-201ENST00000498629 225 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 AC093303.1-201ENST00000514549 295 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 RNU6-232P-201ENST00000517144 64 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 AK6P2-201ENST00000549020 471 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 MIR5696-201ENST00000578474 85 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 PIGPP4-201ENST00000584447 307 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 Z69908.1-201ENST00000622603 247 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 AC127459.3-201ENST00000624328 466 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 SNORA20B-201ENST00000384220 132 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 RNU6-297P-201ENST00000384636 107 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 RNU6-679P-201ENST00000391003 106 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 EIF4E2P1-201ENST00000393781 255 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 RPL30P16-201ENST00000419341 429 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 MTND1P26-201ENST00000440488 538 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 MTND3P3-201ENST00000505004 126 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 ACA59.1-201ENST00000515966 143 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 RNU6-1116P-201ENST00000517269 99 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.02□□□□□ -2.41
COL4A5P29400 Y_RNA.757-201ENST00000578934 114 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 RNA5SP214-201ENST00000363378 118 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 RNU6-1099P-201ENST00000363533 107 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 AC117470.1-201ENST00000381974 330 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 RNU6-281P-201ENST00000384212 103 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 RNU6-1297P-201ENST00000384415 104 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 RNU6-136P-201ENST00000384663 107 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 MIR520F-201ENST00000384824 87 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 RNU6-1304P-201ENST00000411374 106 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 MTND1P4-201ENST00000435196 415 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.02□□□□□ -2.41
COL4A5P29400 AC114811.1-201ENST00000507207 168 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.02□□□□□ -2.41
COL4A5P29400 MTND1P22-201ENST00000510572 951 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.02□□□□□ -2.41
COL4A5P29400 AC120024.3-201ENST00000603167 156 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 AL121757.2-201ENST00000611223 313 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 AC015726.2-201ENST00000620112 122 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 AC099654.12-201ENST00000639868 649 ntBASIC0.02□□□□□ -2.41
COL4A5P29400 SNORA27.1-201ENST00000362604 124 ntBASIC0.01□□□□□ -2.41
COL4A5P29400 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.01□□□□□ -2.41
COL4A5P29400 Y_RNA.453-201ENST00000384223 109 ntBASIC0.01□□□□□ -2.41
COL4A5P29400 MLLT10P1-201ENST00000418346 262 ntBASIC0.01□□□□□ -2.41
COL4A5P29400 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.01□□□□□ -2.41
COL4A5P29400 AC073464.1-201ENST00000429823 534 ntBASIC0.01□□□□□ -2.41
COL4A5P29400 AC046134.1-201ENST00000514454 666 ntBASIC0.01□□□□□ -2.41
COL4A5P29400 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.01□□□□□ -2.41
COL4A5P29400 MIR4424-201ENST00000585257 86 ntBASIC0.01□□□□□ -2.41
COL4A5P29400 AC004223.4-201ENST00000612426 332 ntBASIC0.01□□□□□ -2.41
COL4A5P29400 AC104260.1-201ENST00000616660 539 ntBASIC0.01□□□□□ -2.41
COL4A5P29400 SNORD50.1-201ENST00000362987 71 ntBASIC0□□□□□ -2.41
COL4A5P29400 RNU6-1322P-201ENST00000364309 107 ntBASIC0□□□□□ -2.41
COL4A5P29400 Y_RNA.378-201ENST00000365652 113 ntBASIC0□□□□□ -2.41
COL4A5P29400 RNU6-128P-201ENST00000383976 107 ntBASIC0□□□□□ -2.41
COL4A5P29400 MRPS10P2-201ENST00000431226 381 ntBASIC0□□□□□ -2.41
COL4A5P29400 RNU7-41P-201ENST00000515917 61 ntBASIC0□□□□□ -2.41
COL4A5P29400 Y_RNA.683-201ENST00000516508 93 ntBASIC0□□□□□ -2.41
COL4A5P29400 RNU6-1038P-201ENST00000516516 104 ntBASIC0□□□□□ -2.41
COL4A5P29400 RNU6-759P-201ENST00000516740 103 ntBASIC0□□□□□ -2.41
COL4A5P29400 RAC1P9-201ENST00000604990 392 ntBASIC0□□□□□ -2.41
COL4A5P29400 uc_338.16-201ENST00000621804 95 ntBASIC0□□□□□ -2.41
COL4A5P29400 MIR371B-201ENST00000638082 66 ntBASIC0□□□□□ -2.41
COL4A5P29400 MIRLET7D-201ENST00000362263 87 ntBASIC-0.01□□□□□ -2.41
COL4A5P29400 MIR18A-201ENST00000362310 71 ntBASIC-0.01□□□□□ -2.41
COL4A5P29400 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.01□□□□□ -2.41
COL4A5P29400 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.01□□□□□ -2.41
COL4A5P29400 MIR15B-201ENST00000385045 98 ntBASIC-0.01□□□□□ -2.41
COL4A5P29400 MIR516B2-201ENST00000385190 85 ntBASIC-0.01□□□□□ -2.41
COL4A5P29400 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.01□□□□□ -2.41
COL4A5P29400 RNU6-248P-201ENST00000410720 107 ntBASIC-0.01□□□□□ -2.41
COL4A5P29400 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.01□□□□□ -2.41
COL4A5P29400 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.01□□□□□ -2.41
COL4A5P29400 U8.19-201ENST00000459095 133 ntBASIC-0.01□□□□□ -2.41
COL4A5P29400 U8.22-201ENST00000459141 133 ntBASIC-0.01□□□□□ -2.41
COL4A5P29400 RNA5SP227-201ENST00000516184 113 ntBASIC-0.01□□□□□ -2.41
COL4A5P29400 AC091144.1-201ENST00000519573 138 ntBASIC-0.01□□□□□ -2.41
COL4A5P29400 MIR5583-1-201ENST00000580941 59 ntBASIC-0.01□□□□□ -2.41
COL4A5P29400 MIR4273-201ENST00000582824 84 ntBASIC-0.01□□□□□ -2.41
COL4A5P29400 MIR4762-201ENST00000585261 75 ntBASIC-0.01□□□□□ -2.41
COL4A5P29400 AC023510.2-201ENST00000622162 746 ntBASIC-0.01□□□□□ -2.41
COL4A5P29400 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 SNORD14.1-201ENST00000365609 90 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 MIR520H-201ENST00000385126 88 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.02□□□□□ -2.41
COL4A5P29400 Z82188.1-201ENST00000436709 154 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 RNU6-261P-201ENST00000459506 102 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 AL158211.1-201ENST00000566763 763 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 MIR548AR-201ENST00000582191 57 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 AC012433.1-201ENST00000588916 398 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 AC073648.5-201ENST00000603502 305 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 LARP7P1-201ENST00000605576 316 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 AC019193.3-201ENST00000609144 554 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.02□□□□□ -2.41
COL4A5P29400 SNORD49B-201ENST00000365172 72 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms