Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.26□□□□□ -2.21
PTPN4P29074 AL050343.2-201ENST00000607338 280 ntBASIC1.26□□□□□ -2.21
PTPN4P29074 AC011476.5-201ENST00000615594 130 ntBASIC1.26□□□□□ -2.21
PTPN4P29074 MIR8065-201ENST00000620577 100 ntBASIC1.26□□□□□ -2.21
PTPN4P29074 MIR8054-201ENST00000620877 86 ntBASIC1.26□□□□□ -2.21
PTPN4P29074 AL513423.1-201ENST00000621695 132 ntBASIC1.26□□□□□ -2.21
PTPN4P29074 AL008636.1-201ENST00000625038 1018 ntBASIC1.26□□□□□ -2.21
PTPN4P29074 U6.92-201ENST00000636464 89 ntBASIC1.26□□□□□ -2.21
PTPN4P29074 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
PTPN4P29074 AC018630.2-201ENST00000534866 2403 ntBASIC1.26□□□□□ -2.21
PTPN4P29074 Y_RNA.124-201ENST00000363339 93 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 Y_RNA.269-201ENST00000364685 89 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 RNU1-115P-201ENST00000365329 160 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 Y_RNA.361-201ENST00000365515 120 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 MIR873-201ENST00000401120 77 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.25□□□□□ -2.21
PTPN4P29074 RNU4-77P-201ENST00000516692 156 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 MIR4659A-201ENST00000580269 81 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 AL390123.1-201ENST00000603216 237 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 AC092447.9-201ENST00000603395 144 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 AL133255.1-201ENST00000606374 441 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 AC004467.1-201ENST00000615678 330 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 Y_RNA.116-201ENST00000363292 103 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 SNORD115-30-201ENST00000364117 82 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 RNU6-53P-201ENST00000365367 106 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 RNA5SP259-201ENST00000365541 109 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 MIR618-201ENST00000385287 98 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 SNORA12.1-201ENST00000390873 148 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 RNU6-440P-201ENST00000390882 105 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.24□□□□□ -2.21
PTPN4P29074 AL137792.2-201ENST00000443484 235 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 Y_RNA.661-201ENST00000516003 99 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 RNU7-28P-201ENST00000516759 62 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 RNA5SP102-201ENST00000516865 106 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 AC021506.2-201ENST00000612354 169 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 MIR6079-201ENST00000635807 62 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
PTPN4P29074 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.23□□□□□ -2.21
PTPN4P29074 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
PTPN4P29074 SNORD114-7-201ENST00000362520 77 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 Y_RNA.101-201ENST00000363154 102 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 Y_RNA.197-201ENST00000364004 102 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 RNU6-20P-201ENST00000384106 107 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 Y_RNA.508-201ENST00000384502 114 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 Y_RNA.509-201ENST00000384506 99 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 SNORA40.6-201ENST00000391153 128 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 AC022028.1-201ENST00000412054 408 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.23□□□□□ -2.21
PTPN4P29074 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.23□□□□□ -2.21
PTPN4P29074 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.23□□□□□ -2.21
PTPN4P29074 MIR3660-201ENST00000584845 100 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 AC005176.2-201ENST00000596933 147 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 AC240442.1-201ENST00000616055 283 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 AC073349.3-201ENST00000617616 186 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.23□□□□□ -2.21
PTPN4P29074 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.23□□□□□ -2.21
PTPN4P29074 Y_RNA.39-201ENST00000362620 98 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 RNU6-626P-201ENST00000363354 107 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 Y_RNA.224-201ENST00000364308 111 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 RNU5E-4P-201ENST00000364931 120 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 RNU6-117P-201ENST00000365415 107 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 Y_RNA.355-201ENST00000365462 98 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.22□□□□□ -2.21
PTPN4P29074 MIR518E-201ENST00000385252 88 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 RNU2-54P-201ENST00000410299 190 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 RNU6-1199P-201ENST00000411249 104 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 AC091021.1-201ENST00000468051 388 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 AC004223.1-201ENST00000479840 271 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 MIR5188-201ENST00000583467 113 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 AC091178.2-201ENST00000584401 117 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 C8orf59P2-201ENST00000603441 271 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 AL080274.1-201ENST00000605565 220 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 SNORD58B-201ENST00000607313 66 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 AL138825.1-201ENST00000618587 192 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 AL606534.2-204ENST00000635008 178 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
PTPN4P29074 Y_RNA.112-201ENST00000363250 102 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 Y_RNA.230-201ENST00000364348 109 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 RNU6-867P-201ENST00000364956 107 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 Y_RNA.419-201ENST00000384041 102 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 RNY1P14-201ENST00000384426 108 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 RPL39P38-201ENST00000467018 153 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 RNU6-1278P-201ENST00000516130 107 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 RNU7-40P-201ENST00000516397 64 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 RNU6-966P-201ENST00000516479 104 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 SNORA40.14-201ENST00000516543 86 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 AC010205.1-201ENST00000616668 449 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 uc_338.22-201ENST00000622722 187 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 AC127459.3-201ENST00000624328 466 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 Y_RNA.80-201ENST00000362996 102 ntBASIC1.2□□□□□ -2.22
PTPN4P29074 Y_RNA.191-201ENST00000363972 113 ntBASIC1.2□□□□□ -2.22
PTPN4P29074 Y_RNA.395-201ENST00000383945 109 ntBASIC1.2□□□□□ -2.22
PTPN4P29074 Y_RNA.485-201ENST00000384395 102 ntBASIC1.2□□□□□ -2.22
PTPN4P29074 RNU6-376P-201ENST00000384731 106 ntBASIC1.2□□□□□ -2.22
PTPN4P29074 AL031003.1-201ENST00000404229 172 ntBASIC1.2□□□□□ -2.22
PTPN4P29074 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.2□□□□□ -2.22
PTPN4P29074 AL160004.2-201ENST00000432935 350 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms